RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 GGA3Q9NZ52 723 aa16.3■□□□□ 0.2
GABPB1-202ENST00000359031 JRKLQ9Y4A0 524 aa16.3■□□□□ 0.2
GABPB1-202ENST00000359031 DAAM1Q9Y4D1 1078 aa16.3■□□□□ 0.2
GABPB1-202ENST00000359031 BZW2Q9Y6E2 419 aaKnown RBP16.3■□□□□ 0.2
GABPB1-202ENST00000359031 A0A0G2JMZ2 1700 aa16.3■□□□□ 0.2
GABPB1-202ENST00000359031 ATP8B3O60423 1300 aa16.3■□□□□ 0.2
GABPB1-202ENST00000359031 K7ENM7 598 aa16.3■□□□□ 0.2
GABPB1-202ENST00000359031 TUBBP07437 444 aa16.3■□□□□ 0.2
GABPB1-202ENST00000359031 UCHL3P15374 230 aa16.3■□□□□ 0.2
GABPB1-202ENST00000359031 HMGCS2P54868 508 aa16.3■□□□□ 0.2
GABPB1-202ENST00000359031 PSMC5P62195 406 aa16.3■□□□□ 0.2
GABPB1-202ENST00000359031 GFPT1Q06210 699 aaPredicted RBP16.3■□□□□ 0.2
GABPB1-202ENST00000359031 KLHL30Q0D2K2 578 aa16.3■□□□□ 0.2
GABPB1-202ENST00000359031 SLC18A3Q16572 532 aa16.3■□□□□ 0.2
GABPB1-202ENST00000359031 SNRNP48Q6IEG0 339 aaKnown RBP16.3■□□□□ 0.2
GABPB1-202ENST00000359031 NLRX1Q86UT6 975 aa16.3■□□□□ 0.2
GABPB1-202ENST00000359031 RNF10Q8N5U6 811 aaKnown RBP16.3■□□□□ 0.2
GABPB1-202ENST00000359031 SLC17A8Q8NDX2 589 aa16.3■□□□□ 0.2
GABPB1-202ENST00000359031 TMEM174Q8WUU8 243 aa16.3■□□□□ 0.2
GABPB1-202ENST00000359031 WNK4Q96J92 1243 aa16.3■□□□□ 0.2
GABPB1-202ENST00000359031 DRC1Q96MC2 740 aa16.3■□□□□ 0.2
GABPB1-202ENST00000359031 SPAG5Q96R06 1193 aa16.3■□□□□ 0.2
GABPB1-202ENST00000359031 SENP7Q9BQF6 1050 aa16.3■□□□□ 0.2
GABPB1-202ENST00000359031 PARD6BQ9BYG5 372 aa16.3■□□□□ 0.2
GABPB1-202ENST00000359031 TMEM206Q9H813 350 aa16.3■□□□□ 0.2
GABPB1-202ENST00000359031 TMOD4Q9NZQ9 345 aa16.3■□□□□ 0.2
GABPB1-202ENST00000359031 GCNT4Q9P109 453 aa16.3■□□□□ 0.2
GABPB1-202ENST00000359031 ZNF214Q9UL59 606 aaPredicted RBP16.3■□□□□ 0.2
GABPB1-202ENST00000359031 FRMD4BQ9Y2L6 1034 aa16.3■□□□□ 0.2
GABPB1-202ENST00000359031 KIAA1217Q5T5P2 1943 aa16.29■□□□□ 0.2
GABPB1-202ENST00000359031 CCDC151A5D8V7 595 aa16.29■□□□□ 0.2
GABPB1-202ENST00000359031 SPDYE4A6NLX3 237 aa16.29■□□□□ 0.2
GABPB1-202ENST00000359031 ENC1O14682 589 aa16.29■□□□□ 0.2
GABPB1-202ENST00000359031 MAFGO15525 162 aa16.29■□□□□ 0.2
GABPB1-202ENST00000359031 PLS3P13797 630 aa16.29■□□□□ 0.2
GABPB1-202ENST00000359031 SLC9A1P19634 815 aa16.29■□□□□ 0.2
GABPB1-202ENST00000359031 YWHABP31946 246 aaKnown RBP16.29■□□□□ 0.2
GABPB1-202ENST00000359031 BAATQ14032 418 aaPredicted RBP16.29■□□□□ 0.2
GABPB1-202ENST00000359031 COG2Q14746 738 aa16.29■□□□□ 0.2
GABPB1-202ENST00000359031 SUPT20HL1Q3ZLR7 823 aa16.29■□□□□ 0.2
GABPB1-202ENST00000359031 ZNF746Q6NUN9 644 aaPredicted RBP16.29■□□□□ 0.2
GABPB1-202ENST00000359031 C12orf56Q8IXR9 622 aa16.29■□□□□ 0.2
GABPB1-202ENST00000359031 KRT222Q8N1A0 295 aa16.29■□□□□ 0.2
GABPB1-202ENST00000359031 FAM133AQ8N9E0 248 aa16.29■□□□□ 0.2
GABPB1-202ENST00000359031 ST6GALNAC4Q9H4F1 302 aa16.29■□□□□ 0.2
GABPB1-202ENST00000359031 ANKEF1Q9NU02 776 aa16.29■□□□□ 0.2
GABPB1-202ENST00000359031 RAB21Q9UL25 225 aa16.29■□□□□ 0.2
GABPB1-202ENST00000359031 CAPN6Q9Y6Q1 641 aa16.29■□□□□ 0.2
GABPB1-202ENST00000359031 DUSP10Q9Y6W6 482 aa16.29■□□□□ 0.2
GABPB1-202ENST00000359031 LCTP09848 1927 aa16.29■□□□□ 0.2
GABPB1-202ENST00000359031 PTPRFP10586 1907 aa16.29■□□□□ 0.2
GABPB1-202ENST00000359031 TESPA1A2RU30 521 aaPredicted RBP16.28■□□□□ 0.2
GABPB1-202ENST00000359031 ACTN1P12814 892 aa16.28■□□□□ 0.2
GABPB1-202ENST00000359031 PRKCIP41743 596 aa16.28■□□□□ 0.2
GABPB1-202ENST00000359031 SNRPFP62306 86 aaKnown RBP16.28■□□□□ 0.2
GABPB1-202ENST00000359031 CBX1P83916 185 aa16.28■□□□□ 0.2
GABPB1-202ENST00000359031 APBA1Q02410 837 aa16.28■□□□□ 0.2
GABPB1-202ENST00000359031 C10orf76Q5T2E6 689 aa16.28■□□□□ 0.2
GABPB1-202ENST00000359031 CC2D1AQ6P1N0 951 aaPredicted RBP16.28■□□□□ 0.2
GABPB1-202ENST00000359031 CATSPERGQ6ZRH7 1159 aa16.28■□□□□ 0.2
GABPB1-202ENST00000359031 VSIG10LQ86VR7 867 aa16.28■□□□□ 0.2
GABPB1-202ENST00000359031 SYCP3Q8IZU3 236 aa16.28■□□□□ 0.2
GABPB1-202ENST00000359031 CAPNS2Q96L46 248 aa16.28■□□□□ 0.2
GABPB1-202ENST00000359031 TEX13BQ9BXU2 312 aa16.28■□□□□ 0.2
GABPB1-202ENST00000359031 EPC1Q9H2F5 836 aa16.28■□□□□ 0.2
GABPB1-202ENST00000359031 ANKZF1Q9H8Y5 726 aa16.28■□□□□ 0.2
GABPB1-202ENST00000359031 MLXIPQ9HAP2 919 aa16.28■□□□□ 0.2
GABPB1-202ENST00000359031 SIX2Q9NPC8 291 aa16.28■□□□□ 0.2
GABPB1-202ENST00000359031 HDAC6Q9UBN7 1215 aa16.28■□□□□ 0.2
GABPB1-202ENST00000359031 RIPK3Q9Y572 518 aa16.28■□□□□ 0.2
GABPB1-202ENST00000359031 FHOD1Q9Y613 1164 aa16.28■□□□□ 0.2
GABPB1-202ENST00000359031 OTOFQ9HC10 1997 aa16.28■□□□□ 0.2
GABPB1-202ENST00000359031 STAM2O75886 525 aa16.27■□□□□ 0.2
GABPB1-202ENST00000359031 MOCS3O95396 460 aa16.27■□□□□ 0.2
GABPB1-202ENST00000359031 PRLRP16471 622 aa16.27■□□□□ 0.2
GABPB1-202ENST00000359031 JAM2P57087 298 aa16.27■□□□□ 0.2
GABPB1-202ENST00000359031 MLLT1Q03111 559 aaPredicted RBP16.27■□□□□ 0.2
GABPB1-202ENST00000359031 IQCEQ6IPM2 695 aa16.27■□□□□ 0.2
GABPB1-202ENST00000359031 CYP4F22Q6NT55 531 aa16.27■□□□□ 0.2
GABPB1-202ENST00000359031 NSUN6Q8TEA1 469 aaKnown RBP16.27■□□□□ 0.2
GABPB1-202ENST00000359031 CDHR1Q96JP9 859 aa16.27■□□□□ 0.2
GABPB1-202ENST00000359031 INPP4AQ96PE3 977 aaPredicted RBP16.27■□□□□ 0.2
GABPB1-202ENST00000359031 NOX5Q96PH1 765 aa16.27■□□□□ 0.2
GABPB1-202ENST00000359031 ACCSQ96QU6 501 aa16.27■□□□□ 0.2
GABPB1-202ENST00000359031 IWS1Q96ST2 819 aa16.27■□□□□ 0.2
GABPB1-202ENST00000359031 ACAD9Q9H845 621 aa16.27■□□□□ 0.2
GABPB1-202ENST00000359031 ARFGAP3Q9NP61 516 aa16.27■□□□□ 0.2
GABPB1-202ENST00000359031 SNX12Q9UMY4 172 aa16.27■□□□□ 0.2
GABPB1-202ENST00000359031 DKC1O60832 514 aaKnown RBP eCLIP16.27■□□□□ 0.19
GABPB1-202ENST00000359031 CCNE2O96020 404 aa16.27■□□□□ 0.19
GABPB1-202ENST00000359031 NR3C2P08235 984 aa16.27■□□□□ 0.19
GABPB1-202ENST00000359031 PNMA6AP0CW24 399 aaPredicted RBP16.27■□□□□ 0.19
GABPB1-202ENST00000359031 FMO5P49326 533 aa16.27■□□□□ 0.19
GABPB1-202ENST00000359031 CYP2J2P51589 502 aa16.27■□□□□ 0.19
GABPB1-202ENST00000359031 TMEM132BQ14DG7 1078 aa16.27■□□□□ 0.19
GABPB1-202ENST00000359031 UGCGQ16739 394 aa16.27■□□□□ 0.19
GABPB1-202ENST00000359031 SH3D19Q5HYK7 790 aa16.27■□□□□ 0.19
GABPB1-202ENST00000359031 PRAMEF18Q5VWM3 479 aa16.27■□□□□ 0.19
GABPB1-202ENST00000359031 GPIHBP1Q8IV16 184 aa16.27■□□□□ 0.19
GABPB1-202ENST00000359031 FMNL3Q8IVF7 1028 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms