RNA–Protein interactions for RNA: ENST00000359541.6

GTF3C2-202, Transcript of general transcription factor IIIC subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C2, Length 3,992 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-202ENST00000359541 CASP4P49662 377 aa10.13□□□□□ -0.79
GTF3C2-202ENST00000359541 SMTNP53814 917 aa10.13□□□□□ -0.79
GTF3C2-202ENST00000359541 PPP2R5EQ16537 467 aa10.13□□□□□ -0.79
GTF3C2-202ENST00000359541 CFAP58Q5T655 872 aa10.13□□□□□ -0.79
GTF3C2-202ENST00000359541 CPXCR1Q8N123 301 aa10.13□□□□□ -0.79
GTF3C2-202ENST00000359541 MTMR14Q8NCE2 650 aa10.13□□□□□ -0.79
GTF3C2-202ENST00000359541 GDAP1L1Q96MZ0 367 aa10.13□□□□□ -0.79
GTF3C2-202ENST00000359541 AGPAT3Q9NRZ7 376 aa10.13□□□□□ -0.79
GTF3C2-202ENST00000359541 PKD2L1Q9P0L9 805 aa10.13□□□□□ -0.79
GTF3C2-202ENST00000359541 AMFRQ9UKV5 643 aa10.13□□□□□ -0.79
GTF3C2-202ENST00000359541 GOLGA6L10A0A0M3HER8 536 aa10.13□□□□□ -0.79
GTF3C2-202ENST00000359541 CCDC188H7C350 402 aa10.13□□□□□ -0.79
GTF3C2-202ENST00000359541 PGRMC1O00264 195 aaKnown RBP10.13□□□□□ -0.79
GTF3C2-202ENST00000359541 TAL1P17542 331 aaPredicted RBP10.13□□□□□ -0.79
GTF3C2-202ENST00000359541 ZNF131P52739 623 aa10.13□□□□□ -0.79
GTF3C2-202ENST00000359541 SNRPFP62306 86 aaKnown RBP10.13□□□□□ -0.79
GTF3C2-202ENST00000359541 JAG1P78504 1218 aa10.13□□□□□ -0.79
GTF3C2-202ENST00000359541 HLTFQ14527 1009 aaKnown RBP eCLIP10.13□□□□□ -0.794e-7■□□□□ 11
GTF3C2-202ENST00000359541 ZNF571Q7Z3V5 609 aaPredicted RBP10.13□□□□□ -0.79
GTF3C2-202ENST00000359541 CCDC26Q8TAB7 109 aa10.13□□□□□ -0.79
GTF3C2-202ENST00000359541 TMEM39BQ9GZU3 492 aa10.13□□□□□ -0.79
GTF3C2-202ENST00000359541 DNAJC12Q9UKB3 198 aa10.13□□□□□ -0.79
GTF3C2-202ENST00000359541 HIP1RO75146 1068 aa10.12□□□□□ -0.79
GTF3C2-202ENST00000359541 ERLIN2O94905 339 aa10.12□□□□□ -0.79
GTF3C2-202ENST00000359541 KIF4AO95239 1232 aa10.12□□□□□ -0.79
GTF3C2-202ENST00000359541 QARSP47897 775 aaKnown RBP10.12□□□□□ -0.79
GTF3C2-202ENST00000359541 JAK3P52333 1124 aa10.12□□□□□ -0.79
GTF3C2-202ENST00000359541 RRP1BQ14684 758 aaKnown RBP10.12□□□□□ -0.79
GTF3C2-202ENST00000359541 CIAPIN1Q6FI81 312 aa10.12□□□□□ -0.79
GTF3C2-202ENST00000359541 IRF2BP2Q7Z5L9 587 aa10.12□□□□□ -0.79
GTF3C2-202ENST00000359541 DAAM2Q86T65 1068 aa10.12□□□□□ -0.79
GTF3C2-202ENST00000359541 BANK1Q8NDB2 785 aa10.12□□□□□ -0.79
GTF3C2-202ENST00000359541 WHAMMQ8TF30 809 aa10.12□□□□□ -0.79
GTF3C2-202ENST00000359541 AENQ8WTP8 325 aaKnown RBP10.12□□□□□ -0.79
GTF3C2-202ENST00000359541 IFT81Q8WYA0 676 aa10.12□□□□□ -0.79
GTF3C2-202ENST00000359541 KRT12Q99456 494 aa10.12□□□□□ -0.79
GTF3C2-202ENST00000359541 RBM12Q9NTZ6 932 aaKnown RBP10.12□□□□□ -0.79
GTF3C2-202ENST00000359541 ARP10275 920 aa10.12□□□□□ -0.79
GTF3C2-202ENST00000359541 NPEPPSP55786 919 aa10.12□□□□□ -0.79
GTF3C2-202ENST00000359541 BFSP1Q12934 665 aa10.12□□□□□ -0.79
GTF3C2-202ENST00000359541 MTMR1Q13613 665 aa10.12□□□□□ -0.79
GTF3C2-202ENST00000359541 PLS1Q14651 629 aa10.12□□□□□ -0.79
GTF3C2-202ENST00000359541 ZC2HC1CQ53FD0 456 aaPredicted RBP10.12□□□□□ -0.79
GTF3C2-202ENST00000359541 INTS2Q9H0H0 1204 aaKnown RBP10.12□□□□□ -0.79
GTF3C2-202ENST00000359541 APEX2Q9UBZ4 518 aa10.12□□□□□ -0.79
GTF3C2-202ENST00000359541 DIS3Q9Y2L1 958 aaKnown RBP10.12□□□□□ -0.79
GTF3C2-202ENST00000359541 ZBTB12Q9Y330 459 aaPredicted RBP10.12□□□□□ -0.79
GTF3C2-202ENST00000359541 P4HA2O15460 535 aa10.12□□□□□ -0.79
GTF3C2-202ENST00000359541 TGFB1I1O43294 461 aa10.12□□□□□ -0.79
GTF3C2-202ENST00000359541 GYS2P54840 703 aa10.12□□□□□ -0.79
GTF3C2-202ENST00000359541 SLC7A5Q01650 507 aa10.12□□□□□ -0.79
GTF3C2-202ENST00000359541 GUCY2DQ02846 1103 aa10.12□□□□□ -0.79
GTF3C2-202ENST00000359541 MAATS1Q7Z4T9 603 aa10.12□□□□□ -0.79
GTF3C2-202ENST00000359541 SLC9A9Q8IVB4 645 aa10.12□□□□□ -0.79
GTF3C2-202ENST00000359541 GSPT2Q8IYD1 628 aaKnown RBP10.12□□□□□ -0.79
GTF3C2-202ENST00000359541 DBR1Q9UK59 544 aaKnown RBP10.12□□□□□ -0.79
GTF3C2-202ENST00000359541 EVI5O60447 810 aa10.11□□□□□ -0.79
GTF3C2-202ENST00000359541 SFNP31947 248 aa10.11□□□□□ -0.79
GTF3C2-202ENST00000359541 GGCXP38435 758 aa10.11□□□□□ -0.79
GTF3C2-202ENST00000359541 DRAP1Q14919 205 aaPredicted RBP10.11□□□□□ -0.79
GTF3C2-202ENST00000359541 MUM1L1Q5H9M0 696 aa10.11□□□□□ -0.79
GTF3C2-202ENST00000359541 CAVIN3Q969G5 261 aa10.11□□□□□ -0.79
GTF3C2-202ENST00000359541 LRRC45Q96CN5 670 aa10.11□□□□□ -0.79
GTF3C2-202ENST00000359541 EPB41L5Q9HCM4 733 aa10.11□□□□□ -0.79
GTF3C2-202ENST00000359541 KCNH7Q9NS40 1196 aa10.11□□□□□ -0.79
GTF3C2-202ENST00000359541 SALL4Q9UJQ4 1053 aa10.11□□□□□ -0.79
GTF3C2-202ENST00000359541 SLX4Q8IY92 1834 aa10.11□□□□□ -0.79
GTF3C2-202ENST00000359541 HSD17B4P51659 736 aa10.11□□□□□ -0.79
GTF3C2-202ENST00000359541 USP38Q8NB14 1042 aa10.11□□□□□ -0.79
GTF3C2-202ENST00000359541 RFFLQ8WZ73 363 aa10.11□□□□□ -0.79
GTF3C2-202ENST00000359541 PACSIN1Q9BY11 444 aa10.11□□□□□ -0.79
GTF3C2-202ENST00000359541 DEFB129Q9H1M3 183 aa10.11□□□□□ -0.79
GTF3C2-202ENST00000359541 POLD4Q9HCU8 107 aa10.11□□□□□ -0.79
GTF3C2-202ENST00000359541 FBXO28Q9NVF7 368 aa10.11□□□□□ -0.79
GTF3C2-202ENST00000359541 DMGDHQ9UI17 866 aaKnown RBP10.11□□□□□ -0.79
GTF3C2-202ENST00000359541 HOXD13P35453 343 aa10.11□□□□□ -0.79
GTF3C2-202ENST00000359541 KRT76Q01546 638 aa10.11□□□□□ -0.79
GTF3C2-202ENST00000359541 CUL1Q13616 776 aa10.11□□□□□ -0.79
GTF3C2-202ENST00000359541 PCNX4Q63HM2 1172 aa10.11□□□□□ -0.79
GTF3C2-202ENST00000359541 DCAF15Q66K64 600 aa10.11□□□□□ -0.79
GTF3C2-202ENST00000359541 MAEAQ7L5Y9 396 aa10.11□□□□□ -0.79
GTF3C2-202ENST00000359541 NLRX1Q86UT6 975 aa10.11□□□□□ -0.79
GTF3C2-202ENST00000359541 KLHL7Q8IXQ5 586 aa10.11□□□□□ -0.79
GTF3C2-202ENST00000359541 MS4A14Q96JA4 679 aa10.11□□□□□ -0.79
GTF3C2-202ENST00000359541 GMLQ99445 158 aa10.11□□□□□ -0.79
GTF3C2-202ENST00000359541 AS3MTQ9HBK9 375 aa10.11□□□□□ -0.79
GTF3C2-202ENST00000359541 ARFGEF1Q9Y6D6 1849 aa10.11□□□□□ -0.79
GTF3C2-202ENST00000359541 WDR64B1ANS9 1081 aa10.1□□□□□ -0.79
GTF3C2-202ENST00000359541 F8VZ95 297 aa10.1□□□□□ -0.79
GTF3C2-202ENST00000359541 MYCLP12524 364 aaPredicted RBP10.1□□□□□ -0.79
GTF3C2-202ENST00000359541 PLS3P13797 630 aa10.1□□□□□ -0.79
GTF3C2-202ENST00000359541 ARHGAP44Q17R89 818 aa10.1□□□□□ -0.79
GTF3C2-202ENST00000359541 OTUD6AQ7L8S5 288 aa10.1□□□□□ -0.79
GTF3C2-202ENST00000359541 RHOT2Q8IXI1 618 aa10.1□□□□□ -0.79
GTF3C2-202ENST00000359541 XXYLT1Q8NBI6 393 aa10.1□□□□□ -0.79
GTF3C2-202ENST00000359541 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.1□□□□□ -0.798e-8■■■□□ 15.4
GTF3C2-202ENST00000359541 HOMER2Q9NSB8 354 aa10.1□□□□□ -0.79
GTF3C2-202ENST00000359541 BCCIPQ9P287 314 aaKnown RBP eCLIP10.1□□□□□ -0.79
GTF3C2-202ENST00000359541 SUCLA2Q9P2R7 463 aaPredicted RBP10.1□□□□□ -0.79
GTF3C2-202ENST00000359541 SIPA1L1O43166 1804 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms