RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 MMP1P03956 469 aa15.37■□□□□ 0.05
TNFRSF1A-202ENST00000366159 ITGB1P05556 798 aa15.37■□□□□ 0.05
TNFRSF1A-202ENST00000366159 DARSP14868 501 aaKnown RBP15.37■□□□□ 0.05
TNFRSF1A-202ENST00000366159 DNAJB1P25685 340 aa15.37■□□□□ 0.05
TNFRSF1A-202ENST00000366159 PSMC5P62195 406 aa15.37■□□□□ 0.05
TNFRSF1A-202ENST00000366159 CTC1Q2NKJ3 1217 aa15.37■□□□□ 0.05
TNFRSF1A-202ENST00000366159 FAM102BQ5T8I3 360 aa15.37■□□□□ 0.05
TNFRSF1A-202ENST00000366159 SPPL3Q8TCT6 385 aa15.37■□□□□ 0.05
TNFRSF1A-202ENST00000366159 PABPC5Q96DU9 382 aaKnown RBP15.37■□□□□ 0.05
TNFRSF1A-202ENST00000366159 NAP1L4Q99733 375 aaKnown RBP15.37■□□□□ 0.05
TNFRSF1A-202ENST00000366159 SH2D3AQ9BRG2 576 aa15.37■□□□□ 0.05
TNFRSF1A-202ENST00000366159 RNF19AQ9NV58 838 aa15.37■□□□□ 0.05
TNFRSF1A-202ENST00000366159 TMEM161AQ9NX61 479 aa15.37■□□□□ 0.05
TNFRSF1A-202ENST00000366159 WRAP73Q9P2S5 460 aaPredicted RBP15.37■□□□□ 0.05
TNFRSF1A-202ENST00000366159 CCNT1O60563 726 aaKnown RBP15.36■□□□□ 0.05
TNFRSF1A-202ENST00000366159 JAK2O60674 1132 aa15.36■□□□□ 0.05
TNFRSF1A-202ENST00000366159 KRT2P35908 639 aa15.36■□□□□ 0.05
TNFRSF1A-202ENST00000366159 LTBRP36941 435 aa15.36■□□□□ 0.05
TNFRSF1A-202ENST00000366159 QARSP47897 775 aaKnown RBP15.36■□□□□ 0.05
TNFRSF1A-202ENST00000366159 CDC42EP1Q00587 391 aa15.36■□□□□ 0.05
TNFRSF1A-202ENST00000366159 MTERF2Q49AM1 385 aa15.36■□□□□ 0.05
TNFRSF1A-202ENST00000366159 PAN2Q504Q3 1202 aaKnown RBP15.36■□□□□ 0.05
TNFRSF1A-202ENST00000366159 POTEDQ86YR6 584 aa15.36■□□□□ 0.05
TNFRSF1A-202ENST00000366159 KLHL23Q8NBE8 558 aa15.36■□□□□ 0.05
TNFRSF1A-202ENST00000366159 KIF2CQ99661 725 aa15.36■□□□□ 0.05
TNFRSF1A-202ENST00000366159 ALG13Q9NP73 1137 aaKnown RBP15.36■□□□□ 0.05
TNFRSF1A-202ENST00000366159 SEPT9Q9UHD8 586 aaPredicted RBP15.36■□□□□ 0.05
TNFRSF1A-202ENST00000366159 LRFN2Q9ULH4 789 aa15.36■□□□□ 0.05
TNFRSF1A-202ENST00000366159 MYO7AQ13402 2215 aa15.36■□□□□ 0.05
TNFRSF1A-202ENST00000366159 DDX11L8A8MPP1 907 aa15.35■□□□□ 0.05
TNFRSF1A-202ENST00000366159 BTBD18B2RXH4 712 aa15.35■□□□□ 0.05
TNFRSF1A-202ENST00000366159 CENPBP07199 599 aaPredicted RBP15.35■□□□□ 0.05
TNFRSF1A-202ENST00000366159 P4HBP07237 508 aaKnown RBP15.35■□□□□ 0.05
TNFRSF1A-202ENST00000366159 KCNA5P22460 613 aa15.35■□□□□ 0.05
TNFRSF1A-202ENST00000366159 HYAL1Q12794 435 aa15.35■□□□□ 0.05
TNFRSF1A-202ENST00000366159 EPHA7Q15375 998 aa15.35■□□□□ 0.05
TNFRSF1A-202ENST00000366159 ZNF579Q8NAF0 562 aaKnown RBP15.35■□□□□ 0.05
TNFRSF1A-202ENST00000366159 ZNF668Q96K58 619 aaPredicted RBP15.35■□□□□ 0.05
TNFRSF1A-202ENST00000366159 CWH43Q9H720 699 aa15.35■□□□□ 0.05
TNFRSF1A-202ENST00000366159 TBKBP1A7MCY6 615 aa15.34■□□□□ 0.05
TNFRSF1A-202ENST00000366159 WNT7AO00755 349 aa15.34■□□□□ 0.05
TNFRSF1A-202ENST00000366159 NCK2O43639 380 aa15.34■□□□□ 0.05
TNFRSF1A-202ENST00000366159 FGFR1P11362 822 aa15.34■□□□□ 0.05
TNFRSF1A-202ENST00000366159 C8orf34Q49A92 452 aa15.34■□□□□ 0.05
TNFRSF1A-202ENST00000366159 PLA2G4FQ68DD2 849 aa15.34■□□□□ 0.05
TNFRSF1A-202ENST00000366159 LRRC55Q6ZSA7 311 aa15.34■□□□□ 0.05
TNFRSF1A-202ENST00000366159 ZNF598Q86UK7 904 aaKnown RBP15.34■□□□□ 0.05
TNFRSF1A-202ENST00000366159 ECHDC2Q86YB7 292 aa15.34■□□□□ 0.05
TNFRSF1A-202ENST00000366159 C4orf19Q8IY42 314 aa15.34■□□□□ 0.05
TNFRSF1A-202ENST00000366159 CASD1Q96PB1 797 aa15.34■□□□□ 0.05
TNFRSF1A-202ENST00000366159 TRAIPQ9BWF2 469 aa15.34■□□□□ 0.05
TNFRSF1A-202ENST00000366159 DHX33Q9H6R0 707 aaKnown RBP15.34■□□□□ 0.05
TNFRSF1A-202ENST00000366159 CYP26B1Q9NR63 512 aa15.34■□□□□ 0.05
TNFRSF1A-202ENST00000366159 TYW1Q9NV66 732 aaKnown RBP15.34■□□□□ 0.05
TNFRSF1A-202ENST00000366159 PPME1Q9Y570 386 aa15.34■□□□□ 0.05
TNFRSF1A-202ENST00000366159 PLXNA4Q9HCM2 1894 aa15.34■□□□□ 0.05
TNFRSF1A-202ENST00000366159 C5orf42Q9H799 3197 aa15.33■□□□□ 0.05
TNFRSF1A-202ENST00000366159 A0A087WZ62 844 aa15.33■□□□□ 0.04
TNFRSF1A-202ENST00000366159 A0A0U1RQF3 1178 aa15.33■□□□□ 0.04
TNFRSF1A-202ENST00000366159 GRXCR2A6NFK2 248 aa15.33■□□□□ 0.04
TNFRSF1A-202ENST00000366159 CSDE1O75534 798 aaKnown RBP15.33■□□□□ 0.04
TNFRSF1A-202ENST00000366159 ZSCAN20P17040 1043 aaPredicted RBP15.33■□□□□ 0.04
TNFRSF1A-202ENST00000366159 FGFR4P22455 802 aa15.33■□□□□ 0.04
TNFRSF1A-202ENST00000366159 DNM2P50570 870 aa15.33■□□□□ 0.04
TNFRSF1A-202ENST00000366159 NPEPPSP55786 919 aa15.33■□□□□ 0.04
TNFRSF1A-202ENST00000366159 ZNF410Q86VK4 478 aa15.33■□□□□ 0.04
TNFRSF1A-202ENST00000366159 DIS3L2Q8IYB7 885 aaKnown RBP15.33■□□□□ 0.04
TNFRSF1A-202ENST00000366159 SLFN12Q8IYM2 578 aa15.33■□□□□ 0.04
TNFRSF1A-202ENST00000366159 POF1BQ8WVV4 589 aa15.33■□□□□ 0.04
TNFRSF1A-202ENST00000366159 NLRP7Q8WX94 980 aa15.33■□□□□ 0.04
TNFRSF1A-202ENST00000366159 MTMR9Q96QG7 549 aa15.33■□□□□ 0.04
TNFRSF1A-202ENST00000366159 HSD17B14Q9BPX1 270 aa15.33■□□□□ 0.04
TNFRSF1A-202ENST00000366159 FDXACB1Q9BRP7 624 aaPredicted RBP15.33■□□□□ 0.04
TNFRSF1A-202ENST00000366159 ATP6V0A4Q9HBG4 840 aa15.33■□□□□ 0.04
TNFRSF1A-202ENST00000366159 CD320Q9NPF0 282 aa15.33■□□□□ 0.04
TNFRSF1A-202ENST00000366159 CHST12Q9NRB3 414 aa15.33■□□□□ 0.04
TNFRSF1A-202ENST00000366159 SUCLA2Q9P2R7 463 aaPredicted RBP15.33■□□□□ 0.04
TNFRSF1A-202ENST00000366159 HCSTQ9UBK5 93 aa15.33■□□□□ 0.04
TNFRSF1A-202ENST00000366159 LIMCH1Q9UPQ0 1083 aa15.33■□□□□ 0.04
TNFRSF1A-202ENST00000366159 DKC1O60832 514 aaKnown RBP eCLIP15.32■□□□□ 0.04
TNFRSF1A-202ENST00000366159 SLITRK3O94933 977 aa15.32■□□□□ 0.04
TNFRSF1A-202ENST00000366159 ATF7P17544 494 aaPredicted RBP15.32■□□□□ 0.04
TNFRSF1A-202ENST00000366159 GTF2F1P35269 517 aaKnown RBP eCLIP15.32■□□□□ 0.041e-6■■■■□ 22.9
TNFRSF1A-202ENST00000366159 IRS1P35568 1242 aa15.32■□□□□ 0.04
TNFRSF1A-202ENST00000366159 ADAM15Q13444 863 aa15.32■□□□□ 0.04
TNFRSF1A-202ENST00000366159 PUS10Q3MIT2 529 aaKnown RBP15.32■□□□□ 0.04
TNFRSF1A-202ENST00000366159 FAM178BQ8IXR5 827 aa15.32■□□□□ 0.04
TNFRSF1A-202ENST00000366159 DYDC2Q96IM9 177 aa15.32■□□□□ 0.04
TNFRSF1A-202ENST00000366159 JPH2Q9BR39 696 aaPredicted RBP15.32■□□□□ 0.04
TNFRSF1A-202ENST00000366159 LXNQ9BS40 222 aa15.32■□□□□ 0.04
TNFRSF1A-202ENST00000366159 GCOM2Q9BZD3 368 aaPredicted RBP15.32■□□□□ 0.04
TNFRSF1A-202ENST00000366159 TMEM117Q9H0C3 514 aa15.32■□□□□ 0.04
TNFRSF1A-202ENST00000366159 IFT122Q9HBG6 1241 aa15.32■□□□□ 0.04
TNFRSF1A-202ENST00000366159 BRMS1Q9HCU9 246 aa15.32■□□□□ 0.04
TNFRSF1A-202ENST00000366159 RGL1Q9NZL6 768 aa15.32■□□□□ 0.04
TNFRSF1A-202ENST00000366159 H3BQ06 376 aaPredicted RBP15.31■□□□□ 0.04
TNFRSF1A-202ENST00000366159 ZBTB39O15060 712 aa15.31■□□□□ 0.04
TNFRSF1A-202ENST00000366159 LYPLA2O95372 231 aa15.31■□□□□ 0.04
TNFRSF1A-202ENST00000366159 BAG4O95429 457 aaKnown RBP15.31■□□□□ 0.04
TNFRSF1A-202ENST00000366159 EOMESO95936 686 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms