RNA–Protein interactions for RNA: ENST00000355983.3

CCR9-201, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,653 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-201ENST00000355983 SRBD1Q8N5C6 995 aaKnown RBP8.3□□□□□ -1.08
CCR9-201ENST00000355983 SCG3Q8WXD2 468 aaKnown RBP8.3□□□□□ -1.08
CCR9-201ENST00000355983 DDX27Q96GQ7 796 aaKnown RBP8.3□□□□□ -1.08
CCR9-201ENST00000355983 SETDB2Q96T68 719 aa8.3□□□□□ -1.08
CCR9-201ENST00000355983 ZNF184Q99676 751 aaPredicted RBP8.3□□□□□ -1.08
CCR9-201ENST00000355983 DDX23Q9BUQ8 820 aaKnown RBP8.3□□□□□ -1.08
CCR9-201ENST00000355983 BRD8Q9H0E9 1235 aa8.3□□□□□ -1.08
CCR9-201ENST00000355983 PUS7LQ9H0K6 701 aaKnown RBP8.3□□□□□ -1.08
CCR9-201ENST00000355983 ASCC2Q9H1I8 757 aaPredicted RBP8.3□□□□□ -1.08
CCR9-201ENST00000355983 BHMT2Q9H2M3 363 aa8.3□□□□□ -1.08
CCR9-201ENST00000355983 TIMMDC1Q9NPL8 285 aa8.3□□□□□ -1.08
CCR9-201ENST00000355983 SPATA7Q9P0W8 599 aa8.3□□□□□ -1.08
CCR9-201ENST00000355983 HSFX1Q9UBD0 423 aa8.3□□□□□ -1.08
CCR9-201ENST00000355983 TRIM33Q9UPN9 1127 aa8.3□□□□□ -1.08
CCR9-201ENST00000355983 CD2APQ9Y5K6 639 aa8.3□□□□□ -1.08
CCR9-201ENST00000355983 NR2E3Q9Y5X4 410 aa8.3□□□□□ -1.08
CCR9-201ENST00000355983 RTL9Q8NET4 1388 aa8.3□□□□□ -1.08
CCR9-201ENST00000355983 RASGRF2O14827 1237 aa8.3□□□□□ -1.08
CCR9-201ENST00000355983 RXRAP19793 462 aa8.3□□□□□ -1.08
CCR9-201ENST00000355983 SMARCA1P28370 1054 aa8.3□□□□□ -1.08
CCR9-201ENST00000355983 RGS2P41220 211 aa8.3□□□□□ -1.08
CCR9-201ENST00000355983 HPCAP84074 193 aa8.3□□□□□ -1.08
CCR9-201ENST00000355983 RNASELQ05823 741 aaKnown RBP8.3□□□□□ -1.08
CCR9-201ENST00000355983 ANKRD40Q6AI12 368 aa8.3□□□□□ -1.08
CCR9-201ENST00000355983 LRRC74BQ6ZQY2 392 aa8.3□□□□□ -1.08
CCR9-201ENST00000355983 C4orf50Q6ZRC1 276 aa8.3□□□□□ -1.08
CCR9-201ENST00000355983 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.3□□□□□ -1.08
CCR9-201ENST00000355983 PIP4K2CQ8TBX8 421 aa8.3□□□□□ -1.08
CCR9-201ENST00000355983 ZNF398Q8TD17 642 aa8.3□□□□□ -1.08
CCR9-201ENST00000355983 DIS3LQ8TF46 1054 aaKnown RBP8.3□□□□□ -1.08
CCR9-201ENST00000355983 NAT14Q8WUY8 206 aa8.3□□□□□ -1.08
CCR9-201ENST00000355983 PUS3Q9BZE2 481 aaKnown RBP8.3□□□□□ -1.08
CCR9-201ENST00000355983 DENND2DQ9H6A0 471 aaPredicted RBP8.3□□□□□ -1.08
CCR9-201ENST00000355983 RASAL2Q9UJF2 1139 aa8.3□□□□□ -1.08
CCR9-201ENST00000355983 STK24Q9Y6E0 443 aa8.3□□□□□ -1.08
CCR9-201ENST00000355983 CCDC88AQ3V6T2 1871 aa8.3□□□□□ -1.08
CCR9-201ENST00000355983 UMODL1Q5DID0 1318 aa8.3□□□□□ -1.08
CCR9-201ENST00000355983 KIF1AQ12756 1690 aa8.29□□□□□ -1.08
CCR9-201ENST00000355983 EPHB6O15197 1021 aa8.29□□□□□ -1.08
CCR9-201ENST00000355983 TTI1O43156 1089 aa8.29□□□□□ -1.08
CCR9-201ENST00000355983 MAP3K7O43318 606 aa8.29□□□□□ -1.08
CCR9-201ENST00000355983 GNA14O95837 355 aa8.29□□□□□ -1.08
CCR9-201ENST00000355983 RARGP13631 454 aa8.29□□□□□ -1.08
CCR9-201ENST00000355983 HSPA6P17066 643 aa8.29□□□□□ -1.08
CCR9-201ENST00000355983 ADD2P35612 726 aa8.29□□□□□ -1.08
CCR9-201ENST00000355983 GPSM2P81274 684 aa8.29□□□□□ -1.08
CCR9-201ENST00000355983 FOXO4P98177 505 aa8.29□□□□□ -1.08
CCR9-201ENST00000355983 NAALADL2Q58DX5 795 aa8.29□□□□□ -1.08
CCR9-201ENST00000355983 CGB2Q6NT52 195 aa8.29□□□□□ -1.08
CCR9-201ENST00000355983 CCDC174Q6PII3 467 aa8.29□□□□□ -1.08
CCR9-201ENST00000355983 C3orf62Q6ZUJ4 267 aa8.29□□□□□ -1.08
CCR9-201ENST00000355983 TRMT10CQ7L0Y3 403 aaKnown RBP8.29□□□□□ -1.08
CCR9-201ENST00000355983 MAEAQ7L5Y9 396 aa8.29□□□□□ -1.08
CCR9-201ENST00000355983 TXNDC2Q86VQ3 553 aa8.29□□□□□ -1.08
CCR9-201ENST00000355983 PASD1Q8IV76 773 aa8.29□□□□□ -1.08
CCR9-201ENST00000355983 METTL13Q8N6R0 699 aa8.29□□□□□ -1.08
CCR9-201ENST00000355983 ANKRD13CQ8N6S4 541 aa8.29□□□□□ -1.08
CCR9-201ENST00000355983 FANCBQ8NB91 859 aa8.29□□□□□ -1.08
CCR9-201ENST00000355983 SUPT20HQ8NEM7 779 aa8.29□□□□□ -1.08
CCR9-201ENST00000355983 STAMQ92783 540 aa8.29□□□□□ -1.08
CCR9-201ENST00000355983 MYD88Q99836 296 aa8.29□□□□□ -1.08
CCR9-201ENST00000355983 C7orf25Q9BPX7 421 aa8.29□□□□□ -1.08
CCR9-201ENST00000355983 DDX47Q9H0S4 455 aaKnown RBP8.29□□□□□ -1.08
CCR9-201ENST00000355983 TMEM165Q9HC07 324 aa8.29□□□□□ -1.08
CCR9-201ENST00000355983 LRRC4CQ9HCJ2 640 aa8.29□□□□□ -1.08
CCR9-201ENST00000355983 NUB1Q9Y5A7 615 aa8.29□□□□□ -1.08
CCR9-201ENST00000355983 A8MXQ7 604 aa8.29□□□□□ -1.08
CCR9-201ENST00000355983 UBE2Q2LH0YL09 131 aa8.29□□□□□ -1.08
CCR9-201ENST00000355983 SLC18A1P54219 525 aa8.29□□□□□ -1.08
CCR9-201ENST00000355983 LRRC63Q05C16 580 aa8.29□□□□□ -1.08
CCR9-201ENST00000355983 HNRNPDQ14103 355 aaKnown RBP8.29□□□□□ -1.08
CCR9-201ENST00000355983 PKN1Q16512 942 aa8.29□□□□□ -1.08
CCR9-201ENST00000355983 VSTM1Q6UX27 236 aa8.29□□□□□ -1.08
CCR9-201ENST00000355983 PPP1R21Q6ZMI0 780 aa8.29□□□□□ -1.08
CCR9-201ENST00000355983 ARHGEF18Q6ZSZ5 1173 aa8.29□□□□□ -1.08
CCR9-201ENST00000355983 NCCRP1Q6ZVX7 275 aaPredicted RBP8.29□□□□□ -1.08
CCR9-201ENST00000355983 VSIG1Q86XK7 387 aa8.29□□□□□ -1.08
CCR9-201ENST00000355983 CCNJLQ8IV13 435 aa8.29□□□□□ -1.08
CCR9-201ENST00000355983 ST13P4Q8IZP2 240 aaPredicted RBP8.29□□□□□ -1.08
CCR9-201ENST00000355983 C4orf32Q8N8J7 132 aa8.29□□□□□ -1.08
CCR9-201ENST00000355983 WDR60Q8WVS4 1066 aa8.29□□□□□ -1.08
CCR9-201ENST00000355983 HES6Q96HZ4 224 aa8.29□□□□□ -1.08
CCR9-201ENST00000355983 TUBGCP5Q96RT8 1024 aa8.29□□□□□ -1.08
CCR9-201ENST00000355983 MYLK2Q9H1R3 596 aa8.29□□□□□ -1.08
CCR9-201ENST00000355983 UNC45AQ9H3U1 944 aa8.29□□□□□ -1.08
CCR9-201ENST00000355983 SYNCQ9H7C4 482 aa8.29□□□□□ -1.08
CCR9-201ENST00000355983 TUBA8Q9NY65 449 aaPredicted RBP8.29□□□□□ -1.08
CCR9-201ENST00000355983 MTRF1LQ9UGC7 380 aaKnown RBP8.29□□□□□ -1.08
CCR9-201ENST00000355983 AMACRQ9UHK6 382 aa8.29□□□□□ -1.08
CCR9-201ENST00000355983 TMEM98Q9Y2Y6 226 aa8.29□□□□□ -1.08
CCR9-201ENST00000355983 RPTORQ8N122 1335 aa8.29□□□□□ -1.08
CCR9-201ENST00000355983 ADAMTS13Q76LX8 1427 aa8.29□□□□□ -1.08
CCR9-201ENST00000355983 A0A0J9YVX5 310 aa8.28□□□□□ -1.08
CCR9-201ENST00000355983 LAD1O00515 517 aa8.28□□□□□ -1.08
CCR9-201ENST00000355983 PODXLO00592 558 aa8.28□□□□□ -1.08
CCR9-201ENST00000355983 RGL2O15211 777 aa8.28□□□□□ -1.08
CCR9-201ENST00000355983 ZWINTO95229 277 aa8.28□□□□□ -1.08
CCR9-201ENST00000355983 CYP1A1P04798 512 aaPredicted RBP8.28□□□□□ -1.08
CCR9-201ENST00000355983 VAV1P15498 845 aa8.28□□□□□ -1.08
CCR9-201ENST00000355983 TIMM10P62072 90 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms