RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 GOLPH3LQ9H4A5 285 aa17.25■□□□□ 0.35
TRIM13-201ENST00000356017 KBTBD4Q9NVX7 518 aa17.25■□□□□ 0.35
TRIM13-201ENST00000356017 KCNG1Q9UIX4 513 aa17.25■□□□□ 0.35
TRIM13-201ENST00000356017 RSPH10B2B2RC85 870 aa17.24■□□□□ 0.35
TRIM13-201ENST00000356017 ZNF202O95125 648 aa17.24■□□□□ 0.35
TRIM13-201ENST00000356017 KRT18P05783 430 aaKnown RBP17.24■□□□□ 0.35
TRIM13-201ENST00000356017 RSPH10BP0C881 870 aa17.24■□□□□ 0.35
TRIM13-201ENST00000356017 ARL2P36404 184 aa17.24■□□□□ 0.35
TRIM13-201ENST00000356017 FAM160A1Q05DH4 1040 aa17.24■□□□□ 0.35
TRIM13-201ENST00000356017 DRP2Q13474 957 aa17.24■□□□□ 0.35
TRIM13-201ENST00000356017 FAM26DQ5JW98 314 aa17.24■□□□□ 0.35
TRIM13-201ENST00000356017 ZNF618Q5T7W0 954 aa17.24■□□□□ 0.35
TRIM13-201ENST00000356017 FAM102BQ5T8I3 360 aa17.24■□□□□ 0.35
TRIM13-201ENST00000356017 LRRC8DQ7L1W4 858 aa17.24■□□□□ 0.35
TRIM13-201ENST00000356017 MAEAQ7L5Y9 396 aa17.24■□□□□ 0.35
TRIM13-201ENST00000356017 RHPN2Q8IUC4 686 aa17.24■□□□□ 0.35
TRIM13-201ENST00000356017 PRPF31Q8WWY3 499 aaKnown RBP17.24■□□□□ 0.35
TRIM13-201ENST00000356017 C17orf75Q9HAS0 396 aa17.24■□□□□ 0.35
TRIM13-201ENST00000356017 ODF2LQ9ULJ1 636 aa17.24■□□□□ 0.35
TRIM13-201ENST00000356017 COL4A3BPQ9Y5P4 624 aa17.24■□□□□ 0.35
TRIM13-201ENST00000356017 LOXHD1Q8IVV2 1947 aa17.24■□□□□ 0.35
TRIM13-201ENST00000356017 GADD45BO75293 160 aaPredicted RBP17.23■□□□□ 0.35
TRIM13-201ENST00000356017 VTNP04004 478 aa17.23■□□□□ 0.35
TRIM13-201ENST00000356017 IQCF3P0C7M6 154 aa17.23■□□□□ 0.35
TRIM13-201ENST00000356017 MLLT1Q03111 559 aaPredicted RBP17.23■□□□□ 0.35
TRIM13-201ENST00000356017 TFDP1Q14186 410 aa17.23■□□□□ 0.35
TRIM13-201ENST00000356017 ARSHQ5FYA8 562 aa17.23■□□□□ 0.35
TRIM13-201ENST00000356017 KANK3Q6NY19 840 aa17.23■□□□□ 0.35
TRIM13-201ENST00000356017 ZNF410Q86VK4 478 aa17.23■□□□□ 0.35
TRIM13-201ENST00000356017 TMEM199Q8N511 208 aa17.23■□□□□ 0.35
TRIM13-201ENST00000356017 CELF4Q9BZC1 486 aaKnown RBP17.23■□□□□ 0.35
TRIM13-201ENST00000356017 POLR3FQ9H1D9 316 aaPredicted RBP17.23■□□□□ 0.35
TRIM13-201ENST00000356017 TRPV2Q9Y5S1 764 aa17.23■□□□□ 0.35
TRIM13-201ENST00000356017 CTSHP09668 335 aa17.22■□□□□ 0.35
TRIM13-201ENST00000356017 CYP2C18P33260 490 aa17.22■□□□□ 0.35
TRIM13-201ENST00000356017 NLRP11P59045 1033 aaKnown RBP17.22■□□□□ 0.35
TRIM13-201ENST00000356017 POU5F1BQ06416 359 aa17.22■□□□□ 0.35
TRIM13-201ENST00000356017 TMEM62Q0P6H9 643 aa17.22■□□□□ 0.35
TRIM13-201ENST00000356017 LAMTOR4Q0VGL1 99 aa17.22■□□□□ 0.35
TRIM13-201ENST00000356017 PPP2R5AQ15172 486 aa17.22■□□□□ 0.35
TRIM13-201ENST00000356017 LONRF3Q496Y0 759 aa17.22■□□□□ 0.35
TRIM13-201ENST00000356017 MFSD5Q6N075 450 aa17.22■□□□□ 0.35
TRIM13-201ENST00000356017 FMR1NBQ8N0W7 255 aaPredicted RBP17.22■□□□□ 0.35
TRIM13-201ENST00000356017 CNNM3Q8NE01 707 aa17.22■□□□□ 0.35
TRIM13-201ENST00000356017 ENGASEQ8NFI3 743 aa17.22■□□□□ 0.35
TRIM13-201ENST00000356017 DDX12PQ92771 950 aa17.22■□□□□ 0.35
TRIM13-201ENST00000356017 IFT74Q96LB3 600 aa17.22■□□□□ 0.35
TRIM13-201ENST00000356017 SCLT1Q96NL6 688 aa17.22■□□□□ 0.35
TRIM13-201ENST00000356017 GPRC5CQ9NQ84 441 aa17.22■□□□□ 0.35
TRIM13-201ENST00000356017 SERTAD1Q9UHV2 236 aa17.22■□□□□ 0.35
TRIM13-201ENST00000356017 CDY2AQ9Y6F7 541 aa17.22■□□□□ 0.35
TRIM13-201ENST00000356017 SQORQ9Y6N5 450 aa17.22■□□□□ 0.35
TRIM13-201ENST00000356017 ACTN4O43707 911 aaKnown RBP17.21■□□□□ 0.35
TRIM13-201ENST00000356017 HIP1RO75146 1068 aa17.21■□□□□ 0.35
TRIM13-201ENST00000356017 GPR32O75388 356 aa17.21■□□□□ 0.35
TRIM13-201ENST00000356017 CHRNA1P02708 482 aa17.21■□□□□ 0.35
TRIM13-201ENST00000356017 MYL1P05976 194 aa17.21■□□□□ 0.35
TRIM13-201ENST00000356017 RFC2P35250 354 aa17.21■□□□□ 0.35
TRIM13-201ENST00000356017 GPC3P51654 580 aa17.21■□□□□ 0.35
TRIM13-201ENST00000356017 CRYBB1P53674 252 aaPredicted RBP17.21■□□□□ 0.35
TRIM13-201ENST00000356017 CCL23P55773 120 aa17.21■□□□□ 0.35
TRIM13-201ENST00000356017 MGAT3Q09327 533 aa17.21■□□□□ 0.35
TRIM13-201ENST00000356017 KIZQ2M2Z5 673 aa17.21■□□□□ 0.35
TRIM13-201ENST00000356017 KRBA2Q6ZNG9 492 aa17.21■□□□□ 0.35
TRIM13-201ENST00000356017 USP38Q8NB14 1042 aa17.21■□□□□ 0.35
TRIM13-201ENST00000356017 NLRP7Q8WX94 980 aa17.21■□□□□ 0.35
TRIM13-201ENST00000356017 REEP2Q9BRK0 252 aa17.21■□□□□ 0.35
TRIM13-201ENST00000356017 LARSQ9P2J5 1176 aaKnown RBP17.21■□□□□ 0.35
TRIM13-201ENST00000356017 GINS2Q9Y248 185 aa17.21■□□□□ 0.35
TRIM13-201ENST00000356017 TRIP12Q14669 1992 aaPredicted RBP17.21■□□□□ 0.35
TRIM13-201ENST00000356017 MYMKA6NI61 221 aa17.21■□□□□ 0.35
TRIM13-201ENST00000356017 TBCAO75347 108 aaKnown RBP17.21■□□□□ 0.35
TRIM13-201ENST00000356017 SYN1P17600 705 aa17.21■□□□□ 0.35
TRIM13-201ENST00000356017 RAD51AP2Q09MP3 1159 aa17.21■□□□□ 0.35
TRIM13-201ENST00000356017 SNW1Q13573 536 aaKnown RBP17.21■□□□□ 0.35
TRIM13-201ENST00000356017 GIT2Q14161 759 aa17.21■□□□□ 0.35
TRIM13-201ENST00000356017 UMODL1Q5DID0 1318 aa17.21■□□□□ 0.35
TRIM13-201ENST00000356017 ARID2Q68CP9 1835 aa17.21■□□□□ 0.35
TRIM13-201ENST00000356017 TRAF7Q6Q0C0 670 aa17.21■□□□□ 0.35
TRIM13-201ENST00000356017 NLRP4Q96MN2 994 aa17.21■□□□□ 0.35
TRIM13-201ENST00000356017 TIGD1Q96MW7 591 aa17.21■□□□□ 0.35
TRIM13-201ENST00000356017 LBHD1Q9BQE6 289 aaPredicted RBP17.21■□□□□ 0.35
TRIM13-201ENST00000356017 INO80BQ9C086 356 aaPredicted RBP17.21■□□□□ 0.35
TRIM13-201ENST00000356017 WNT8AQ9H1J5 351 aa17.21■□□□□ 0.35
TRIM13-201ENST00000356017 ADAMTS10Q9H324 1103 aa17.21■□□□□ 0.35
TRIM13-201ENST00000356017 LMBRD1Q9NUN5 540 aa17.21■□□□□ 0.35
TRIM13-201ENST00000356017 ZMYND8Q9ULU4 1186 aaPredicted RBP17.21■□□□□ 0.35
TRIM13-201ENST00000356017 KINO60870 393 aaKnown RBP17.2■□□□□ 0.34
TRIM13-201ENST00000356017 SRGAP2CP0DJJ0 459 aa17.2■□□□□ 0.34
TRIM13-201ENST00000356017 GLRA2P23416 452 aa17.2■□□□□ 0.34
TRIM13-201ENST00000356017 ITGB8P26012 769 aa17.2■□□□□ 0.34
TRIM13-201ENST00000356017 NAMPTP43490 491 aa17.2■□□□□ 0.34
TRIM13-201ENST00000356017 DMP1Q13316 513 aaPredicted RBP17.2■□□□□ 0.34
TRIM13-201ENST00000356017 ODR4Q5SWX8 454 aa17.2■□□□□ 0.34
TRIM13-201ENST00000356017 CNNM4Q6P4Q7 775 aa17.2■□□□□ 0.34
TRIM13-201ENST00000356017 FAM43BQ6ZT52 329 aaPredicted RBP17.2■□□□□ 0.34
TRIM13-201ENST00000356017 DYMQ7RTS9 669 aa17.2■□□□□ 0.34
TRIM13-201ENST00000356017 DAW1Q8N136 415 aa17.2■□□□□ 0.34
TRIM13-201ENST00000356017 RNF149Q8NC42 400 aa17.2■□□□□ 0.34
TRIM13-201ENST00000356017 PAGE5Q96GU1 130 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms