RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 CHUKO15111 745 aa19.22■□□□□ 0.67
RTN4-204ENST00000357732 GCNT3O95395 438 aa19.22■□□□□ 0.67
RTN4-204ENST00000357732 BYSLQ13895 437 aaKnown RBP19.22■□□□□ 0.67
RTN4-204ENST00000357732 TCEAL1Q15170 157 aa19.22■□□□□ 0.67
RTN4-204ENST00000357732 PPP2R5AQ15172 486 aa19.22■□□□□ 0.67
RTN4-204ENST00000357732 GKAP1Q5VSY0 366 aaPredicted RBP19.22■□□□□ 0.67
RTN4-204ENST00000357732 STXBP4Q6ZWJ1 553 aa19.22■□□□□ 0.67
RTN4-204ENST00000357732 OR2W6PQ8NHA6 318 aa19.22■□□□□ 0.67
RTN4-204ENST00000357732 TATDN2Q93075 761 aa19.22■□□□□ 0.67
RTN4-204ENST00000357732 MYCBPQ99417 103 aaPredicted RBP19.22■□□□□ 0.67
RTN4-204ENST00000357732 USP40Q9NVE5 1235 aa19.22■□□□□ 0.67
RTN4-204ENST00000357732 NOVA2Q9UNW9 492 aaKnown RBP19.22■□□□□ 0.67
RTN4-204ENST00000357732 RABGAP1Q9Y3P9 1069 aa19.22■□□□□ 0.67
RTN4-204ENST00000357732 FGGP02679 453 aa19.21■□□□□ 0.67
RTN4-204ENST00000357732 ITGA4P13612 1032 aa19.21■□□□□ 0.67
RTN4-204ENST00000357732 MUTP22033 750 aa19.21■□□□□ 0.67
RTN4-204ENST00000357732 PSMC6P62333 389 aa19.21■□□□□ 0.67
RTN4-204ENST00000357732 KRT71Q3SY84 523 aa19.21■□□□□ 0.67
RTN4-204ENST00000357732 HHIPL2Q6UWX4 724 aa19.21■□□□□ 0.67
RTN4-204ENST00000357732 LNX1Q8TBB1 728 aaPredicted RBP19.21■□□□□ 0.67
RTN4-204ENST00000357732 RASAL2Q9UJF2 1139 aa19.21■□□□□ 0.67
RTN4-204ENST00000357732 FRMPD4Q14CM0 1322 aa19.21■□□□□ 0.67
RTN4-204ENST00000357732 THSD7AQ9UPZ6 1657 aa19.21■□□□□ 0.67
RTN4-204ENST00000357732 SPDYE3A6NKU9 549 aa19.21■□□□□ 0.67
RTN4-204ENST00000357732 DDX3YO15523 660 aaKnown RBP19.21■□□□□ 0.67
RTN4-204ENST00000357732 BUB1BO60566 1050 aaPredicted RBP19.21■□□□□ 0.67
RTN4-204ENST00000357732 CYP3A4P08684 503 aa19.21■□□□□ 0.67
RTN4-204ENST00000357732 GHRP10912 638 aa19.21■□□□□ 0.67
RTN4-204ENST00000357732 SCNN1DP51172 638 aa19.21■□□□□ 0.67
RTN4-204ENST00000357732 DUPD1Q68J44 220 aa19.21■□□□□ 0.67
RTN4-204ENST00000357732 RHOT2Q8IXI1 618 aa19.21■□□□□ 0.67
RTN4-204ENST00000357732 FAM186BQ8IYM0 893 aa19.21■□□□□ 0.67
RTN4-204ENST00000357732 OLIG1Q8TAK6 271 aa19.21■□□□□ 0.67
RTN4-204ENST00000357732 SLC35G2Q8TBE7 412 aa19.21■□□□□ 0.67
RTN4-204ENST00000357732 PGM2Q96G03 612 aa19.21■□□□□ 0.67
RTN4-204ENST00000357732 ERP44Q9BS26 406 aa19.21■□□□□ 0.67
RTN4-204ENST00000357732 TUFT1Q9NNX1 390 aa19.21■□□□□ 0.67
RTN4-204ENST00000357732 VAV3Q9UKW4 847 aa19.21■□□□□ 0.67
RTN4-204ENST00000357732 TGFB1I1O43294 461 aa19.2■□□□□ 0.66
RTN4-204ENST00000357732 DR1Q01658 176 aa19.2■□□□□ 0.66
RTN4-204ENST00000357732 IFFO1Q0D2I5 559 aa19.2■□□□□ 0.66
RTN4-204ENST00000357732 PLS1Q14651 629 aa19.2■□□□□ 0.66
RTN4-204ENST00000357732 ATP8B4Q8TF62 1192 aa19.2■□□□□ 0.66
RTN4-204ENST00000357732 RAPGEF5Q92565 580 aa19.2■□□□□ 0.66
RTN4-204ENST00000357732 SEC16BQ96JE7 1060 aa19.2■□□□□ 0.66
RTN4-204ENST00000357732 KLC4Q9NSK0 619 aa19.2■□□□□ 0.66
RTN4-204ENST00000357732 AJAP1Q9UKB5 411 aaPredicted RBP19.2■□□□□ 0.66
RTN4-204ENST00000357732 MIF4GDA9UHW6 222 aaKnown RBP19.2■□□□□ 0.66
RTN4-204ENST00000357732 FLT3P36888 993 aa19.2■□□□□ 0.66
RTN4-204ENST00000357732 CASP4P49662 377 aa19.2■□□□□ 0.66
RTN4-204ENST00000357732 MAGOHP61326 146 aaKnown RBP19.2■□□□□ 0.66
RTN4-204ENST00000357732 MAGOHBQ96A72 148 aaKnown RBP19.2■□□□□ 0.66
RTN4-204ENST00000357732 FAM129AQ9BZQ8 928 aa19.2■□□□□ 0.66
RTN4-204ENST00000357732 BHMT2Q9H2M3 363 aa19.2■□□□□ 0.66
RTN4-204ENST00000357732 KCND2Q9NZV8 630 aa19.2■□□□□ 0.66
RTN4-204ENST00000357732 BCCIPQ9P287 314 aaKnown RBP eCLIP19.2■□□□□ 0.66
RTN4-204ENST00000357732 PARP2Q9UGN5 583 aa19.2■□□□□ 0.66
RTN4-204ENST00000357732 PFASO15067 1338 aa19.2■□□□□ 0.66
RTN4-204ENST00000357732 SYNGAP1Q96PV0 1343 aa19.2■□□□□ 0.66
RTN4-204ENST00000357732 ANKRD62A6NC57 917 aa19.19■□□□□ 0.66
RTN4-204ENST00000357732 CCDC169A6NNP5 214 aa19.19■□□□□ 0.66
RTN4-204ENST00000357732 TOM1O60784 492 aa19.19■□□□□ 0.66
RTN4-204ENST00000357732 FMO5P49326 533 aa19.19■□□□□ 0.66
RTN4-204ENST00000357732 MAGEC3Q8TD91 643 aa19.19■□□□□ 0.66
RTN4-204ENST00000357732 PABPC3Q9H361 631 aaKnown RBP19.19■□□□□ 0.66
RTN4-204ENST00000357732 KDM4CQ9H3R0 1056 aa19.19■□□□□ 0.66
RTN4-204ENST00000357732 CNOT7Q9UIV1 285 aaKnown RBP19.19■□□□□ 0.66
RTN4-204ENST00000357732 MEIS1O00470 390 aa19.19■□□□□ 0.66
RTN4-204ENST00000357732 PPEF1O14829 653 aaPredicted RBP19.19■□□□□ 0.66
RTN4-204ENST00000357732 GGPS1O95749 300 aa19.19■□□□□ 0.66
RTN4-204ENST00000357732 MYBPC2Q14324 1141 aa19.19■□□□□ 0.66
RTN4-204ENST00000357732 ERMARDQ5T6L9 678 aa19.19■□□□□ 0.66
RTN4-204ENST00000357732 SLFN13Q68D06 897 aa19.19■□□□□ 0.66
RTN4-204ENST00000357732 NEK9Q8TD19 979 aa19.19■□□□□ 0.66
RTN4-204ENST00000357732 POLD4Q9HCU8 107 aa19.19■□□□□ 0.66
RTN4-204ENST00000357732 ZDHHC18Q9NUE0 388 aa19.19■□□□□ 0.66
RTN4-204ENST00000357732 PCDHB13Q9Y5F0 798 aa19.19■□□□□ 0.66
RTN4-204ENST00000357732 ZMYM2Q9UBW7 1377 aa19.19■□□□□ 0.66
RTN4-204ENST00000357732 RAD21O60216 631 aa19.18■□□□□ 0.66
RTN4-204ENST00000357732 TRAF1Q13077 416 aa19.18■□□□□ 0.66
RTN4-204ENST00000357732 ANKRD20A8PQ5CZ79 823 aa19.18■□□□□ 0.66
RTN4-204ENST00000357732 C11orf63Q6NUN7 778 aa19.18■□□□□ 0.66
RTN4-204ENST00000357732 RINT1Q6NUQ1 792 aa19.18■□□□□ 0.66
RTN4-204ENST00000357732 HS2ST1Q7LGA3 356 aa19.18■□□□□ 0.66
RTN4-204ENST00000357732 GMCL1P1Q8NEA9 526 aa19.18■□□□□ 0.66
RTN4-204ENST00000357732 CCDC114Q96M63 670 aa19.18■□□□□ 0.66
RTN4-204ENST00000357732 RUNDC3BQ96NL0 473 aa19.18■□□□□ 0.66
RTN4-204ENST00000357732 EIF2AK1Q9BQI3 630 aaKnown RBP19.18■□□□□ 0.66
RTN4-204ENST00000357732 RUSC1Q9BVN2 902 aa19.18■□□□□ 0.66
RTN4-204ENST00000357732 APEX2Q9UBZ4 518 aa19.18■□□□□ 0.66
RTN4-204ENST00000357732 CNOT8Q9UFF9 292 aaKnown RBP19.18■□□□□ 0.66
RTN4-204ENST00000357732 DNAJC12Q9UKB3 198 aa19.18■□□□□ 0.66
RTN4-204ENST00000357732 FAM86B1E9PN63 330 aa19.18■□□□□ 0.66
RTN4-204ENST00000357732 MSH4O15457 936 aa19.18■□□□□ 0.66
RTN4-204ENST00000357732 FAM13AO94988 1023 aa19.18■□□□□ 0.66
RTN4-204ENST00000357732 FAM86B2P0C5J1 330 aa19.18■□□□□ 0.66
RTN4-204ENST00000357732 KIF22Q14807 665 aa19.18■□□□□ 0.66
RTN4-204ENST00000357732 DRAP1Q14919 205 aaPredicted RBP19.18■□□□□ 0.66
RTN4-204ENST00000357732 CDC42EP5Q6NZY7 148 aa19.18■□□□□ 0.66
RTN4-204ENST00000357732 GLYCTKQ8IVS8 523 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms