RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 FLRT1Q9NZU1 646 aa14.47□□□□□ -0.09
SQSTM1-201ENST00000360718 BACH1O14867 736 aa14.46□□□□□ -0.09
SQSTM1-201ENST00000360718 FAM13AO94988 1023 aa14.46□□□□□ -0.09
SQSTM1-201ENST00000360718 ATG7O95352 703 aa14.46□□□□□ -0.09
SQSTM1-201ENST00000360718 GYPCP04921 128 aa14.46□□□□□ -0.09
SQSTM1-201ENST00000360718 RARRES1P49788 294 aa14.46□□□□□ -0.09
SQSTM1-201ENST00000360718 CHMP4BP1P59074 171 aa14.46□□□□□ -0.09
SQSTM1-201ENST00000360718 CAP1Q01518 475 aa14.46□□□□□ -0.09
SQSTM1-201ENST00000360718 ZNF569Q5MCW4 686 aa14.46□□□□□ -0.09
SQSTM1-201ENST00000360718 PLA2G4FQ68DD2 849 aa14.46□□□□□ -0.09
SQSTM1-201ENST00000360718 ANO5Q75V66 913 aa14.46□□□□□ -0.09
SQSTM1-201ENST00000360718 P2RX5Q93086 422 aa14.46□□□□□ -0.09
SQSTM1-201ENST00000360718 PCYT2Q99447 389 aa14.46□□□□□ -0.09
SQSTM1-201ENST00000360718 ARHGAP39Q9C0H5 1083 aa14.46□□□□□ -0.09
SQSTM1-201ENST00000360718 MLXIPQ9HAP2 919 aa14.46□□□□□ -0.09
SQSTM1-201ENST00000360718 ANKEF1Q9NU02 776 aa14.46□□□□□ -0.09
SQSTM1-201ENST00000360718 TBC1D7Q9P0N9 293 aa14.46□□□□□ -0.09
SQSTM1-201ENST00000360718 DIS3Q9Y2L1 958 aaKnown RBP14.46□□□□□ -0.09
SQSTM1-201ENST00000360718 PCDHA2Q9Y5H9 948 aa14.46□□□□□ -0.09
SQSTM1-201ENST00000360718 HTTP42858 3142 aa14.46□□□□□ -0.09
SQSTM1-201ENST00000360718 CCDC151A5D8V7 595 aa14.46□□□□□ -0.09
SQSTM1-201ENST00000360718 TRIM49BA6NDI0 452 aa14.46□□□□□ -0.09
SQSTM1-201ENST00000360718 SFI1A8K8P3 1242 aa14.46□□□□□ -0.09
SQSTM1-201ENST00000360718 KCNJ18B7U540 433 aa14.46□□□□□ -0.09
SQSTM1-201ENST00000360718 SUPT20HL2P0C7V6 817 aa14.46□□□□□ -0.09
SQSTM1-201ENST00000360718 ATP4AP20648 1035 aa14.46□□□□□ -0.09
SQSTM1-201ENST00000360718 CCNE1P24864 410 aa14.46□□□□□ -0.09
SQSTM1-201ENST00000360718 NPEPPSP55786 919 aa14.46□□□□□ -0.09
SQSTM1-201ENST00000360718 KCNJ12Q14500 433 aa14.46□□□□□ -0.09
SQSTM1-201ENST00000360718 LRRC41Q15345 812 aa14.46□□□□□ -0.09
SQSTM1-201ENST00000360718 HSDL1Q3SXM5 330 aa14.46□□□□□ -0.09
SQSTM1-201ENST00000360718 TCP11X2Q5H9J9 407 aa14.46□□□□□ -0.09
SQSTM1-201ENST00000360718 PADI6Q6TGC4 694 aa14.46□□□□□ -0.09
SQSTM1-201ENST00000360718 MYOCDQ8IZQ8 938 aa14.46□□□□□ -0.09
SQSTM1-201ENST00000360718 USP6NLQ92738 828 aa14.46□□□□□ -0.09
SQSTM1-201ENST00000360718 TRIM47Q96LD4 638 aa14.46□□□□□ -0.09
SQSTM1-201ENST00000360718 ODF2LQ9ULJ1 636 aa14.46□□□□□ -0.09
SQSTM1-201ENST00000360718 TXNP10599 105 aaKnown RBP14.45□□□□□ -0.1
SQSTM1-201ENST00000360718 FXR1P51114 621 aaKnown RBP eCLIP14.45□□□□□ -0.1
SQSTM1-201ENST00000360718 MAP2K5Q13163 448 aa14.45□□□□□ -0.1
SQSTM1-201ENST00000360718 TTLL4Q14679 1199 aa14.45□□□□□ -0.1
SQSTM1-201ENST00000360718 CCL14Q16627 93 aa14.45□□□□□ -0.1
SQSTM1-201ENST00000360718 CELF3Q5SZQ8 465 aaKnown RBP14.45□□□□□ -0.1
SQSTM1-201ENST00000360718 METTL7BQ6UX53 244 aa14.45□□□□□ -0.1
SQSTM1-201ENST00000360718 SCFD2Q8WU76 684 aa14.45□□□□□ -0.1
SQSTM1-201ENST00000360718 TINF2Q9BSI4 451 aa14.45□□□□□ -0.1
SQSTM1-201ENST00000360718 VPS16Q9H269 839 aa14.45□□□□□ -0.1
SQSTM1-201ENST00000360718 ABHD10Q9NUJ1 306 aa14.45□□□□□ -0.1
SQSTM1-201ENST00000360718 GJD2Q9UKL4 321 aa14.45□□□□□ -0.1
SQSTM1-201ENST00000360718 IGSF9BQ9UPX0 1349 aa14.45□□□□□ -0.1
SQSTM1-201ENST00000360718 IGKV6D-21A0A0A0MT36 114 aa14.45□□□□□ -0.1
SQSTM1-201ENST00000360718 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.45□□□□□ -0.1
SQSTM1-201ENST00000360718 SEC31AO94979 1220 aaKnown RBP14.45□□□□□ -0.1
SQSTM1-201ENST00000360718 TUBBP07437 444 aa14.45□□□□□ -0.1
SQSTM1-201ENST00000360718 GUCY2CP25092 1073 aa14.45□□□□□ -0.1
SQSTM1-201ENST00000360718 ADCYAP1R1P41586 468 aa14.45□□□□□ -0.1
SQSTM1-201ENST00000360718 XKR9Q5GH70 373 aa14.45□□□□□ -0.1
SQSTM1-201ENST00000360718 NOC3LQ8WTT2 800 aaKnown RBP14.45□□□□□ -0.1
SQSTM1-201ENST00000360718 TSG101Q99816 390 aa14.45□□□□□ -0.1
SQSTM1-201ENST00000360718 PARVGQ9HBI0 331 aa14.45□□□□□ -0.1
SQSTM1-201ENST00000360718 VTA1Q9NP79 307 aa14.45□□□□□ -0.1
SQSTM1-201ENST00000360718 ADCY6O43306 1168 aa14.44□□□□□ -0.1
SQSTM1-201ENST00000360718 TBC1D8O95759 1140 aa14.44□□□□□ -0.1
SQSTM1-201ENST00000360718 CASP5P51878 434 aa14.44□□□□□ -0.1
SQSTM1-201ENST00000360718 MAPK7Q13164 816 aa14.44□□□□□ -0.1
SQSTM1-201ENST00000360718 TSR1Q2NL82 804 aaKnown RBP14.44□□□□□ -0.1
SQSTM1-201ENST00000360718 SFR1Q86XK3 245 aa14.44□□□□□ -0.1
SQSTM1-201ENST00000360718 DAW1Q8N136 415 aa14.44□□□□□ -0.1
SQSTM1-201ENST00000360718 MYCT1Q8N699 235 aa14.44□□□□□ -0.1
SQSTM1-201ENST00000360718 TIPINQ9BVW5 301 aa14.44□□□□□ -0.1
SQSTM1-201ENST00000360718 IRX2Q9BZI1 471 aaPredicted RBP14.44□□□□□ -0.1
SQSTM1-201ENST00000360718 ZNF302Q9NR11 478 aa14.44□□□□□ -0.1
SQSTM1-201ENST00000360718 ST7Q9NRC1 585 aa14.44□□□□□ -0.1
SQSTM1-201ENST00000360718 SEL1LQ9UBV2 794 aa14.44□□□□□ -0.1
SQSTM1-201ENST00000360718 MAFBQ9Y5Q3 323 aaPredicted RBP14.44□□□□□ -0.1
SQSTM1-201ENST00000360718 NOP56O00567 594 aaKnown RBP14.44□□□□□ -0.1
SQSTM1-201ENST00000360718 ERLIN1O75477 346 aa14.44□□□□□ -0.1
SQSTM1-201ENST00000360718 FGFR1OPO95684 399 aaKnown RBP14.44□□□□□ -0.1
SQSTM1-201ENST00000360718 PRKCEQ02156 737 aa14.44□□□□□ -0.1
SQSTM1-201ENST00000360718 GPS2Q13227 327 aa14.44□□□□□ -0.1
SQSTM1-201ENST00000360718 PRAMEF19Q5SWL8 479 aa14.44□□□□□ -0.1
SQSTM1-201ENST00000360718 FAM160B1Q5W0V3 765 aa14.44□□□□□ -0.1
SQSTM1-201ENST00000360718 DHX37Q8IY37 1157 aaKnown RBP14.44□□□□□ -0.1
SQSTM1-201ENST00000360718 CSGALNACT2Q8N6G5 542 aa14.44□□□□□ -0.1
SQSTM1-201ENST00000360718 HNRNPLLQ8WVV9 542 aaKnown RBP14.44□□□□□ -0.1
SQSTM1-201ENST00000360718 GPR20Q99678 358 aa14.44□□□□□ -0.1
SQSTM1-201ENST00000360718 NAPGQ99747 312 aaPredicted RBP14.44□□□□□ -0.1
SQSTM1-201ENST00000360718 UBXN6Q9BZV1 441 aa14.44□□□□□ -0.1
SQSTM1-201ENST00000360718 TAB2Q9NYJ8 693 aa14.44□□□□□ -0.1
SQSTM1-201ENST00000360718 MAGEC2Q9UBF1 373 aaPredicted RBP14.44□□□□□ -0.1
SQSTM1-201ENST00000360718 RBM47A0AV96 593 aaKnown RBP14.43□□□□□ -0.1
SQSTM1-201ENST00000360718 ALDH1A1P00352 501 aa14.43□□□□□ -0.1
SQSTM1-201ENST00000360718 HOXC6P09630 235 aa14.43□□□□□ -0.1
SQSTM1-201ENST00000360718 CYP2B6P20813 491 aa14.43□□□□□ -0.1
SQSTM1-201ENST00000360718 EEF1GP26641 437 aaKnown RBP14.43□□□□□ -0.1
SQSTM1-201ENST00000360718 CYP2C19P33261 490 aa14.43□□□□□ -0.1
SQSTM1-201ENST00000360718 KRT9P35527 623 aa14.43□□□□□ -0.1
SQSTM1-201ENST00000360718 TCF7P36402 384 aaPredicted RBP14.43□□□□□ -0.1
SQSTM1-201ENST00000360718 UBXN1Q04323 297 aa14.43□□□□□ -0.1
SQSTM1-201ENST00000360718 LRRC63Q05C16 580 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms