RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 SOWAHDA6NJG2 315 aa12.27□□□□□ -0.45
SPTBN1-202ENST00000356805 TMED10P49755 219 aaKnown RBP12.27□□□□□ -0.45
SPTBN1-202ENST00000356805 ACCSLQ4AC99 568 aa12.27□□□□□ -0.45
SPTBN1-202ENST00000356805 KIAA1755Q5JYT7 1200 aa12.27□□□□□ -0.45
SPTBN1-202ENST00000356805 EDEM3Q9BZQ6 932 aa12.27□□□□□ -0.45
SPTBN1-202ENST00000356805 PCDHA13Q9Y5I0 950 aa12.27□□□□□ -0.45
SPTBN1-202ENST00000356805 KDM1AO60341 852 aa12.27□□□□□ -0.45
SPTBN1-202ENST00000356805 ADD1P35611 737 aaKnown RBP12.27□□□□□ -0.45
SPTBN1-202ENST00000356805 TRMT2AQ8IZ69 625 aaKnown RBP12.27□□□□□ -0.45
SPTBN1-202ENST00000356805 GOLGA8MH3BSY2 632 aa12.26□□□□□ -0.45
SPTBN1-202ENST00000356805 CCDC22O60826 627 aa12.26□□□□□ -0.45
SPTBN1-202ENST00000356805 AARS2Q5JTZ9 985 aaKnown RBP12.26□□□□□ -0.45
SPTBN1-202ENST00000356805 ARMCX2Q7L311 632 aa12.26□□□□□ -0.45
SPTBN1-202ENST00000356805 A0A0G2JND7 137 aa12.26□□□□□ -0.45
SPTBN1-202ENST00000356805 ARIH2O95376 493 aa12.26□□□□□ -0.45
SPTBN1-202ENST00000356805 CCDC159P0C7I6 412 aa12.26□□□□□ -0.45
SPTBN1-202ENST00000356805 USP14P54578 494 aa12.26□□□□□ -0.45
SPTBN1-202ENST00000356805 RGS9BPQ6ZS82 235 aa12.26□□□□□ -0.45
SPTBN1-202ENST00000356805 PATL1Q86TB9 770 aaKnown RBP12.26□□□□□ -0.45
SPTBN1-202ENST00000356805 SNX5Q9Y5X3 404 aa12.26□□□□□ -0.45
SPTBN1-202ENST00000356805 TTLL1O95922 423 aa12.26□□□□□ -0.45
SPTBN1-202ENST00000356805 TTC17Q96AE7 1141 aa12.26□□□□□ -0.45
SPTBN1-202ENST00000356805 ETNK1Q9HBU6 452 aa12.26□□□□□ -0.45
SPTBN1-202ENST00000356805 REREQ9P2R6 1566 aa12.26□□□□□ -0.45
SPTBN1-202ENST00000356805 PDIA3P30101 505 aaKnown RBP12.26□□□□□ -0.45
SPTBN1-202ENST00000356805 HSPA2P54652 639 aa12.26□□□□□ -0.45
SPTBN1-202ENST00000356805 APOBEC2Q9Y235 224 aaKnown RBP12.26□□□□□ -0.45
SPTBN1-202ENST00000356805 EDC4Q6P2E9 1401 aaKnown RBP12.26□□□□□ -0.45
SPTBN1-202ENST00000356805 CFAP69A5D8W1 941 aa12.26□□□□□ -0.45
SPTBN1-202ENST00000356805 PDHA1P08559 390 aa12.26□□□□□ -0.45
SPTBN1-202ENST00000356805 GAP43P17677 238 aa12.26□□□□□ -0.45
SPTBN1-202ENST00000356805 RAD23BP54727 409 aa12.26□□□□□ -0.45
SPTBN1-202ENST00000356805 RINLQ6ZS11 566 aa12.26□□□□□ -0.45
SPTBN1-202ENST00000356805 THEM5Q8N1Q8 247 aa12.26□□□□□ -0.45
SPTBN1-202ENST00000356805 RASGRP4Q8TDF6 673 aa12.26□□□□□ -0.45
SPTBN1-202ENST00000356805 SH3KBP1Q96B97 665 aa12.26□□□□□ -0.45
SPTBN1-202ENST00000356805 TRIM45Q9H8W5 580 aaPredicted RBP12.26□□□□□ -0.45
SPTBN1-202ENST00000356805 ARHGEF37A1IGU5 675 aa12.26□□□□□ -0.45
SPTBN1-202ENST00000356805 SLC20A2Q08357 652 aa12.26□□□□□ -0.45
SPTBN1-202ENST00000356805 BBS9Q3SYG4 887 aa12.26□□□□□ -0.45
SPTBN1-202ENST00000356805 BEND6Q5SZJ8 279 aaPredicted RBP12.26□□□□□ -0.45
SPTBN1-202ENST00000356805 C1orf146Q5VVC0 180 aa12.26□□□□□ -0.45
SPTBN1-202ENST00000356805 RNF135Q8IUD6 432 aa12.26□□□□□ -0.45
SPTBN1-202ENST00000356805 DNAJC6O75061 913 aa12.26□□□□□ -0.45
SPTBN1-202ENST00000356805 SLC16A2P36021 539 aa12.26□□□□□ -0.45
SPTBN1-202ENST00000356805 SEPT3Q9UH03 358 aa12.26□□□□□ -0.45
SPTBN1-202ENST00000356805 HNRNPLLQ8WVV9 542 aaKnown RBP12.25□□□□□ -0.45
SPTBN1-202ENST00000356805 hCG_1984214I3L0E3 225 aa12.25□□□□□ -0.45
SPTBN1-202ENST00000356805 PJA2O43164 708 aa12.25□□□□□ -0.45
SPTBN1-202ENST00000356805 HAUS5O94927 633 aa12.25□□□□□ -0.45
SPTBN1-202ENST00000356805 ZNF713Q8N859 430 aaPredicted RBP12.25□□□□□ -0.45
SPTBN1-202ENST00000356805 ZNF507Q8TCN5 953 aa12.25□□□□□ -0.45
SPTBN1-202ENST00000356805 TAF1DQ9H5J8 278 aaPredicted RBP12.25□□□□□ -0.45
SPTBN1-202ENST00000356805 RAPGEF6Q8TEU7 1601 aa12.25□□□□□ -0.45
SPTBN1-202ENST00000356805 A0A1W2PP64 1363 aa12.25□□□□□ -0.45
SPTBN1-202ENST00000356805 BTBD18B2RXH4 712 aa12.25□□□□□ -0.45
SPTBN1-202ENST00000356805 PPP6R3Q5H9R7 873 aaPredicted RBP12.25□□□□□ -0.45
SPTBN1-202ENST00000356805 KLHL8Q9P2G9 620 aaPredicted RBP12.25□□□□□ -0.45
SPTBN1-202ENST00000356805 PALD1Q9ULE6 856 aa12.25□□□□□ -0.45
SPTBN1-202ENST00000356805 KRT87PA6NCN2 255 aa12.25□□□□□ -0.45
SPTBN1-202ENST00000356805 PPEF1O14829 653 aaPredicted RBP12.25□□□□□ -0.45
SPTBN1-202ENST00000356805 CARSP49589 748 aaKnown RBP12.25□□□□□ -0.45
SPTBN1-202ENST00000356805 MAP3K10Q02779 954 aa12.25□□□□□ -0.45
SPTBN1-202ENST00000356805 BYSLQ13895 437 aaKnown RBP12.25□□□□□ -0.45
SPTBN1-202ENST00000356805 OR6B3Q8NGW1 331 aa12.25□□□□□ -0.45
SPTBN1-202ENST00000356805 ULK4Q96C45 1275 aa12.25□□□□□ -0.45
SPTBN1-202ENST00000356805 GDF11O95390 407 aa12.25□□□□□ -0.45
SPTBN1-202ENST00000356805 SLC44A4Q53GD3 710 aa12.25□□□□□ -0.45
SPTBN1-202ENST00000356805 ARL6IP4Q66PJ3 421 aaKnown RBP12.25□□□□□ -0.45
SPTBN1-202ENST00000356805 LRIG3Q6UXM1 1119 aa12.25□□□□□ -0.45
SPTBN1-202ENST00000356805 NEURL1BA8MQ27 555 aa12.25□□□□□ -0.45
SPTBN1-202ENST00000356805 BAG6P46379 1132 aa12.25□□□□□ -0.45
SPTBN1-202ENST00000356805 TMPRSS15P98073 1019 aa12.25□□□□□ -0.45
SPTBN1-202ENST00000356805 MRPL28Q13084 256 aaKnown RBP12.25□□□□□ -0.45
SPTBN1-202ENST00000356805 KPNB1Q14974 876 aaKnown RBP12.25□□□□□ -0.45
SPTBN1-202ENST00000356805 SKIV2LQ15477 1246 aaKnown RBP12.25□□□□□ -0.45
SPTBN1-202ENST00000356805 PBXIP1Q96AQ6 731 aa12.25□□□□□ -0.45
SPTBN1-202ENST00000356805 DONSONQ9NYP3 566 aa12.25□□□□□ -0.45
SPTBN1-202ENST00000356805 KRT38O76015 456 aa12.24□□□□□ -0.45
SPTBN1-202ENST00000356805 PAPOLAP51003 745 aaKnown RBP12.24□□□□□ -0.45
SPTBN1-202ENST00000356805 ACAD11Q709F0 780 aa12.24□□□□□ -0.45
SPTBN1-202ENST00000356805 DNAJC10Q8IXB1 793 aa12.24□□□□□ -0.45
SPTBN1-202ENST00000356805 KIRREL3Q8IZU9 778 aa12.24□□□□□ -0.45
SPTBN1-202ENST00000356805 AMNQ9BXJ7 453 aa12.24□□□□□ -0.45
SPTBN1-202ENST00000356805 ADA2Q9NZK5 511 aa12.24□□□□□ -0.45
SPTBN1-202ENST00000356805 ARL2BPQ9Y2Y0 163 aa12.24□□□□□ -0.45
SPTBN1-202ENST00000356805 SCRN1Q12765 414 aa12.24□□□□□ -0.45
SPTBN1-202ENST00000356805 SMAD1Q15797 465 aaKnown RBP12.24□□□□□ -0.45
SPTBN1-202ENST00000356805 CASS4Q9NQ75 786 aa12.24□□□□□ -0.45
SPTBN1-202ENST00000356805 CCNE1P24864 410 aa12.24□□□□□ -0.45
SPTBN1-202ENST00000356805 AARSP49588 968 aaKnown RBP eCLIP12.24□□□□□ -0.45
SPTBN1-202ENST00000356805 POU5F1BQ06416 359 aa12.24□□□□□ -0.45
SPTBN1-202ENST00000356805 SCN4BQ8IWT1 228 aa12.24□□□□□ -0.45
SPTBN1-202ENST00000356805 ZNF579Q8NAF0 562 aaKnown RBP12.24□□□□□ -0.45
SPTBN1-202ENST00000356805 ASPSCR1Q9BZE9 553 aa12.24□□□□□ -0.45
SPTBN1-202ENST00000356805 HEY1Q9Y5J3 304 aa12.24□□□□□ -0.45
SPTBN1-202ENST00000356805 DNMT1P26358 1616 aaKnown RBP12.24□□□□□ -0.45
SPTBN1-202ENST00000356805 KRT75O95678 551 aa12.24□□□□□ -0.45
SPTBN1-202ENST00000356805 MORF4L2Q15014 288 aa12.24□□□□□ -0.45
SPTBN1-202ENST00000356805 KLHL38Q2WGJ6 581 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms