RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 NEK9Q8TD19 979 aa10.99□□□□□ -0.65
PTPRA-203ENST00000356147 NSMCE1Q8WV22 266 aa10.99□□□□□ -0.65
PTPRA-203ENST00000356147 CUL5Q93034 780 aa10.99□□□□□ -0.65
PTPRA-203ENST00000356147 SLC35C1Q96A29 364 aa10.99□□□□□ -0.65
PTPRA-203ENST00000356147 ELMO3Q96BJ8 720 aa10.99□□□□□ -0.65
PTPRA-203ENST00000356147 TLCD1Q96CP7 247 aa10.99□□□□□ -0.65
PTPRA-203ENST00000356147 HES6Q96HZ4 224 aa10.99□□□□□ -0.65
PTPRA-203ENST00000356147 ERP44Q9BS26 406 aa10.99□□□□□ -0.65
PTPRA-203ENST00000356147 RUSC1Q9BVN2 902 aa10.99□□□□□ -0.65
PTPRA-203ENST00000356147 ACP6Q9NPH0 428 aa10.99□□□□□ -0.65
PTPRA-203ENST00000356147 SUCLA2Q9P2R7 463 aaPredicted RBP10.99□□□□□ -0.65
PTPRA-203ENST00000356147 GGA2Q9UJY4 613 aa10.99□□□□□ -0.65
PTPRA-203ENST00000356147 COG5Q9UP83 839 aa10.99□□□□□ -0.65
PTPRA-203ENST00000356147 PHLPP1O60346 1717 aa10.99□□□□□ -0.65
PTPRA-203ENST00000356147 ESYT2A0FGR8 921 aa10.98□□□□□ -0.65
PTPRA-203ENST00000356147 UBOX5O94941 541 aa10.98□□□□□ -0.65
PTPRA-203ENST00000356147 CYP2J2P51589 502 aa10.98□□□□□ -0.65
PTPRA-203ENST00000356147 SLC12A3P55017 1021 aa10.98□□□□□ -0.65
PTPRA-203ENST00000356147 DRAP1Q14919 205 aaPredicted RBP10.98□□□□□ -0.65
PTPRA-203ENST00000356147 FAM182BQ5T319 152 aa10.98□□□□□ -0.65
PTPRA-203ENST00000356147 SEPT14Q6ZU15 432 aa10.98□□□□□ -0.65
PTPRA-203ENST00000356147 TRMT1LQ7Z2T5 733 aaKnown RBP10.98□□□□□ -0.65
PTPRA-203ENST00000356147 ZDHHC14Q8IZN3 488 aa10.98□□□□□ -0.65
PTPRA-203ENST00000356147 ATXN2LQ8WWM7 1075 aaKnown RBP10.98□□□□□ -0.65
PTPRA-203ENST00000356147 BTBD6Q96KE9 485 aa10.98□□□□□ -0.65
PTPRA-203ENST00000356147 P2RX7Q99572 595 aaKnown RBP10.98□□□□□ -0.65
PTPRA-203ENST00000356147 SLITRK6Q9H5Y7 841 aa10.98□□□□□ -0.65
PTPRA-203ENST00000356147 FAM114A2Q9NRY5 505 aa10.98□□□□□ -0.65
PTPRA-203ENST00000356147 DDX3YO15523 660 aaKnown RBP10.98□□□□□ -0.65
PTPRA-203ENST00000356147 STAT1P42224 750 aa10.98□□□□□ -0.65
PTPRA-203ENST00000356147 RPL21P46778 160 aaKnown RBP10.98□□□□□ -0.65
PTPRA-203ENST00000356147 TNIP1Q15025 636 aa10.98□□□□□ -0.65
PTPRA-203ENST00000356147 LONRF1Q17RB8 773 aa10.98□□□□□ -0.65
PTPRA-203ENST00000356147 USH1GQ495M9 461 aa10.98□□□□□ -0.65
PTPRA-203ENST00000356147 TBC1D10BQ4KMP7 808 aaPredicted RBP10.98□□□□□ -0.65
PTPRA-203ENST00000356147 MFSD14BQ5SR56 506 aa10.98□□□□□ -0.65
PTPRA-203ENST00000356147 ZDHHC24Q6UX98 284 aa10.98□□□□□ -0.65
PTPRA-203ENST00000356147 RPAINQ86UA6 219 aa10.98□□□□□ -0.65
PTPRA-203ENST00000356147 RASGEF1CQ8N431 466 aa10.98□□□□□ -0.65
PTPRA-203ENST00000356147 GDAP1Q8TB36 358 aa10.98□□□□□ -0.65
PTPRA-203ENST00000356147 SLC20A1Q8WUM9 679 aa10.98□□□□□ -0.65
PTPRA-203ENST00000356147 DYDC1Q8WWB3 177 aa10.98□□□□□ -0.65
PTPRA-203ENST00000356147 CTNNBL1Q8WYA6 563 aaPredicted RBP10.98□□□□□ -0.65
PTPRA-203ENST00000356147 ZNF287Q9HBT7 754 aa10.98□□□□□ -0.65
PTPRA-203ENST00000356147 ZDHHC18Q9NUE0 388 aa10.98□□□□□ -0.65
PTPRA-203ENST00000356147 CTNNAL1Q9UBT7 734 aa10.98□□□□□ -0.65
PTPRA-203ENST00000356147 DNAJC12Q9UKB3 198 aa10.98□□□□□ -0.65
PTPRA-203ENST00000356147 ROBO3Q96MS0 1386 aa10.98□□□□□ -0.65
PTPRA-203ENST00000356147 CHMP2AO43633 222 aa10.98□□□□□ -0.65
PTPRA-203ENST00000356147 PPFIA2O75334 1257 aa10.98□□□□□ -0.65
PTPRA-203ENST00000356147 ACSL3O95573 720 aa10.98□□□□□ -0.65
PTPRA-203ENST00000356147 PAEPP09466 180 aa10.98□□□□□ -0.65
PTPRA-203ENST00000356147 TM4SF1P30408 202 aa10.98□□□□□ -0.65
PTPRA-203ENST00000356147 MARSP56192 900 aaKnown RBP10.98□□□□□ -0.65
PTPRA-203ENST00000356147 SLFN11Q7Z7L1 901 aa10.98□□□□□ -0.65
PTPRA-203ENST00000356147 SPICE1Q8N0Z3 855 aa10.98□□□□□ -0.65
PTPRA-203ENST00000356147 ANKS4BQ8N8V4 417 aa10.98□□□□□ -0.65
PTPRA-203ENST00000356147 MXD3Q9BW11 206 aa10.98□□□□□ -0.65
PTPRA-203ENST00000356147 NT5C3AQ9H0P0 336 aa10.98□□□□□ -0.65
PTPRA-203ENST00000356147 USP40Q9NVE5 1235 aa10.98□□□□□ -0.65
PTPRA-203ENST00000356147 FGFR1OP2Q9NVK5 253 aa10.98□□□□□ -0.65
PTPRA-203ENST00000356147 SAMD15Q9P1V8 674 aa10.98□□□□□ -0.65
PTPRA-203ENST00000356147 PNMA3Q9UL41 463 aa10.98□□□□□ -0.65
PTPRA-203ENST00000356147 ASTN1O14525 1302 aa10.97□□□□□ -0.65
PTPRA-203ENST00000356147 PNMA6FA0A0J9YX94 578 aa10.97□□□□□ -0.65
PTPRA-203ENST00000356147 MGRN1O60291 552 aa10.97□□□□□ -0.65
PTPRA-203ENST00000356147 MRPL12P52815 198 aaKnown RBP10.97□□□□□ -0.65
PTPRA-203ENST00000356147 GSTO1P78417 241 aa10.97□□□□□ -0.65
PTPRA-203ENST00000356147 KLRC3Q07444 240 aa10.97□□□□□ -0.65
PTPRA-203ENST00000356147 CBWD6Q4V339 395 aa10.97□□□□□ -0.65
PTPRA-203ENST00000356147 CBWD3Q5JTY5 395 aa10.97□□□□□ -0.65
PTPRA-203ENST00000356147 KIAA1755Q5JYT7 1200 aa10.97□□□□□ -0.65
PTPRA-203ENST00000356147 CBWD5Q5RIA9 395 aa10.97□□□□□ -0.65
PTPRA-203ENST00000356147 DUPD1Q68J44 220 aa10.97□□□□□ -0.65
PTPRA-203ENST00000356147 TTC27Q6P3X3 843 aa10.97□□□□□ -0.65
PTPRA-203ENST00000356147 AGAP11Q8TF27 550 aa10.97□□□□□ -0.65
PTPRA-203ENST00000356147 LMBR1Q8WVP7 490 aa10.97□□□□□ -0.65
PTPRA-203ENST00000356147 DDX23Q9BUQ8 820 aaKnown RBP10.97□□□□□ -0.65
PTPRA-203ENST00000356147 PABPC3Q9H361 631 aaKnown RBP10.97□□□□□ -0.65
PTPRA-203ENST00000356147 SWAP70Q9UH65 585 aa10.97□□□□□ -0.65
PTPRA-203ENST00000356147 RPTORQ8N122 1335 aa10.97□□□□□ -0.65
PTPRA-203ENST00000356147 KIAA0391O15091 583 aaKnown RBP10.97□□□□□ -0.65
PTPRA-203ENST00000356147 GNPATO15228 680 aa10.97□□□□□ -0.65
PTPRA-203ENST00000356147 UFL1O94874 794 aa10.97□□□□□ -0.65
PTPRA-203ENST00000356147 RHBDL3P58872 404 aa10.97□□□□□ -0.65
PTPRA-203ENST00000356147 PTENP60484 403 aa10.97□□□□□ -0.65
PTPRA-203ENST00000356147 PPP4CP60510 307 aa10.97□□□□□ -0.65
PTPRA-203ENST00000356147 MESDQ14696 234 aa10.97□□□□□ -0.65
PTPRA-203ENST00000356147 LACTB2Q53H82 288 aaPredicted RBP10.97□□□□□ -0.65
PTPRA-203ENST00000356147 CLEC4GQ6UXB4 293 aa10.97□□□□□ -0.65
PTPRA-203ENST00000356147 TRPM8Q7Z2W7 1104 aa10.97□□□□□ -0.65
PTPRA-203ENST00000356147 HOOK3Q86VS8 718 aa10.97□□□□□ -0.65
PTPRA-203ENST00000356147 KCNV2Q8TDN2 545 aa10.97□□□□□ -0.65
PTPRA-203ENST00000356147 RAB17Q9H0T7 212 aa10.97□□□□□ -0.65
PTPRA-203ENST00000356147 KDM4CQ9H3R0 1056 aa10.97□□□□□ -0.65
PTPRA-203ENST00000356147 TCP11X1B4DZS4 312 aa10.96□□□□□ -0.65
PTPRA-203ENST00000356147 CES2O00748 559 aa10.96□□□□□ -0.65
PTPRA-203ENST00000356147 C21orf2O43822 256 aa10.96□□□□□ -0.65
PTPRA-203ENST00000356147 ANP32DO95626 131 aa10.96□□□□□ -0.65
PTPRA-203ENST00000356147 LDHCP07864 332 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms