RNA–Protein interactions for RNA: ENST00000356660.8

BDNF-202, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,018 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-202ENST00000356660 KDM3AQ9Y4C1 1321 aa13.52□□□□□ -0.24
BDNF-202ENST00000356660 F8VZ95 297 aa13.52□□□□□ -0.24
BDNF-202ENST00000356660 LMNB1P20700 586 aa13.52□□□□□ -0.24
BDNF-202ENST00000356660 NPY5RQ15761 445 aa13.52□□□□□ -0.24
BDNF-202ENST00000356660 CERKLQ49MI3 558 aaPredicted RBP13.52□□□□□ -0.24
BDNF-202ENST00000356660 KIAA1755Q5JYT7 1200 aa13.52□□□□□ -0.24
BDNF-202ENST00000356660 HHATQ5VTY9 493 aa13.52□□□□□ -0.24
BDNF-202ENST00000356660 PPFIBP2Q8ND30 876 aa13.52□□□□□ -0.24
BDNF-202ENST00000356660 TPCN2Q8NHX9 752 aa13.52□□□□□ -0.24
BDNF-202ENST00000356660 TATDN2Q93075 761 aa13.52□□□□□ -0.24
BDNF-202ENST00000356660 INPP4AQ96PE3 977 aaPredicted RBP13.52□□□□□ -0.24
BDNF-202ENST00000356660 INTUQ9ULD6 942 aa13.52□□□□□ -0.24
BDNF-202ENST00000356660 MINPP1Q9UNW1 487 aa13.52□□□□□ -0.24
BDNF-202ENST00000356660 USTQ9Y2C2 406 aa13.52□□□□□ -0.24
BDNF-202ENST00000356660 RIC1Q4ADV7 1423 aa13.52□□□□□ -0.24
BDNF-202ENST00000356660 CFAP73A6NFT4 308 aa13.52□□□□□ -0.25
BDNF-202ENST00000356660 SLC37A4O43826 429 aa13.52□□□□□ -0.25
BDNF-202ENST00000356660 TMC3Q7Z5M5 1100 aa13.52□□□□□ -0.25
BDNF-202ENST00000356660 CLEC10AQ8IUN9 316 aa13.52□□□□□ -0.25
BDNF-202ENST00000356660 VPS52Q8N1B4 723 aa13.52□□□□□ -0.25
BDNF-202ENST00000356660 SLC35G2Q8TBE7 412 aa13.52□□□□□ -0.25
BDNF-202ENST00000356660 CEP63Q96MT8 703 aa13.52□□□□□ -0.25
BDNF-202ENST00000356660 ATP6V0A4Q9HBG4 840 aa13.52□□□□□ -0.25
BDNF-202ENST00000356660 ARHGEF10LQ9HCE6 1279 aa13.52□□□□□ -0.25
BDNF-202ENST00000356660 ABCF3Q9NUQ8 709 aa13.52□□□□□ -0.25
BDNF-202ENST00000356660 WDR91A4D1P6 747 aa13.52□□□□□ -0.25
BDNF-202ENST00000356660 USP17L15C9J2P7 530 aa13.52□□□□□ -0.25
BDNF-202ENST00000356660 USP17L13C9JLJ4 530 aa13.52□□□□□ -0.25
BDNF-202ENST00000356660 USP17L11C9JVI0 530 aa13.52□□□□□ -0.25
BDNF-202ENST00000356660 USP17L18D6R9N7 530 aa13.52□□□□□ -0.25
BDNF-202ENST00000356660 USP17L22D6RA61 530 aa13.52□□□□□ -0.25
BDNF-202ENST00000356660 USP17L17D6RBQ6 530 aa13.52□□□□□ -0.25
BDNF-202ENST00000356660 USP17L19D6RCP7 530 aa13.52□□□□□ -0.25
BDNF-202ENST00000356660 USP17L20D6RJB6 530 aa13.52□□□□□ -0.25
BDNF-202ENST00000356660 PJA2O43164 708 aa13.52□□□□□ -0.25
BDNF-202ENST00000356660 LUC7L3O95232 432 aaKnown RBP13.52□□□□□ -0.25
BDNF-202ENST00000356660 GDF11O95390 407 aa13.52□□□□□ -0.25
BDNF-202ENST00000356660 ATP2A2P16615 1042 aaKnown RBP13.52□□□□□ -0.25
BDNF-202ENST00000356660 SNAP25P60880 206 aa13.52□□□□□ -0.25
BDNF-202ENST00000356660 USP17L24Q0WX57 530 aa13.52□□□□□ -0.25
BDNF-202ENST00000356660 TMED2Q15363 201 aa13.52□□□□□ -0.25
BDNF-202ENST00000356660 DLGAP5Q15398 846 aa13.52□□□□□ -0.25
BDNF-202ENST00000356660 HP1BP3Q5SSJ5 553 aaPredicted RBP13.52□□□□□ -0.25
BDNF-202ENST00000356660 USP17L6PQ6QN14 398 aa13.52□□□□□ -0.25
BDNF-202ENST00000356660 SLC17A8Q8NDX2 589 aa13.52□□□□□ -0.25
BDNF-202ENST00000356660 RUNDC3BQ96NL0 473 aa13.52□□□□□ -0.25
BDNF-202ENST00000356660 TSC22D3Q99576 134 aa13.52□□□□□ -0.25
BDNF-202ENST00000356660 NEUROG2Q9H2A3 272 aa13.52□□□□□ -0.25
BDNF-202ENST00000356660 METTL14Q9HCE5 456 aaKnown RBP13.52□□□□□ -0.25
BDNF-202ENST00000356660 DNAJC12Q9UKB3 198 aa13.52□□□□□ -0.25
BDNF-202ENST00000356660 USP15Q9Y4E8 981 aaPredicted RBP13.52□□□□□ -0.25
BDNF-202ENST00000356660 SHBGP04278 402 aa13.51□□□□□ -0.25
BDNF-202ENST00000356660 RAD23BP54727 409 aa13.51□□□□□ -0.25
BDNF-202ENST00000356660 KCNMA1Q12791 1236 aa13.51□□□□□ -0.25
BDNF-202ENST00000356660 SLFN13Q68D06 897 aa13.51□□□□□ -0.25
BDNF-202ENST00000356660 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.51□□□□□ -0.25
BDNF-202ENST00000356660 HOOK2Q96ED9 719 aa13.51□□□□□ -0.25
BDNF-202ENST00000356660 OSBPL1AQ9BXW6 950 aa13.51□□□□□ -0.25
BDNF-202ENST00000356660 FAM129AQ9BZQ8 928 aa13.51□□□□□ -0.25
BDNF-202ENST00000356660 SEMA4AQ9H3S1 761 aa13.51□□□□□ -0.25
BDNF-202ENST00000356660 UPP2O95045 317 aa13.51□□□□□ -0.25
BDNF-202ENST00000356660 DESP17661 470 aa13.51□□□□□ -0.25
BDNF-202ENST00000356660 KLRK1P26718 216 aa13.51□□□□□ -0.25
BDNF-202ENST00000356660 CCDC137Q6PK04 289 aaKnown RBP13.51□□□□□ -0.25
BDNF-202ENST00000356660 JAMLQ86YT9 394 aa13.51□□□□□ -0.25
BDNF-202ENST00000356660 CEP95Q96GE4 821 aa13.51□□□□□ -0.25
BDNF-202ENST00000356660 TGS1Q96RS0 853 aaKnown RBP13.51□□□□□ -0.25
BDNF-202ENST00000356660 ERP44Q9BS26 406 aa13.51□□□□□ -0.25
BDNF-202ENST00000356660 BHMT2Q9H2M3 363 aa13.51□□□□□ -0.25
BDNF-202ENST00000356660 VPS37BQ9H9H4 285 aa13.51□□□□□ -0.25
BDNF-202ENST00000356660 RGPD8O14715 1765 aaPredicted RBP13.51□□□□□ -0.25
BDNF-202ENST00000356660 ATP2B4P23634 1241 aa13.51□□□□□ -0.25
BDNF-202ENST00000356660 KCNJ2P63252 427 aa13.51□□□□□ -0.25
BDNF-202ENST00000356660 ICA1Q05084 483 aa13.51□□□□□ -0.25
BDNF-202ENST00000356660 DRAP1Q14919 205 aaPredicted RBP13.51□□□□□ -0.25
BDNF-202ENST00000356660 KCNK18Q7Z418 384 aa13.51□□□□□ -0.25
BDNF-202ENST00000356660 IMPG2Q9BZV3 1241 aa13.51□□□□□ -0.25
BDNF-202ENST00000356660 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.51□□□□□ -0.25
BDNF-202ENST00000356660 SH3BP1Q9Y3L3 701 aa13.51□□□□□ -0.25
BDNF-202ENST00000356660 RASSF9O75901 435 aa13.5□□□□□ -0.25
BDNF-202ENST00000356660 TRIM49P0CI25 452 aa13.5□□□□□ -0.25
BDNF-202ENST00000356660 TRIM49CP0CI26 452 aa13.5□□□□□ -0.25
BDNF-202ENST00000356660 CDK8P49336 464 aa13.5□□□□□ -0.25
BDNF-202ENST00000356660 CD302Q8IX05 232 aa13.5□□□□□ -0.25
BDNF-202ENST00000356660 PPM1KQ8N3J5 372 aa13.5□□□□□ -0.25
BDNF-202ENST00000356660 AGAP11Q8TF27 550 aa13.5□□□□□ -0.25
BDNF-202ENST00000356660 KDM4CQ9H3R0 1056 aa13.5□□□□□ -0.25
BDNF-202ENST00000356660 MAD2L2Q9UI95 211 aa13.5□□□□□ -0.25
BDNF-202ENST00000356660 G3BP2Q9UN86 482 aaKnown RBP13.5□□□□□ -0.25
BDNF-202ENST00000356660 TUBGCP6Q96RT7 1819 aa13.5□□□□□ -0.25
BDNF-202ENST00000356660 TMEM120BA0PK00 339 aa13.5□□□□□ -0.25
BDNF-202ENST00000356660 GAS8O95995 478 aa13.5□□□□□ -0.25
BDNF-202ENST00000356660 BCRP11274 1271 aa13.5□□□□□ -0.25
BDNF-202ENST00000356660 SLMAPQ14BN4 828 aa13.5□□□□□ -0.25
BDNF-202ENST00000356660 SGO2Q562F6 1265 aa13.5□□□□□ -0.25
BDNF-202ENST00000356660 BARGINQ6ZT62 677 aa13.5□□□□□ -0.25
BDNF-202ENST00000356660 LONP2Q86WA8 852 aa13.5□□□□□ -0.25
BDNF-202ENST00000356660 C4orf32Q8N8J7 132 aa13.5□□□□□ -0.25
BDNF-202ENST00000356660 VCXQ9H320 206 aa13.5□□□□□ -0.25
BDNF-202ENST00000356660 CYTH3O43739 400 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms