RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 ARHGAP29Q52LW3 1261 aa8.15□□□□□ -1.11
CLCN3-202ENST00000360642 GDF6Q6KF10 455 aaPredicted RBP8.15□□□□□ -1.11
CLCN3-202ENST00000360642 PRR5LQ6MZQ0 368 aa8.15□□□□□ -1.11
CLCN3-202ENST00000360642 CNGA4Q8IV77 575 aa8.15□□□□□ -1.11
CLCN3-202ENST00000360642 ADSSL1Q8N142 457 aa8.15□□□□□ -1.11
CLCN3-202ENST00000360642 CNBD1Q8NA66 436 aa8.15□□□□□ -1.11
CLCN3-202ENST00000360642 NELFBQ8WX92 580 aa8.15□□□□□ -1.11
CLCN3-202ENST00000360642 GPR101Q96P66 508 aaPredicted RBP8.15□□□□□ -1.11
CLCN3-202ENST00000360642 CARD6Q9BX69 1037 aa8.15□□□□□ -1.11
CLCN3-202ENST00000360642 ZNRF3Q9ULT6 936 aa8.15□□□□□ -1.11
CLCN3-202ENST00000360642 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.15□□□□□ -1.11
CLCN3-202ENST00000360642 ATXN7O15265 892 aaPredicted RBP8.14□□□□□ -1.11
CLCN3-202ENST00000360642 KLRC4O43908 158 aa8.14□□□□□ -1.11
CLCN3-202ENST00000360642 COBLO75128 1261 aa8.14□□□□□ -1.11
CLCN3-202ENST00000360642 BPNT1O95861 308 aa8.14□□□□□ -1.11
CLCN3-202ENST00000360642 SMARCA1P28370 1054 aa8.14□□□□□ -1.11
CLCN3-202ENST00000360642 COPB1P53618 953 aaKnown RBP8.14□□□□□ -1.11
CLCN3-202ENST00000360642 SPAG1Q07617 926 aa8.14□□□□□ -1.11
CLCN3-202ENST00000360642 INF2Q27J81 1249 aa8.14□□□□□ -1.11
CLCN3-202ENST00000360642 IRF2BP1Q8IU81 584 aa8.14□□□□□ -1.11
CLCN3-202ENST00000360642 MAPKAPK5Q8IW41 473 aa8.14□□□□□ -1.11
CLCN3-202ENST00000360642 SULF2Q8IWU5 870 aa8.14□□□□□ -1.11
CLCN3-202ENST00000360642 NEDD1Q8NHV4 660 aa8.14□□□□□ -1.11
CLCN3-202ENST00000360642 LRRC15Q8TF66 581 aa8.14□□□□□ -1.11
CLCN3-202ENST00000360642 PPP1R14AQ96A00 147 aa8.14□□□□□ -1.11
CLCN3-202ENST00000360642 DPH2Q9BQC3 489 aaPredicted RBP8.14□□□□□ -1.11
CLCN3-202ENST00000360642 ZNF287Q9HBT7 754 aa8.14□□□□□ -1.11
CLCN3-202ENST00000360642 TMEM39AQ9NV64 488 aa8.14□□□□□ -1.11
CLCN3-202ENST00000360642 GDAQ9Y2T3 454 aa8.14□□□□□ -1.11
CLCN3-202ENST00000360642 KLRF2D3W0D1 207 aa8.14□□□□□ -1.11
CLCN3-202ENST00000360642 H7C1D1 291 aa8.14□□□□□ -1.11
CLCN3-202ENST00000360642 RNF225M0QZC1 329 aaPredicted RBP8.14□□□□□ -1.11
CLCN3-202ENST00000360642 PDE2AO00408 941 aaPredicted RBP8.14□□□□□ -1.11
CLCN3-202ENST00000360642 BTDP43251 543 aa8.14□□□□□ -1.11
CLCN3-202ENST00000360642 RHBDL3P58872 404 aa8.14□□□□□ -1.11
CLCN3-202ENST00000360642 LHFPL2Q6ZUX7 228 aa8.14□□□□□ -1.11
CLCN3-202ENST00000360642 RSRC2Q7L4I2 434 aaKnown RBP8.14□□□□□ -1.11
CLCN3-202ENST00000360642 HEATR3Q7Z4Q2 680 aa8.14□□□□□ -1.11
CLCN3-202ENST00000360642 SAP30BPQ9UHR5 308 aaKnown RBP8.14□□□□□ -1.11
CLCN3-202ENST00000360642 PPM1HQ9ULR3 514 aa8.14□□□□□ -1.11
CLCN3-202ENST00000360642 STX8Q9UNK0 236 aa8.14□□□□□ -1.11
CLCN3-202ENST00000360642 FLT1P17948 1338 aa8.14□□□□□ -1.11
CLCN3-202ENST00000360642 LTBP3Q9NS15 1303 aa8.14□□□□□ -1.11
CLCN3-202ENST00000360642 PP2D1A8MPX8 630 aa8.14□□□□□ -1.11
CLCN3-202ENST00000360642 KCNJ18B7U540 433 aa8.14□□□□□ -1.11
CLCN3-202ENST00000360642 RHOBTB3O94955 611 aa8.14□□□□□ -1.11
CLCN3-202ENST00000360642 ZRANB2O95218 330 aaKnown RBP eCLIP8.14□□□□□ -1.111e-6■■■■■ 42
CLCN3-202ENST00000360642 ITPKAP23677 461 aa8.14□□□□□ -1.11
CLCN3-202ENST00000360642 CCT6AP40227 531 aaKnown RBP8.14□□□□□ -1.11
CLCN3-202ENST00000360642 KCNJ12Q14500 433 aa8.14□□□□□ -1.11
CLCN3-202ENST00000360642 POTEGQ6S5H5 508 aa8.14□□□□□ -1.11
CLCN3-202ENST00000360642 TRIM46Q7Z4K8 759 aa8.14□□□□□ -1.11
CLCN3-202ENST00000360642 KRT222Q8N1A0 295 aa8.14□□□□□ -1.11
CLCN3-202ENST00000360642 MNS1Q8NEH6 495 aa8.14□□□□□ -1.11
CLCN3-202ENST00000360642 TRPM4Q8TD43 1214 aa8.14□□□□□ -1.11
CLCN3-202ENST00000360642 ZMYM5Q9UJ78 669 aa8.14□□□□□ -1.11
CLCN3-202ENST00000360642 USP21Q9UK80 565 aa8.14□□□□□ -1.11
CLCN3-202ENST00000360642 ATP8A1Q9Y2Q0 1164 aa8.14□□□□□ -1.11
CLCN3-202ENST00000360642 FHOD1Q9Y613 1164 aa8.14□□□□□ -1.11
CLCN3-202ENST00000360642 SRCAPQ6ZRS2 3230 aa8.14□□□□□ -1.11
CLCN3-202ENST00000360642 GAKO14976 1311 aa8.13□□□□□ -1.11
CLCN3-202ENST00000360642 A0A0U1RQJ8 604 aa8.13□□□□□ -1.11
CLCN3-202ENST00000360642 A0A1W2PQH9 124 aa8.13□□□□□ -1.11
CLCN3-202ENST00000360642 UPK3BL1B0FP48 263 aa8.13□□□□□ -1.11
CLCN3-202ENST00000360642 UPK3BL2E5RIL1 263 aa8.13□□□□□ -1.11
CLCN3-202ENST00000360642 N4BP3O15049 544 aa8.13□□□□□ -1.11
CLCN3-202ENST00000360642 TPM1P09493 284 aa8.13□□□□□ -1.11
CLCN3-202ENST00000360642 GOLGA8HP0CJ92 632 aa8.13□□□□□ -1.11
CLCN3-202ENST00000360642 GIMAP8Q8ND71 665 aaPredicted RBP8.13□□□□□ -1.11
CLCN3-202ENST00000360642 ATRIPQ8WXE1 791 aa8.13□□□□□ -1.11
CLCN3-202ENST00000360642 AK8Q96MA6 479 aa8.13□□□□□ -1.11
CLCN3-202ENST00000360642 EYA3Q99504 573 aa8.13□□□□□ -1.11
CLCN3-202ENST00000360642 IRX2Q9BZI1 471 aaPredicted RBP8.13□□□□□ -1.11
CLCN3-202ENST00000360642 LRRC4BQ9NT99 713 aa8.13□□□□□ -1.11
CLCN3-202ENST00000360642 ABHD10Q9NUJ1 306 aa8.13□□□□□ -1.11
CLCN3-202ENST00000360642 GRIA2P42262 883 aa8.13□□□□□ -1.11
CLCN3-202ENST00000360642 PMS1P54277 932 aaKnown RBP8.13□□□□□ -1.11
CLCN3-202ENST00000360642 ERVK-24P63145 666 aa8.13□□□□□ -1.11
CLCN3-202ENST00000360642 GABPB1Q06547 395 aaPredicted RBP8.13□□□□□ -1.11
CLCN3-202ENST00000360642 TRIM14Q14142 442 aa8.13□□□□□ -1.11
CLCN3-202ENST00000360642 C2orf27AQ580R0 203 aa8.13□□□□□ -1.11
CLCN3-202ENST00000360642 SV2BQ7L1I2 683 aa8.13□□□□□ -1.11
CLCN3-202ENST00000360642 TMTC1Q8IUR5 882 aa8.13□□□□□ -1.11
CLCN3-202ENST00000360642 VPS16Q9H269 839 aa8.13□□□□□ -1.11
CLCN3-202ENST00000360642 CUEDC2Q9H467 287 aa8.13□□□□□ -1.11
CLCN3-202ENST00000360642 EFSO43281 561 aa8.12□□□□□ -1.11
CLCN3-202ENST00000360642 UFL1O94874 794 aa8.12□□□□□ -1.11
CLCN3-202ENST00000360642 F11P03951 625 aa8.12□□□□□ -1.11
CLCN3-202ENST00000360642 PARP1P09874 1014 aaKnown RBP8.12□□□□□ -1.11
CLCN3-202ENST00000360642 UBA7P41226 1012 aa8.12□□□□□ -1.11
CLCN3-202ENST00000360642 EFHC2Q5JST6 749 aa8.12□□□□□ -1.11
CLCN3-202ENST00000360642 DDX42Q86XP3 938 aaKnown RBP eCLIP8.12□□□□□ -1.11
CLCN3-202ENST00000360642 ZNF507Q8TCN5 953 aa8.12□□□□□ -1.11
CLCN3-202ENST00000360642 RPGRQ92834 1020 aaKnown RBP8.12□□□□□ -1.11
CLCN3-202ENST00000360642 THAP9Q9H5L6 903 aa8.12□□□□□ -1.11
CLCN3-202ENST00000360642 MAGEF1Q9HAY2 307 aa8.12□□□□□ -1.11
CLCN3-202ENST00000360642 TAB2Q9NYJ8 693 aa8.12□□□□□ -1.11
CLCN3-202ENST00000360642 TRIM49BA6NDI0 452 aa8.12□□□□□ -1.11
CLCN3-202ENST00000360642 CILPO75339 1184 aa8.12□□□□□ -1.11
CLCN3-202ENST00000360642 GYS1P13807 737 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms