RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 NPM3O75607 178 aaKnown RBP5.92□□□□□ -1.46
PTPRD-202ENST00000356435 KRT37O76014 449 aa5.92□□□□□ -1.46
PTPRD-202ENST00000356435 GFPT2O94808 682 aa5.92□□□□□ -1.46
PTPRD-202ENST00000356435 SLC27A3Q5K4L6 730 aa5.92□□□□□ -1.46
PTPRD-202ENST00000356435 ZNF658Q5TYW1 1059 aaPredicted RBP5.92□□□□□ -1.46
PTPRD-202ENST00000356435 SRLQ86TD4 932 aa5.92□□□□□ -1.46
PTPRD-202ENST00000356435 ULK4Q96C45 1275 aa5.92□□□□□ -1.46
PTPRD-202ENST00000356435 RBM41Q96IZ5 413 aaKnown RBP5.92□□□□□ -1.46
PTPRD-202ENST00000356435 VIPAS39Q9H9C1 493 aa5.92□□□□□ -1.46
PTPRD-202ENST00000356435 FGFR1OP2Q9NVK5 253 aa5.92□□□□□ -1.46
PTPRD-202ENST00000356435 DNAJC17Q9NVM6 304 aaKnown RBP5.92□□□□□ -1.46
PTPRD-202ENST00000356435 RWDD2AQ9UIY3 292 aa5.92□□□□□ -1.46
PTPRD-202ENST00000356435 L3MBTL1Q9Y468 752 aa5.92□□□□□ -1.46
PTPRD-202ENST00000356435 SRPRBQ9Y5M8 271 aaKnown RBP5.92□□□□□ -1.46
PTPRD-202ENST00000356435 TULP4Q9NRJ4 1543 aa5.91□□□□□ -1.46
PTPRD-202ENST00000356435 MEIS1O00470 390 aa5.91□□□□□ -1.46
PTPRD-202ENST00000356435 EIF3DO15371 548 aaKnown RBP eCLIP5.91□□□□□ -1.46
PTPRD-202ENST00000356435 PRELPP51888 382 aa5.91□□□□□ -1.46
PTPRD-202ENST00000356435 ST8SIA6P61647 398 aa5.91□□□□□ -1.46
PTPRD-202ENST00000356435 KRT76Q01546 638 aa5.91□□□□□ -1.46
PTPRD-202ENST00000356435 CACNB1Q02641 598 aaPredicted RBP5.91□□□□□ -1.46
PTPRD-202ENST00000356435 CAPRIN1Q14444 709 aaKnown RBP5.91□□□□□ -1.46
PTPRD-202ENST00000356435 RBBP7Q16576 425 aa5.91□□□□□ -1.46
PTPRD-202ENST00000356435 CDO1Q16878 200 aa5.91□□□□□ -1.46
PTPRD-202ENST00000356435 EFHC2Q5JST6 749 aa5.91□□□□□ -1.46
PTPRD-202ENST00000356435 STX19Q8N4C7 294 aa5.91□□□□□ -1.46
PTPRD-202ENST00000356435 GTF3C2Q8WUA4 911 aaPredicted RBP5.91□□□□□ -1.46
PTPRD-202ENST00000356435 MAGOHBQ96A72 148 aaKnown RBP5.91□□□□□ -1.46
PTPRD-202ENST00000356435 FAF2Q96CS3 445 aa5.91□□□□□ -1.46
PTPRD-202ENST00000356435 PBKQ96KB5 322 aa5.91□□□□□ -1.46
PTPRD-202ENST00000356435 PARK7Q99497 189 aaKnown RBP5.91□□□□□ -1.46
PTPRD-202ENST00000356435 TRIM54Q9BYV2 358 aa5.91□□□□□ -1.46
PTPRD-202ENST00000356435 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.91□□□□□ -1.46
PTPRD-202ENST00000356435 GOLGA8MH3BSY2 632 aa5.91□□□□□ -1.46
PTPRD-202ENST00000356435 K7ERI5 159 aa5.91□□□□□ -1.46
PTPRD-202ENST00000356435 PPP6R2O75170 966 aa5.91□□□□□ -1.46
PTPRD-202ENST00000356435 TADA3O75528 432 aa5.91□□□□□ -1.46
PTPRD-202ENST00000356435 FGAP02671 866 aa5.91□□□□□ -1.46
PTPRD-202ENST00000356435 HOXA13P31271 388 aaPredicted RBP5.91□□□□□ -1.46
PTPRD-202ENST00000356435 EPHB4P54760 987 aa5.91□□□□□ -1.46
PTPRD-202ENST00000356435 CCZ1BP86790 482 aa5.91□□□□□ -1.46
PTPRD-202ENST00000356435 CCZ1P86791 482 aaPredicted RBP5.91□□□□□ -1.46
PTPRD-202ENST00000356435 ZNF827Q17R98 1081 aa5.91□□□□□ -1.46
PTPRD-202ENST00000356435 ZNF568Q3ZCX4 644 aa5.91□□□□□ -1.46
PTPRD-202ENST00000356435 FAM133AQ8N9E0 248 aa5.91□□□□□ -1.46
PTPRD-202ENST00000356435 SPATA33Q96N06 139 aa5.91□□□□□ -1.46
PTPRD-202ENST00000356435 EGFL8Q99944 293 aa5.91□□□□□ -1.46
PTPRD-202ENST00000356435 ANGPTL2Q9UKU9 493 aa5.91□□□□□ -1.46
PTPRD-202ENST00000356435 PCDHA7Q9UN72 937 aa5.91□□□□□ -1.46
PTPRD-202ENST00000356435 DEPDC5O75140 1603 aa5.91□□□□□ -1.46
PTPRD-202ENST00000356435 M0QYV0 167 aa5.91□□□□□ -1.46
PTPRD-202ENST00000356435 PRPF3O43395 683 aaKnown RBP5.91□□□□□ -1.46
PTPRD-202ENST00000356435 RPS6KA5O75582 802 aa5.91□□□□□ -1.46
PTPRD-202ENST00000356435 PLA2G4BP0C869 781 aa5.91□□□□□ -1.46
PTPRD-202ENST00000356435 CTTNQ14247 550 aaKnown RBP5.91□□□□□ -1.46
PTPRD-202ENST00000356435 ZMYM1Q5SVZ6 1142 aa5.91□□□□□ -1.46
PTPRD-202ENST00000356435 TRMT10CQ7L0Y3 403 aaKnown RBP5.91□□□□□ -1.46
PTPRD-202ENST00000356435 OR9Q1Q8NGQ5 310 aa5.91□□□□□ -1.46
PTPRD-202ENST00000356435 FBXO41Q8TF61 875 aa5.91□□□□□ -1.46
PTPRD-202ENST00000356435 CHCHD3Q9NX63 227 aaKnown RBP5.91□□□□□ -1.46
PTPRD-202ENST00000356435 KPNA7A9QM74 516 aa5.91□□□□□ -1.46
PTPRD-202ENST00000356435 TRAPPC3O43617 180 aa5.91□□□□□ -1.46
PTPRD-202ENST00000356435 EEF1B2P24534 225 aaKnown RBP5.91□□□□□ -1.46
PTPRD-202ENST00000356435 ARL4CP56559 192 aa5.91□□□□□ -1.46
PTPRD-202ENST00000356435 CYP4F22Q6NT55 531 aa5.91□□□□□ -1.46
PTPRD-202ENST00000356435 ABHD8Q96I13 439 aa5.91□□□□□ -1.46
PTPRD-202ENST00000356435 TRIM4Q9C037 500 aa5.91□□□□□ -1.46
PTPRD-202ENST00000356435 BTBD18B2RXH4 712 aa5.91□□□□□ -1.46
PTPRD-202ENST00000356435 ZNF263O14978 683 aa5.91□□□□□ -1.46
PTPRD-202ENST00000356435 CLIC2O15247 247 aa5.91□□□□□ -1.46
PTPRD-202ENST00000356435 COBLO75128 1261 aa5.91□□□□□ -1.46
PTPRD-202ENST00000356435 ALDH1A1P00352 501 aa5.91□□□□□ -1.46
PTPRD-202ENST00000356435 SF3A3Q12874 501 aaKnown RBP eCLIP5.91□□□□□ -1.46
PTPRD-202ENST00000356435 MAPK6Q16659 721 aa5.91□□□□□ -1.46
PTPRD-202ENST00000356435 ARHGEF25Q86VW2 580 aa5.91□□□□□ -1.46
PTPRD-202ENST00000356435 RASEFQ8IZ41 740 aa5.91□□□□□ -1.46
PTPRD-202ENST00000356435 PPP1R13BQ96KQ4 1090 aa5.91□□□□□ -1.46
PTPRD-202ENST00000356435 KDM4CQ9H3R0 1056 aa5.91□□□□□ -1.46
PTPRD-202ENST00000356435 SEL1LQ9UBV2 794 aa5.91□□□□□ -1.46
PTPRD-202ENST00000356435 ZBTB1Q9Y2K1 713 aa5.91□□□□□ -1.46
PTPRD-202ENST00000356435 DIS3Q9Y2L1 958 aaKnown RBP5.91□□□□□ -1.46
PTPRD-202ENST00000356435 TNPO2O14787 897 aaKnown RBP5.91□□□□□ -1.46
PTPRD-202ENST00000356435 TJP3O95049 919 aa5.91□□□□□ -1.46
PTPRD-202ENST00000356435 DR1Q01658 176 aa5.91□□□□□ -1.46
PTPRD-202ENST00000356435 DEUP1Q05D60 604 aa5.91□□□□□ -1.46
PTPRD-202ENST00000356435 HABP4Q5JVS0 413 aaKnown RBP5.91□□□□□ -1.46
PTPRD-202ENST00000356435 FAM83BQ5T0W9 1011 aa5.91□□□□□ -1.46
PTPRD-202ENST00000356435 NAA35Q5VZE5 725 aa5.91□□□□□ -1.46
PTPRD-202ENST00000356435 SDE2Q6IQ49 451 aa5.91□□□□□ -1.46
PTPRD-202ENST00000356435 THNSL1Q8IYQ7 743 aa5.91□□□□□ -1.46
PTPRD-202ENST00000356435 DCUN1D1Q96GG9 259 aa5.91□□□□□ -1.46
PTPRD-202ENST00000356435 SYTL2Q9HCH5 934 aa5.91□□□□□ -1.46
PTPRD-202ENST00000356435 MRPL40Q9NQ50 206 aaKnown RBP5.91□□□□□ -1.46
PTPRD-202ENST00000356435 ATG3Q9NT62 314 aa5.91□□□□□ -1.46
PTPRD-202ENST00000356435 INTS9Q9NV88 658 aaKnown RBP5.91□□□□□ -1.46
PTPRD-202ENST00000356435 DNAJC5BQ9UF47 199 aa5.91□□□□□ -1.46
PTPRD-202ENST00000356435 DOLKQ9UPQ8 538 aa5.91□□□□□ -1.46
PTPRD-202ENST00000356435 GDAQ9Y2T3 454 aa5.91□□□□□ -1.46
PTPRD-202ENST00000356435 ADRA2BP18089 450 aa5.91□□□□□ -1.46
PTPRD-202ENST00000356435 TBXAS1P24557 533 aaPredicted RBP5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms