RNA–Protein interactions for RNA: ENST00000357412.2

LINC01560-201, Transcript of long intergenic non-protein coding RNA 1560, humanhuman

BASIC

Gene LINC01560, Length 1,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560-201ENST00000357412 MICAL1Q8TDZ2 1067 aa11.54□□□□□ -0.56
LINC01560-201ENST00000357412 MBOAT7Q96N66 472 aa11.54□□□□□ -0.56
LINC01560-201ENST00000357412 CASD1Q96PB1 797 aa11.54□□□□□ -0.56
LINC01560-201ENST00000357412 CEP89Q96ST8 783 aa11.54□□□□□ -0.56
LINC01560-201ENST00000357412 POP1Q99575 1024 aaKnown RBP11.54□□□□□ -0.56
LINC01560-201ENST00000357412 LARP6Q9BRS8 491 aaKnown RBP11.54□□□□□ -0.56
LINC01560-201ENST00000357412 TEKT3Q9BXF9 490 aa11.54□□□□□ -0.56
LINC01560-201ENST00000357412 UPF3BQ9BZI7 483 aaKnown RBP11.54□□□□□ -0.56
LINC01560-201ENST00000357412 TMEM117Q9H0C3 514 aa11.54□□□□□ -0.56
LINC01560-201ENST00000357412 TLR9Q9NR96 1032 aa11.54□□□□□ -0.56
LINC01560-201ENST00000357412 BARX2Q9UMQ3 279 aaPredicted RBP11.54□□□□□ -0.56
LINC01560-201ENST00000357412 COL4A4P53420 1690 aaPredicted RBP11.54□□□□□ -0.56
LINC01560-201ENST00000357412 MYO7AQ13402 2215 aa11.54□□□□□ -0.56
LINC01560-201ENST00000357412 ZSCAN20P17040 1043 aaPredicted RBP11.53□□□□□ -0.56
LINC01560-201ENST00000357412 LAG3P18627 525 aa11.53□□□□□ -0.56
LINC01560-201ENST00000357412 RBM10P98175 930 aaKnown RBP11.53□□□□□ -0.56
LINC01560-201ENST00000357412 PLCB3Q01970 1234 aa11.53□□□□□ -0.56
LINC01560-201ENST00000357412 SSRP1Q08945 709 aaKnown RBP11.53□□□□□ -0.56
LINC01560-201ENST00000357412 DRP2Q13474 957 aa11.53□□□□□ -0.56
LINC01560-201ENST00000357412 CSPP1Q1MSJ5 1256 aa11.53□□□□□ -0.56
LINC01560-201ENST00000357412 HERC4Q5GLZ8 1057 aaPredicted RBP11.53□□□□□ -0.56
LINC01560-201ENST00000357412 ECHDC2Q86YB7 292 aa11.53□□□□□ -0.56
LINC01560-201ENST00000357412 TRIM22Q8IYM9 498 aa11.53□□□□□ -0.56
LINC01560-201ENST00000357412 THNSL1Q8IYQ7 743 aa11.53□□□□□ -0.56
LINC01560-201ENST00000357412 DAGLBQ8NCG7 672 aa11.53□□□□□ -0.56
LINC01560-201ENST00000357412 RDM1Q8NG50 284 aa11.53□□□□□ -0.56
LINC01560-201ENST00000357412 ZNF274Q96GC6 653 aaPredicted RBP11.53□□□□□ -0.56
LINC01560-201ENST00000357412 AIFM3Q96NN9 605 aa11.53□□□□□ -0.56
LINC01560-201ENST00000357412 NIFKQ9BYG3 293 aaKnown RBP11.53□□□□□ -0.56
LINC01560-201ENST00000357412 C22orf23Q9BZE7 217 aa11.53□□□□□ -0.56
LINC01560-201ENST00000357412 TLE6Q9H808 572 aa11.53□□□□□ -0.56
LINC01560-201ENST00000357412 MUTYHQ9UIF7 546 aa11.53□□□□□ -0.56
LINC01560-201ENST00000357412 PIEZO1Q92508 2521 aa11.53□□□□□ -0.56
LINC01560-201ENST00000357412 IGKV6-21A0A0C4DH24 114 aa11.52□□□□□ -0.57
LINC01560-201ENST00000357412 A0A0U1RQF3 1178 aa11.52□□□□□ -0.57
LINC01560-201ENST00000357412 TMEM150BA6NC51 233 aa11.52□□□□□ -0.57
LINC01560-201ENST00000357412 HOXA2O43364 376 aa11.52□□□□□ -0.57
LINC01560-201ENST00000357412 DEXIO95424 95 aa11.52□□□□□ -0.57
LINC01560-201ENST00000357412 FGFR4P22455 802 aa11.52□□□□□ -0.57
LINC01560-201ENST00000357412 TBC1D8BQ0IIM8 1120 aa11.52□□□□□ -0.57
LINC01560-201ENST00000357412 KCNC3Q14003 757 aa11.52□□□□□ -0.57
LINC01560-201ENST00000357412 DUSP6Q16828 381 aa11.52□□□□□ -0.57
LINC01560-201ENST00000357412 XKR3Q5GH77 459 aa11.52□□□□□ -0.57
LINC01560-201ENST00000357412 MOXD1Q6UVY6 613 aa11.52□□□□□ -0.57
LINC01560-201ENST00000357412 ZNF598Q86UK7 904 aaKnown RBP11.52□□□□□ -0.57
LINC01560-201ENST00000357412 RNF135Q8IUD6 432 aa11.52□□□□□ -0.57
LINC01560-201ENST00000357412 BLIDQ8IZY5 108 aa11.52□□□□□ -0.57
LINC01560-201ENST00000357412 ETNPPLQ8TBG4 499 aa11.52□□□□□ -0.57
LINC01560-201ENST00000357412 MRPS27Q92552 414 aaKnown RBP11.52□□□□□ -0.57
LINC01560-201ENST00000357412 CDCA3Q99618 268 aaPredicted RBP11.52□□□□□ -0.57
LINC01560-201ENST00000357412 SH2D3AQ9BRG2 576 aa11.52□□□□□ -0.57
LINC01560-201ENST00000357412 TM6SF1Q9BZW5 370 aa11.52□□□□□ -0.57
LINC01560-201ENST00000357412 LZTS1Q9Y250 596 aa11.52□□□□□ -0.57
LINC01560-201ENST00000357412 USP15Q9Y4E8 981 aaPredicted RBP11.52□□□□□ -0.57
LINC01560-201ENST00000357412 CYP46A1Q9Y6A2 500 aa11.52□□□□□ -0.57
LINC01560-201ENST00000357412 TCF20Q9UGU0 1960 aaKnown RBP11.51□□□□□ -0.57
LINC01560-201ENST00000357412 LOC730098B7Z3J9 87 aa11.51□□□□□ -0.57
LINC01560-201ENST00000357412 CPLX1O14810 134 aa11.51□□□□□ -0.57
LINC01560-201ENST00000357412 CSDE1O75534 798 aaKnown RBP11.51□□□□□ -0.57
LINC01560-201ENST00000357412 ATF7P17544 494 aaPredicted RBP11.51□□□□□ -0.57
LINC01560-201ENST00000357412 PBX3P40426 434 aa11.51□□□□□ -0.57
LINC01560-201ENST00000357412 STK3Q13188 491 aa11.51□□□□□ -0.57
LINC01560-201ENST00000357412 CBX2Q14781 532 aaPredicted RBP11.51□□□□□ -0.57
LINC01560-201ENST00000357412 MTERF2Q49AM1 385 aa11.51□□□□□ -0.57
LINC01560-201ENST00000357412 CLLU1OSQ5K130 101 aa11.51□□□□□ -0.57
LINC01560-201ENST00000357412 GALNT17Q6IS24 598 aa11.51□□□□□ -0.57
LINC01560-201ENST00000357412 PDE12Q6L8Q7 609 aaKnown RBP11.51□□□□□ -0.57
LINC01560-201ENST00000357412 KCNT2Q6UVM3 1135 aa11.51□□□□□ -0.57
LINC01560-201ENST00000357412 TMEM184AQ6ZMB5 413 aa11.51□□□□□ -0.57
LINC01560-201ENST00000357412 MIER3Q7Z3K6 550 aa11.51□□□□□ -0.57
LINC01560-201ENST00000357412 FAM177A1Q8N128 213 aaPredicted RBP11.51□□□□□ -0.57
LINC01560-201ENST00000357412 LRRC43Q8N309 656 aa11.51□□□□□ -0.57
LINC01560-201ENST00000357412 NLRP7Q8WX94 980 aa11.51□□□□□ -0.57
LINC01560-201ENST00000357412 SUSD6Q92537 303 aa11.51□□□□□ -0.57
LINC01560-201ENST00000357412 TCF25Q9BQ70 676 aa11.51□□□□□ -0.57
LINC01560-201ENST00000357412 PUF60Q9UHX1 559 aaKnown RBP11.51□□□□□ -0.57
LINC01560-201ENST00000357412 MICAL3Q7RTP6 2002 aa11.51□□□□□ -0.57
LINC01560-201ENST00000357412 TTC3P53804 2025 aa11.5□□□□□ -0.57
LINC01560-201ENST00000357412 HIDE1A8MVS5 230 aa11.5□□□□□ -0.57
LINC01560-201ENST00000357412 SLC37A4O43826 429 aa11.5□□□□□ -0.57
LINC01560-201ENST00000357412 EOMESO95936 686 aa11.5□□□□□ -0.57
LINC01560-201ENST00000357412 CDC42EP1Q00587 391 aa11.5□□□□□ -0.57
LINC01560-201ENST00000357412 SCRN1Q12765 414 aa11.5□□□□□ -0.57
LINC01560-201ENST00000357412 NONOQ15233 471 aaKnown RBP eCLIP11.5□□□□□ -0.57
LINC01560-201ENST00000357412 INF2Q27J81 1249 aa11.5□□□□□ -0.57
LINC01560-201ENST00000357412 PLPP4Q5VZY2 271 aa11.5□□□□□ -0.57
LINC01560-201ENST00000357412 HFE2Q6ZVN8 426 aa11.5□□□□□ -0.57
LINC01560-201ENST00000357412 ANO5Q75V66 913 aa11.5□□□□□ -0.57
LINC01560-201ENST00000357412 ABI1Q8IZP0 508 aa11.5□□□□□ -0.57
LINC01560-201ENST00000357412 RNF169Q8NCN4 708 aa11.5□□□□□ -0.57
LINC01560-201ENST00000357412 ZNF558Q96NG5 402 aa11.5□□□□□ -0.57
LINC01560-201ENST00000357412 SCLT1Q96NL6 688 aa11.5□□□□□ -0.57
LINC01560-201ENST00000357412 TRAIPQ9BWF2 469 aa11.5□□□□□ -0.57
LINC01560-201ENST00000357412 PHF7Q9BWX1 381 aaPredicted RBP11.5□□□□□ -0.57
LINC01560-201ENST00000357412 GCOM2Q9BZD3 368 aaPredicted RBP11.5□□□□□ -0.57
LINC01560-201ENST00000357412 S1PR5Q9H228 398 aa11.5□□□□□ -0.57
LINC01560-201ENST00000357412 NGRNQ9NPE2 291 aaKnown RBP11.5□□□□□ -0.57
LINC01560-201ENST00000357412 CHST12Q9NRB3 414 aa11.5□□□□□ -0.57
LINC01560-201ENST00000357412 PDRG1Q9NUG6 133 aa11.5□□□□□ -0.57
LINC01560-201ENST00000357412 SEPT9Q9UHD8 586 aaPredicted RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms