RNA–Protein interactions for RNA: ENST00000361901.6

CALD1-202, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,114 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-202ENST00000361901 VWA5AO00534 786 aa9.97□□□□□ -0.81
CALD1-202ENST00000361901 TPD52L2O43399 206 aaKnown RBP9.97□□□□□ -0.81
CALD1-202ENST00000361901 SLC8A1P32418 973 aa9.97□□□□□ -0.81
CALD1-202ENST00000361901 SNX1Q13596 522 aa9.97□□□□□ -0.81
CALD1-202ENST00000361901 VGLL4Q14135 290 aa9.97□□□□□ -0.81
CALD1-202ENST00000361901 NT5DC1Q5TFE4 455 aa9.97□□□□□ -0.81
CALD1-202ENST00000361901 FAM186BQ8IYM0 893 aa9.97□□□□□ -0.81
CALD1-202ENST00000361901 SPDYE1Q8NFV5 336 aaPredicted RBP9.97□□□□□ -0.81
CALD1-202ENST00000361901 PARD3BQ8TEW8 1205 aa9.97□□□□□ -0.81
CALD1-202ENST00000361901 WNK4Q96J92 1243 aa9.97□□□□□ -0.81
CALD1-202ENST00000361901 WDR18Q9BV38 432 aa9.97□□□□□ -0.81
CALD1-202ENST00000361901 NUP58Q9BVL2 599 aa9.97□□□□□ -0.81
CALD1-202ENST00000361901 RMI1Q9H9A7 625 aa9.97□□□□□ -0.81
CALD1-202ENST00000361901 GPRC5CQ9NQ84 441 aa9.97□□□□□ -0.81
CALD1-202ENST00000361901 ANKFY1Q9P2R3 1169 aa9.97□□□□□ -0.81
CALD1-202ENST00000361901 CNTNAP1P78357 1384 aa9.97□□□□□ -0.81
CALD1-202ENST00000361901 BUB1O43683 1085 aa9.97□□□□□ -0.81
CALD1-202ENST00000361901 HIP1RO75146 1068 aa9.97□□□□□ -0.81
CALD1-202ENST00000361901 P4HBP07237 508 aaKnown RBP9.97□□□□□ -0.81
CALD1-202ENST00000361901 EPHX2P34913 555 aa9.97□□□□□ -0.81
CALD1-202ENST00000361901 LRRC63Q05C16 580 aa9.97□□□□□ -0.81
CALD1-202ENST00000361901 KLC4Q9NSK0 619 aa9.97□□□□□ -0.81
CALD1-202ENST00000361901 C4AP0C0L4 1744 aa9.97□□□□□ -0.81
CALD1-202ENST00000361901 UBR3Q6ZT12 1888 aa9.97□□□□□ -0.81
CALD1-202ENST00000361901 C19orf81C9J6K1 198 aa9.97□□□□□ -0.81
CALD1-202ENST00000361901 HNRNPDLO14979 420 aaKnown RBP9.97□□□□□ -0.81
CALD1-202ENST00000361901 LRRN2O75325 713 aa9.97□□□□□ -0.81
CALD1-202ENST00000361901 EYA4O95677 639 aa9.97□□□□□ -0.81
CALD1-202ENST00000361901 SOX10P56693 466 aa9.97□□□□□ -0.81
CALD1-202ENST00000361901 CNTN2Q02246 1040 aa9.97□□□□□ -0.81
CALD1-202ENST00000361901 STXBP2Q15833 593 aa9.97□□□□□ -0.81
CALD1-202ENST00000361901 EXOC3L4Q17RC7 722 aa9.97□□□□□ -0.81
CALD1-202ENST00000361901 TKFCQ3LXA3 575 aa9.97□□□□□ -0.81
CALD1-202ENST00000361901 SFMBT2Q5VUG0 894 aa9.97□□□□□ -0.81
CALD1-202ENST00000361901 DPP9Q86TI2 863 aa9.97□□□□□ -0.81
CALD1-202ENST00000361901 TRIM74Q86UV6 250 aa9.97□□□□□ -0.81
CALD1-202ENST00000361901 TRIM73Q86UV7 250 aa9.97□□□□□ -0.81
CALD1-202ENST00000361901 FAM133AQ8N9E0 248 aa9.97□□□□□ -0.81
CALD1-202ENST00000361901 POMGNT1Q8WZA1 660 aa9.97□□□□□ -0.81
CALD1-202ENST00000361901 KIFC3Q9BVG8 833 aa9.97□□□□□ -0.81
CALD1-202ENST00000361901 IFIH1Q9BYX4 1025 aaKnown RBP9.97□□□□□ -0.81
CALD1-202ENST00000361901 L2HGDHQ9H9P8 463 aa9.97□□□□□ -0.81
CALD1-202ENST00000361901 ABHD10Q9NUJ1 306 aa9.97□□□□□ -0.81
CALD1-202ENST00000361901 BCORQ6W2J9 1755 aa9.96□□□□□ -0.81
CALD1-202ENST00000361901 WDR64B1ANS9 1081 aa9.96□□□□□ -0.81
CALD1-202ENST00000361901 GYPCP04921 128 aa9.96□□□□□ -0.81
CALD1-202ENST00000361901 TRIM49P0CI25 452 aa9.96□□□□□ -0.81
CALD1-202ENST00000361901 TRIM49CP0CI26 452 aa9.96□□□□□ -0.81
CALD1-202ENST00000361901 ZNF18P17022 549 aa9.96□□□□□ -0.81
CALD1-202ENST00000361901 MCM3P25205 808 aa9.96□□□□□ -0.81
CALD1-202ENST00000361901 DMP1Q13316 513 aaPredicted RBP9.96□□□□□ -0.81
CALD1-202ENST00000361901 EPHA7Q15375 998 aa9.96□□□□□ -0.81
CALD1-202ENST00000361901 KNOP1Q1ED39 458 aaKnown RBP9.96□□□□□ -0.81
CALD1-202ENST00000361901 SLC9C1Q4G0N8 1177 aa9.96□□□□□ -0.81
CALD1-202ENST00000361901 DPH6Q7L8W6 267 aa9.96□□□□□ -0.81
CALD1-202ENST00000361901 PNMA8AQ86V59 439 aaPredicted RBP9.96□□□□□ -0.81
CALD1-202ENST00000361901 KLHL23Q8NBE8 558 aa9.96□□□□□ -0.81
CALD1-202ENST00000361901 IKZF4Q9H2S9 585 aa9.96□□□□□ -0.81
CALD1-202ENST00000361901 KMT5AQ9NQR1 393 aa9.96□□□□□ -0.81
CALD1-202ENST00000361901 INTS13Q9NVM9 706 aa9.96□□□□□ -0.81
CALD1-202ENST00000361901 PHLPP2Q6ZVD8 1323 aa9.96□□□□□ -0.81
CALD1-202ENST00000361901 TMEM110-MUSTN1A8MSY1 372 aa9.96□□□□□ -0.82
CALD1-202ENST00000361901 KLRC4O43908 158 aa9.96□□□□□ -0.82
CALD1-202ENST00000361901 NR3C1P04150 777 aa9.96□□□□□ -0.82
CALD1-202ENST00000361901 KCNA1Q09470 495 aa9.96□□□□□ -0.82
CALD1-202ENST00000361901 ASIC2Q16515 512 aa9.96□□□□□ -0.82
CALD1-202ENST00000361901 ODF2Q5BJF6 829 aa9.96□□□□□ -0.82
CALD1-202ENST00000361901 TTI2Q6NXR4 508 aa9.96□□□□□ -0.82
CALD1-202ENST00000361901 CCDC26Q8TAB7 109 aa9.96□□□□□ -0.82
CALD1-202ENST00000361901 ATP6V0A1Q93050 837 aa9.96□□□□□ -0.82
CALD1-202ENST00000361901 MED15Q96RN5 788 aa9.96□□□□□ -0.82
CALD1-202ENST00000361901 FNBP1Q96RU3 617 aa9.96□□□□□ -0.82
CALD1-202ENST00000361901 RANBP17Q9H2T7 1088 aaKnown RBP9.96□□□□□ -0.82
CALD1-202ENST00000361901 BCAS3Q9H6U6 928 aa9.96□□□□□ -0.82
CALD1-202ENST00000361901 TNNI1P19237 187 aa9.96□□□□□ -0.82
CALD1-202ENST00000361901 YWHABP31946 246 aaKnown RBP9.96□□□□□ -0.82
CALD1-202ENST00000361901 KCNH2Q12809 1159 aa9.96□□□□□ -0.82
CALD1-202ENST00000361901 STRN3Q13033 797 aa9.96□□□□□ -0.82
CALD1-202ENST00000361901 HHATQ5VTY9 493 aa9.96□□□□□ -0.82
CALD1-202ENST00000361901 RINT1Q6NUQ1 792 aa9.96□□□□□ -0.82
CALD1-202ENST00000361901 SLC35F6Q8N357 371 aa9.96□□□□□ -0.82
CALD1-202ENST00000361901 DEPTORQ8TB45 409 aa9.96□□□□□ -0.82
CALD1-202ENST00000361901 TAF4BQ92750 862 aa9.96□□□□□ -0.82
CALD1-202ENST00000361901 P2RX7Q99572 595 aaKnown RBP9.96□□□□□ -0.82
CALD1-202ENST00000361901 TBC1D22BQ9NU19 505 aa9.96□□□□□ -0.82
CALD1-202ENST00000361901 FAM53CQ9NYF3 392 aa9.96□□□□□ -0.82
CALD1-202ENST00000361901 LIMA1Q9UHB6 759 aaKnown RBP9.96□□□□□ -0.82
CALD1-202ENST00000361901 PLIN4Q96Q06 1357 aa9.95□□□□□ -0.82
CALD1-202ENST00000361901 TBX3O15119 743 aa9.95□□□□□ -0.82
CALD1-202ENST00000361901 TBC1D12O60347 775 aa9.95□□□□□ -0.82
CALD1-202ENST00000361901 SRGAP2CP0DJJ0 459 aa9.95□□□□□ -0.82
CALD1-202ENST00000361901 ABCB4P21439 1286 aa9.95□□□□□ -0.82
CALD1-202ENST00000361901 APBA1Q02410 837 aa9.95□□□□□ -0.82
CALD1-202ENST00000361901 IFT88Q13099 833 aa9.95□□□□□ -0.82
CALD1-202ENST00000361901 ELOA2Q8IYF1 753 aaPredicted RBP9.95□□□□□ -0.82
CALD1-202ENST00000361901 PDCD2LQ9BRP1 358 aa9.95□□□□□ -0.82
CALD1-202ENST00000361901 TPX2Q9ULW0 747 aaKnown RBP9.95□□□□□ -0.82
CALD1-202ENST00000361901 ACTN1P12814 892 aa9.95□□□□□ -0.82
CALD1-202ENST00000361901 KRT5P13647 590 aa9.95□□□□□ -0.82
CALD1-202ENST00000361901 ITGB5P18084 799 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms