RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 TIMM10P62072 90 aa6.48□□□□□ -1.37
VPS13B-203ENST00000358544 KDSRQ06136 332 aa6.48□□□□□ -1.37
VPS13B-203ENST00000358544 POTEAQ6S8J7 498 aa6.48□□□□□ -1.37
VPS13B-203ENST00000358544 ACAD11Q709F0 780 aa6.48□□□□□ -1.37
VPS13B-203ENST00000358544 VTI1AQ96AJ9 217 aa6.48□□□□□ -1.37
VPS13B-203ENST00000358544 EDC4Q6P2E9 1401 aaKnown RBP6.48□□□□□ -1.37
VPS13B-203ENST00000358544 H7C0C1 242 aa6.48□□□□□ -1.37
VPS13B-203ENST00000358544 KRT38O76015 456 aa6.48□□□□□ -1.37
VPS13B-203ENST00000358544 ATP5OP48047 213 aa6.48□□□□□ -1.37
VPS13B-203ENST00000358544 PIGOQ8TEQ8 1089 aa6.48□□□□□ -1.37
VPS13B-203ENST00000358544 C21orf2O43822 256 aa6.48□□□□□ -1.37
VPS13B-203ENST00000358544 E2F6O75461 281 aa6.48□□□□□ -1.37
VPS13B-203ENST00000358544 MTTPP55157 894 aa6.48□□□□□ -1.37
VPS13B-203ENST00000358544 STK32AQ8WU08 396 aa6.48□□□□□ -1.37
VPS13B-203ENST00000358544 RPS6KC1Q96S38 1066 aa6.48□□□□□ -1.37
VPS13B-203ENST00000358544 PPCSQ9HAB8 311 aa6.48□□□□□ -1.37
VPS13B-203ENST00000358544 UBN1Q9NPG3 1134 aa6.48□□□□□ -1.37
VPS13B-203ENST00000358544 PCDHA4Q9UN74 947 aa6.48□□□□□ -1.37
VPS13B-203ENST00000358544 MAST3O60307 1309 aa6.48□□□□□ -1.37
VPS13B-203ENST00000358544 ACEP12821 1306 aa6.48□□□□□ -1.37
VPS13B-203ENST00000358544 MAP3K19Q56UN5 1328 aa6.48□□□□□ -1.37
VPS13B-203ENST00000358544 RNF103-CHMP3A0A140T963 221 aa6.48□□□□□ -1.37
VPS13B-203ENST00000358544 AP5Z1O43299 807 aa6.48□□□□□ -1.37
VPS13B-203ENST00000358544 ZAP70P43403 619 aa6.48□□□□□ -1.37
VPS13B-203ENST00000358544 SERPINB8P50452 374 aa6.48□□□□□ -1.37
VPS13B-203ENST00000358544 PMS1P54277 932 aaKnown RBP6.48□□□□□ -1.37
VPS13B-203ENST00000358544 PPM1KQ8N3J5 372 aa6.48□□□□□ -1.37
VPS13B-203ENST00000358544 PRCPP42785 496 aa6.48□□□□□ -1.37
VPS13B-203ENST00000358544 ALDH5A1P51649 535 aaPredicted RBP6.48□□□□□ -1.37
VPS13B-203ENST00000358544 FKBP3Q00688 224 aaKnown RBP6.48□□□□□ -1.37
VPS13B-203ENST00000358544 STAT4Q14765 748 aa6.48□□□□□ -1.37
VPS13B-203ENST00000358544 ROPN1BQ9BZX4 212 aaPredicted RBP6.48□□□□□ -1.37
VPS13B-203ENST00000358544 NDEL1Q9GZM8 345 aa6.48□□□□□ -1.37
VPS13B-203ENST00000358544 ROPN1Q9HAT0 212 aaPredicted RBP6.48□□□□□ -1.37
VPS13B-203ENST00000358544 ARHGEF17Q96PE2 2063 aaPredicted RBP6.48□□□□□ -1.37
VPS13B-203ENST00000358544 ATP6V1G1O75348 118 aa6.48□□□□□ -1.37
VPS13B-203ENST00000358544 DMPKQ09013 629 aa6.48□□□□□ -1.37
VPS13B-203ENST00000358544 ZCWPW2Q504Y3 356 aa6.48□□□□□ -1.37
VPS13B-203ENST00000358544 FAM83BQ5T0W9 1011 aa6.48□□□□□ -1.37
VPS13B-203ENST00000358544 GPR141Q7Z602 305 aa6.48□□□□□ -1.37
VPS13B-203ENST00000358544 POMGNT1Q8WZA1 660 aa6.48□□□□□ -1.37
VPS13B-203ENST00000358544 TTC17Q96AE7 1141 aa6.48□□□□□ -1.37
VPS13B-203ENST00000358544 FUCA2Q9BTY2 467 aa6.48□□□□□ -1.37
VPS13B-203ENST00000358544 ADD3Q9UEY8 706 aaKnown RBP6.48□□□□□ -1.37
VPS13B-203ENST00000358544 PLB1Q6P1J6 1458 aa6.48□□□□□ -1.37
VPS13B-203ENST00000358544 FGAP02671 866 aa6.48□□□□□ -1.37
VPS13B-203ENST00000358544 DHX34Q14147 1143 aaKnown RBP6.48□□□□□ -1.37
VPS13B-203ENST00000358544 SHC4Q6S5L8 630 aa6.48□□□□□ -1.37
VPS13B-203ENST00000358544 IZUMO2Q6UXV1 221 aa6.48□□□□□ -1.37
VPS13B-203ENST00000358544 CASP2P42575 452 aa6.48□□□□□ -1.37
VPS13B-203ENST00000358544 NR1I3Q14994 352 aa6.48□□□□□ -1.37
VPS13B-203ENST00000358544 ZNF280CQ8ND82 737 aa6.48□□□□□ -1.37
VPS13B-203ENST00000358544 FLCNQ8NFG4 579 aa6.48□□□□□ -1.37
VPS13B-203ENST00000358544 PLCH2O75038 1416 aa6.48□□□□□ -1.37
VPS13B-203ENST00000358544 WDR19Q8NEZ3 1342 aa6.48□□□□□ -1.37
VPS13B-203ENST00000358544 SGK1O00141 431 aa6.48□□□□□ -1.37
VPS13B-203ENST00000358544 HMGB3O15347 200 aaKnown RBP6.48□□□□□ -1.37
VPS13B-203ENST00000358544 ASAP2O43150 1006 aa6.48□□□□□ -1.37
VPS13B-203ENST00000358544 MS4A14Q96JA4 679 aa6.48□□□□□ -1.37
VPS13B-203ENST00000358544 RNF26Q9BY78 433 aaPredicted RBP6.48□□□□□ -1.37
VPS13B-203ENST00000358544 ISCUQ9H1K1 167 aa6.48□□□□□ -1.37
VPS13B-203ENST00000358544 GPCPD1Q9NPB8 672 aa6.48□□□□□ -1.37
VPS13B-203ENST00000358544 TEKT2Q9UIF3 430 aa6.48□□□□□ -1.37
VPS13B-203ENST00000358544 SMG5Q9UPR3 1016 aaKnown RBP6.48□□□□□ -1.37
VPS13B-203ENST00000358544 GCC2Q8IWJ2 1684 aa6.48□□□□□ -1.37
VPS13B-203ENST00000358544 PODXLO00592 558 aa6.48□□□□□ -1.37
VPS13B-203ENST00000358544 CD19P15391 556 aa6.48□□□□□ -1.37
VPS13B-203ENST00000358544 GAP43P17677 238 aa6.48□□□□□ -1.37
VPS13B-203ENST00000358544 PLCG1P19174 1290 aa6.48□□□□□ -1.37
VPS13B-203ENST00000358544 RFC5P40937 340 aa6.48□□□□□ -1.37
VPS13B-203ENST00000358544 IDI1Q13907 227 aa6.48□□□□□ -1.37
VPS13B-203ENST00000358544 CYGBQ8WWM9 190 aa6.48□□□□□ -1.37
VPS13B-203ENST00000358544 TMA7Q9Y2S6 64 aaKnown RBP6.48□□□□□ -1.37
VPS13B-203ENST00000358544 RIF1Q5UIP0 2472 aaKnown RBP6.48□□□□□ -1.37
VPS13B-203ENST00000358544 NUP153P49790 1475 aaKnown RBP6.48□□□□□ -1.37
VPS13B-203ENST00000358544 DUOX2Q9NRD8 1548 aa6.48□□□□□ -1.37
VPS13B-203ENST00000358544 SRRM3A6NNA2 597 aaPredicted RBP6.48□□□□□ -1.37
VPS13B-203ENST00000358544 CAPN9O14815 690 aa6.48□□□□□ -1.37
VPS13B-203ENST00000358544 BRAFP15056 766 aa6.48□□□□□ -1.37
VPS13B-203ENST00000358544 CARSP49589 748 aaKnown RBP6.48□□□□□ -1.37
VPS13B-203ENST00000358544 ACCSLQ4AC99 568 aa6.48□□□□□ -1.37
VPS13B-203ENST00000358544 TTBK2Q6IQ55 1244 aa6.48□□□□□ -1.37
VPS13B-203ENST00000358544 ZCRB1Q8TBF4 217 aaKnown RBP6.48□□□□□ -1.37
VPS13B-203ENST00000358544 CNGB3Q9NQW8 809 aa6.48□□□□□ -1.37
VPS13B-203ENST00000358544 MTO1Q9Y2Z2 717 aaKnown RBP6.48□□□□□ -1.37
VPS13B-203ENST00000358544 MBD5Q9P267 1494 aa6.47□□□□□ -1.37
VPS13B-203ENST00000358544 SYNMO15061 1565 aa6.47□□□□□ -1.37
VPS13B-203ENST00000358544 CALB2P22676 271 aa6.47□□□□□ -1.37
VPS13B-203ENST00000358544 LRRC36Q1X8D7 754 aa6.47□□□□□ -1.37
VPS13B-203ENST00000358544 NSMFQ6X4W1 530 aa6.47□□□□□ -1.37
VPS13B-203ENST00000358544 ADCK1Q86TW2 530 aa6.47□□□□□ -1.37
VPS13B-203ENST00000358544 ZNF354CQ86Y25 554 aa6.47□□□□□ -1.37
VPS13B-203ENST00000358544 LARP4BQ92615 738 aaKnown RBP6.47□□□□□ -1.37
VPS13B-203ENST00000358544 SH3GL1Q99961 368 aa6.47□□□□□ -1.37
VPS13B-203ENST00000358544 TSSK1BQ9BXA7 367 aa6.47□□□□□ -1.37
VPS13B-203ENST00000358544 WDR7Q9Y4E6 1490 aa6.47□□□□□ -1.37
VPS13B-203ENST00000358544 KRT39Q6A163 491 aa6.47□□□□□ -1.37
VPS13B-203ENST00000358544 ZNF594Q96JF6 807 aaPredicted RBP6.47□□□□□ -1.37
VPS13B-203ENST00000358544 DACH2Q96NX9 599 aa6.47□□□□□ -1.37
VPS13B-203ENST00000358544 GPHNQ9NQX3 736 aaPredicted RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms