RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 RFC5P40937 340 aa18.8■□□□□ 0.6
TPM1-205ENST00000357980 COPB1P53618 953 aaKnown RBP18.8■□□□□ 0.6
TPM1-205ENST00000357980 PEX3P56589 373 aa18.8■□□□□ 0.6
TPM1-205ENST00000357980 CAP1Q01518 475 aa18.8■□□□□ 0.6
TPM1-205ENST00000357980 TNFAIP2Q03169 654 aa18.8■□□□□ 0.6
TPM1-205ENST00000357980 VSTM4Q8IW00 320 aa18.8■□□□□ 0.6
TPM1-205ENST00000357980 BSNDQ8WZ55 320 aa18.8■□□□□ 0.6
TPM1-205ENST00000357980 CEP63Q96MT8 703 aa18.8■□□□□ 0.6
TPM1-205ENST00000357980 NTPCRQ9BSD7 190 aaKnown RBP18.8■□□□□ 0.6
TPM1-205ENST00000357980 RTN4Q9NQC3 1192 aaKnown RBP18.8■□□□□ 0.6
TPM1-205ENST00000357980 TAB2Q9NYJ8 693 aa18.8■□□□□ 0.6
TPM1-205ENST00000357980 MAGEC2Q9UBF1 373 aaPredicted RBP18.8■□□□□ 0.6
TPM1-205ENST00000357980 GNEQ9Y223 722 aaKnown RBP18.8■□□□□ 0.6
TPM1-205ENST00000357980 GOLGA6L6A8MZA4 724 aa18.79■□□□□ 0.6
TPM1-205ENST00000357980 NPTX2P47972 431 aa18.79■□□□□ 0.6
TPM1-205ENST00000357980 KSR1Q8IVT5 923 aa18.79■□□□□ 0.6
TPM1-205ENST00000357980 SLC17A8Q8NDX2 589 aa18.79■□□□□ 0.6
TPM1-205ENST00000357980 SPIRE2Q8WWL2 714 aa18.79■□□□□ 0.6
TPM1-205ENST00000357980 SLC7A3Q8WY07 619 aa18.79■□□□□ 0.6
TPM1-205ENST00000357980 ERAP1Q9NZ08 941 aa18.79■□□□□ 0.6
TPM1-205ENST00000357980 SIP14410 1827 aa18.79■□□□□ 0.6
TPM1-205ENST00000357980 TEX33O43247 280 aa18.79■□□□□ 0.6
TPM1-205ENST00000357980 PPFIA4O75335 1185 aa18.79■□□□□ 0.6
TPM1-205ENST00000357980 VEGFBP49765 207 aa18.79■□□□□ 0.6
TPM1-205ENST00000357980 GTF2BQ00403 316 aa18.79■□□□□ 0.6
TPM1-205ENST00000357980 DMP1Q13316 513 aaPredicted RBP18.79■□□□□ 0.6
TPM1-205ENST00000357980 OR6J1Q8NGC5 347 aa18.79■□□□□ 0.6
TPM1-205ENST00000357980 POLR3FQ9H1D9 316 aaPredicted RBP18.79■□□□□ 0.6
TPM1-205ENST00000357980 GABRQQ9UN88 632 aa18.79■□□□□ 0.6
TPM1-205ENST00000357980 MAFO75444 373 aaPredicted RBP18.78■□□□□ 0.6
TPM1-205ENST00000357980 MMP3P08254 477 aa18.78■□□□□ 0.6
TPM1-205ENST00000357980 PBX1P40424 430 aa18.78■□□□□ 0.6
TPM1-205ENST00000357980 SP3Q02447 781 aa18.78■□□□□ 0.6
TPM1-205ENST00000357980 NFIL3Q16649 462 aa18.78■□□□□ 0.6
TPM1-205ENST00000357980 FILIP1LQ4L180 1135 aa18.78■□□□□ 0.6
TPM1-205ENST00000357980 HAUS6Q7Z4H7 955 aa18.78■□□□□ 0.6
TPM1-205ENST00000357980 TMEM161BQ8NDZ6 487 aa18.78■□□□□ 0.6
TPM1-205ENST00000357980 TUBGCP2Q9BSJ2 902 aa18.78■□□□□ 0.6
TPM1-205ENST00000357980 C16orf70Q9BSU1 422 aa18.78■□□□□ 0.6
TPM1-205ENST00000357980 VPS16Q9H269 839 aa18.78■□□□□ 0.6
TPM1-205ENST00000357980 IKZF4Q9H2S9 585 aa18.78■□□□□ 0.6
TPM1-205ENST00000357980 IMPACTQ9P2X3 320 aa18.78■□□□□ 0.6
TPM1-205ENST00000357980 CENPFP49454 3210 aa18.77■□□□□ 0.6
TPM1-205ENST00000357980 N4BP3O15049 544 aa18.77■□□□□ 0.6
TPM1-205ENST00000357980 SLC16A4O15374 487 aa18.77■□□□□ 0.6
TPM1-205ENST00000357980 CALUO43852 315 aaPredicted RBP18.77■□□□□ 0.6
TPM1-205ENST00000357980 NR2F2P24468 414 aa18.77■□□□□ 0.6
TPM1-205ENST00000357980 ARL2P36404 184 aa18.77■□□□□ 0.6
TPM1-205ENST00000357980 FLT3LGP49771 235 aa18.77■□□□□ 0.6
TPM1-205ENST00000357980 PTPN21Q16825 1174 aa18.77■□□□□ 0.6
TPM1-205ENST00000357980 CCDC186Q7Z3E2 898 aa18.77■□□□□ 0.6
TPM1-205ENST00000357980 TMC6Q7Z403 805 aa18.77■□□□□ 0.6
TPM1-205ENST00000357980 FILIP1Q7Z7B0 1213 aa18.77■□□□□ 0.6
TPM1-205ENST00000357980 CREBRFQ8IUR6 639 aa18.77■□□□□ 0.6
TPM1-205ENST00000357980 RNPEPQ9H4A4 650 aa18.77■□□□□ 0.6
TPM1-205ENST00000357980 RNF186Q9NXI6 227 aa18.77■□□□□ 0.6
TPM1-205ENST00000357980 LGALS16A8MUM7 142 aa18.77■□□□□ 0.59
TPM1-205ENST00000357980 HBP1O60381 514 aa18.77■□□□□ 0.59
TPM1-205ENST00000357980 TRPA1O75762 1119 aa18.77■□□□□ 0.59
TPM1-205ENST00000357980 ZNF286BP0CG31 522 aa18.77■□□□□ 0.59
TPM1-205ENST00000357980 SMTNP53814 917 aa18.77■□□□□ 0.59
TPM1-205ENST00000357980 MARSP56192 900 aaKnown RBP18.77■□□□□ 0.59
TPM1-205ENST00000357980 ADAM9Q13443 819 aa18.77■□□□□ 0.59
TPM1-205ENST00000357980 TMEM143Q96AN5 459 aa18.77■□□□□ 0.59
TPM1-205ENST00000357980 GBP3Q9H0R5 595 aa18.77■□□□□ 0.59
TPM1-205ENST00000357980 ADGRA3Q8IWK6 1321 aa18.76■□□□□ 0.59
TPM1-205ENST00000357980 IGKV6-21A0A0C4DH24 114 aa18.76■□□□□ 0.59
TPM1-205ENST00000357980 A6NJR5 290 aa18.76■□□□□ 0.59
TPM1-205ENST00000357980 CCDC169A6NNP5 214 aa18.76■□□□□ 0.59
TPM1-205ENST00000357980 NR3C1P04150 777 aa18.76■□□□□ 0.59
TPM1-205ENST00000357980 HTRA3P83110 453 aa18.76■□□□□ 0.59
TPM1-205ENST00000357980 PRKCZQ05513 592 aa18.76■□□□□ 0.59
TPM1-205ENST00000357980 TBC1D8BQ0IIM8 1120 aa18.76■□□□□ 0.59
TPM1-205ENST00000357980 MIIPQ5JXC2 388 aa18.76■□□□□ 0.59
TPM1-205ENST00000357980 TRIB2Q92519 343 aa18.76■□□□□ 0.59
TPM1-205ENST00000357980 KCNN1Q92952 543 aa18.76■□□□□ 0.59
TPM1-205ENST00000357980 HVCN1Q96D96 273 aa18.76■□□□□ 0.59
TPM1-205ENST00000357980 KIFC3Q9BVG8 833 aa18.76■□□□□ 0.59
TPM1-205ENST00000357980 KMT5AQ9NQR1 393 aa18.76■□□□□ 0.59
TPM1-205ENST00000357980 ARHGAP28Q9P2N2 729 aa18.76■□□□□ 0.59
TPM1-205ENST00000357980 TRPC6Q9Y210 931 aa18.76■□□□□ 0.59
TPM1-205ENST00000357980 HTTP42858 3142 aa18.75■□□□□ 0.59
TPM1-205ENST00000357980 CETN3O15182 167 aa18.75■□□□□ 0.59
TPM1-205ENST00000357980 GAS2O43903 313 aaKnown RBP18.75■□□□□ 0.59
TPM1-205ENST00000357980 GNA14O95837 355 aa18.75■□□□□ 0.59
TPM1-205ENST00000357980 MTIF2P46199 727 aaKnown RBP18.75■□□□□ 0.59
TPM1-205ENST00000357980 DGKDQ16760 1214 aa18.75■□□□□ 0.59
TPM1-205ENST00000357980 SPECC1LQ69YQ0 1117 aa18.75■□□□□ 0.59
TPM1-205ENST00000357980 TLK2Q86UE8 772 aa18.75■□□□□ 0.59
TPM1-205ENST00000357980 ASAP3Q8TDY4 903 aa18.75■□□□□ 0.59
TPM1-205ENST00000357980 LENG1Q96BZ8 264 aaPredicted RBP18.75■□□□□ 0.59
TPM1-205ENST00000357980 IFT74Q96LB3 600 aa18.75■□□□□ 0.59
TPM1-205ENST00000357980 ACCSQ96QU6 501 aa18.75■□□□□ 0.59
TPM1-205ENST00000357980 TMEM206Q9H813 350 aa18.75■□□□□ 0.59
TPM1-205ENST00000357980 AGPAT3Q9NRZ7 376 aa18.75■□□□□ 0.59
TPM1-205ENST00000357980 DYNC1LI2O43237 492 aaPredicted RBP18.74■□□□□ 0.59
TPM1-205ENST00000357980 PRKCSHP14314 528 aaPredicted RBP18.74■□□□□ 0.59
TPM1-205ENST00000357980 GLRA2P23416 452 aa18.74■□□□□ 0.59
TPM1-205ENST00000357980 TBX2Q13207 712 aaPredicted RBP18.74■□□□□ 0.59
TPM1-205ENST00000357980 KIF22Q14807 665 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms