RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 ELF1P32519 619 aa14.96□□□□□ -0.01
COL6A1-201ENST00000361866 KIAA1755Q5JYT7 1200 aa14.96□□□□□ -0.01
COL6A1-201ENST00000361866 ZNF713Q8N859 430 aaPredicted RBP14.96□□□□□ -0.01
COL6A1-201ENST00000361866 P3H4Q92791 437 aa14.96□□□□□ -0.01
COL6A1-201ENST00000361866 CCDC17Q96LX7 622 aa14.96□□□□□ -0.01
COL6A1-201ENST00000361866 FAM118BQ9BPY3 351 aa14.96□□□□□ -0.01
COL6A1-201ENST00000361866 ISCUQ9H1K1 167 aa14.96□□□□□ -0.01
COL6A1-201ENST00000361866 ANKFY1Q9P2R3 1169 aa14.96□□□□□ -0.01
COL6A1-201ENST00000361866 DIAPH2O60879 1101 aa14.96□□□□□ -0.02
COL6A1-201ENST00000361866 BMP3P12645 472 aa14.96□□□□□ -0.02
COL6A1-201ENST00000361866 ITGA4P13612 1032 aa14.96□□□□□ -0.02
COL6A1-201ENST00000361866 MTM1Q13496 603 aa14.96□□□□□ -0.02
COL6A1-201ENST00000361866 SDCCAG8Q86SQ7 713 aaPredicted RBP14.96□□□□□ -0.02
COL6A1-201ENST00000361866 SPATS2LQ9NUQ6 558 aaKnown RBP14.96□□□□□ -0.02
COL6A1-201ENST00000361866 MAD2L2Q9UI95 211 aa14.96□□□□□ -0.02
COL6A1-201ENST00000361866 ANAPC4Q9UJX5 808 aa14.96□□□□□ -0.02
COL6A1-201ENST00000361866 GINS2Q9Y248 185 aa14.96□□□□□ -0.02
COL6A1-201ENST00000361866 SPAG7O75391 227 aa14.95□□□□□ -0.02
COL6A1-201ENST00000361866 SSTR3P32745 418 aaPredicted RBP14.95□□□□□ -0.02
COL6A1-201ENST00000361866 PEX3P56589 373 aa14.95□□□□□ -0.02
COL6A1-201ENST00000361866 GPC5P78333 572 aa14.95□□□□□ -0.02
COL6A1-201ENST00000361866 ZC2HC1CQ53FD0 456 aaPredicted RBP14.95□□□□□ -0.02
COL6A1-201ENST00000361866 CENPPQ6IPU0 288 aa14.95□□□□□ -0.02
COL6A1-201ENST00000361866 CLEC4GQ6UXB4 293 aa14.95□□□□□ -0.02
COL6A1-201ENST00000361866 TXNRD3Q86VQ6 643 aa14.95□□□□□ -0.02
COL6A1-201ENST00000361866 PASD1Q8IV76 773 aa14.95□□□□□ -0.02
COL6A1-201ENST00000361866 PDCD7Q8N8D1 485 aaKnown RBP14.95□□□□□ -0.02
COL6A1-201ENST00000361866 GLIS3Q8NEA6 775 aa14.95□□□□□ -0.02
COL6A1-201ENST00000361866 GBP5Q96PP8 586 aa14.95□□□□□ -0.02
COL6A1-201ENST00000361866 MED15Q96RN5 788 aa14.95□□□□□ -0.02
COL6A1-201ENST00000361866 ECT2Q9H8V3 914 aa14.95□□□□□ -0.02
COL6A1-201ENST00000361866 NAGPAQ9UK23 515 aa14.95□□□□□ -0.02
COL6A1-201ENST00000361866 SYNGAP1Q96PV0 1343 aa14.95□□□□□ -0.02
COL6A1-201ENST00000361866 PLEKHG2Q9H7P9 1386 aa14.95□□□□□ -0.02
COL6A1-201ENST00000361866 A0A0G2JND7 137 aa14.95□□□□□ -0.02
COL6A1-201ENST00000361866 LIG4P49917 911 aa14.95□□□□□ -0.02
COL6A1-201ENST00000361866 USP11P51784 963 aa14.95□□□□□ -0.02
COL6A1-201ENST00000361866 YWHAGP61981 247 aaKnown RBP eCLIP14.95□□□□□ -0.02
COL6A1-201ENST00000361866 BYSLQ13895 437 aaKnown RBP14.95□□□□□ -0.02
COL6A1-201ENST00000361866 CHURC1Q8WUH1 139 aa14.95□□□□□ -0.02
COL6A1-201ENST00000361866 DYDC2Q96IM9 177 aa14.95□□□□□ -0.02
COL6A1-201ENST00000361866 REEP2Q9BRK0 252 aa14.95□□□□□ -0.02
COL6A1-201ENST00000361866 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.95□□□□□ -0.02
COL6A1-201ENST00000361866 ATMINO43313 823 aaPredicted RBP14.95□□□□□ -0.02
COL6A1-201ENST00000361866 MSH2P43246 934 aa14.95□□□□□ -0.02
COL6A1-201ENST00000361866 POLE2P56282 527 aa14.95□□□□□ -0.02
COL6A1-201ENST00000361866 PDIA5Q14554 519 aa14.95□□□□□ -0.02
COL6A1-201ENST00000361866 PSMD6Q15008 389 aa14.95□□□□□ -0.02
COL6A1-201ENST00000361866 NKX1-1Q15270 411 aaPredicted RBP14.95□□□□□ -0.02
COL6A1-201ENST00000361866 KDM7AQ6ZMT4 941 aa14.95□□□□□ -0.02
COL6A1-201ENST00000361866 CEP128Q6ZU80 1094 aa14.95□□□□□ -0.02
COL6A1-201ENST00000361866 TRIM59Q8IWR1 403 aa14.95□□□□□ -0.02
COL6A1-201ENST00000361866 FGFR1OP2Q9NVK5 253 aa14.95□□□□□ -0.02
COL6A1-201ENST00000361866 SUFUQ9UMX1 484 aa14.95□□□□□ -0.02
COL6A1-201ENST00000361866 CYB5D1Q6P9G0 228 aa14.94□□□□□ -0.02
COL6A1-201ENST00000361866 RNF207Q6ZRF8 634 aa14.94□□□□□ -0.02
COL6A1-201ENST00000361866 NLRX1Q86UT6 975 aa14.94□□□□□ -0.02
COL6A1-201ENST00000361866 RAPGEF5Q92565 580 aa14.94□□□□□ -0.02
COL6A1-201ENST00000361866 RNF25Q96BH1 459 aaPredicted RBP14.94□□□□□ -0.02
COL6A1-201ENST00000361866 C9orf72Q96LT7 481 aa14.94□□□□□ -0.02
COL6A1-201ENST00000361866 TGS1Q96RS0 853 aaKnown RBP14.94□□□□□ -0.02
COL6A1-201ENST00000361866 CSRNP1Q96S65 589 aa14.94□□□□□ -0.02
COL6A1-201ENST00000361866 SAYSD1Q9NPB0 183 aa14.94□□□□□ -0.02
COL6A1-201ENST00000361866 SLIT1O75093 1534 aa14.94□□□□□ -0.02
COL6A1-201ENST00000361866 AMPD2Q01433 879 aa14.94□□□□□ -0.02
COL6A1-201ENST00000361866 RASA3Q14644 834 aa14.94□□□□□ -0.02
COL6A1-201ENST00000361866 NUDT12Q9BQG2 462 aa14.94□□□□□ -0.02
COL6A1-201ENST00000361866 STAMBPO95630 424 aa14.94□□□□□ -0.02
COL6A1-201ENST00000361866 SOX5P35711 763 aa14.94□□□□□ -0.02
COL6A1-201ENST00000361866 GRAPQ13588 217 aa14.94□□□□□ -0.02
COL6A1-201ENST00000361866 BBS9Q3SYG4 887 aa14.94□□□□□ -0.02
COL6A1-201ENST00000361866 AP1ARQ63HQ0 302 aa14.94□□□□□ -0.02
COL6A1-201ENST00000361866 SCYL2Q6P3W7 929 aa14.94□□□□□ -0.02
COL6A1-201ENST00000361866 ARHGAP24Q8N264 748 aa14.94□□□□□ -0.02
COL6A1-201ENST00000361866 GRAPLQ8TC17 118 aaPredicted RBP14.94□□□□□ -0.02
COL6A1-201ENST00000361866 AENQ8WTP8 325 aaKnown RBP14.94□□□□□ -0.02
COL6A1-201ENST00000361866 IWS1Q96ST2 819 aa14.94□□□□□ -0.02
COL6A1-201ENST00000361866 PCDHB4Q9Y5E5 795 aa14.94□□□□□ -0.02
COL6A1-201ENST00000361866 CAMTA2O94983 1202 aa14.93□□□□□ -0.02
COL6A1-201ENST00000361866 AARSP49588 968 aaKnown RBP eCLIP14.93□□□□□ -0.02
COL6A1-201ENST00000361866 ZNF394Q53GI3 561 aa14.93□□□□□ -0.02
COL6A1-201ENST00000361866 RFX8Q6ZV50 586 aa14.93□□□□□ -0.02
COL6A1-201ENST00000361866 SLC30A5Q8TAD4 765 aa14.93□□□□□ -0.02
COL6A1-201ENST00000361866 SGSM3Q96HU1 749 aa14.93□□□□□ -0.02
COL6A1-201ENST00000361866 NUP85Q9BW27 656 aa14.93□□□□□ -0.02
COL6A1-201ENST00000361866 INTS2Q9H0H0 1204 aaKnown RBP14.93□□□□□ -0.02
COL6A1-201ENST00000361866 OSGEPQ9NPF4 335 aa14.93□□□□□ -0.02
COL6A1-201ENST00000361866 DLG5Q8TDM6 1919 aa14.93□□□□□ -0.02
COL6A1-201ENST00000361866 LRRIQ4A6NIV6 560 aa14.93□□□□□ -0.02
COL6A1-201ENST00000361866 DMP1Q13316 513 aaPredicted RBP14.93□□□□□ -0.02
COL6A1-201ENST00000361866 NFIXQ14938 502 aa14.93□□□□□ -0.02
COL6A1-201ENST00000361866 TRADDQ15628 312 aa14.93□□□□□ -0.02
COL6A1-201ENST00000361866 GNPTABQ3T906 1256 aa14.93□□□□□ -0.02
COL6A1-201ENST00000361866 TTMPQ5BVD1 217 aa14.93□□□□□ -0.02
COL6A1-201ENST00000361866 ZNF564Q8TBZ8 553 aaPredicted RBP14.93□□□□□ -0.02
COL6A1-201ENST00000361866 TSNARE1Q96NA8 513 aa14.93□□□□□ -0.02
COL6A1-201ENST00000361866 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.93□□□□□ -0.02
COL6A1-201ENST00000361866 CCPG1Q9ULG6 757 aa14.93□□□□□ -0.02
COL6A1-201ENST00000361866 C1orf167Q5SNV9 1468 aa14.93□□□□□ -0.02
COL6A1-201ENST00000361866 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms