RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 YWHAGP61981 247 aaKnown RBP eCLIP8.54□□□□□ -1.04
HTT-201ENST00000355072 MTA1Q13330 715 aa8.54□□□□□ -1.04
HTT-201ENST00000355072 MGARPQ8TDB4 240 aa8.54□□□□□ -1.04
HTT-201ENST00000355072 EPAS1Q99814 870 aa8.54□□□□□ -1.04
HTT-201ENST00000355072 TIPINQ9BVW5 301 aa8.54□□□□□ -1.04
HTT-201ENST00000355072 RAD21L1Q9H4I0 556 aa8.54□□□□□ -1.04
HTT-201ENST00000355072 FAM47DPA6NHR8 397 aa8.54□□□□□ -1.04
HTT-201ENST00000355072 ZBTB7BO15156 539 aaPredicted RBP8.54□□□□□ -1.04
HTT-201ENST00000355072 MFAP3LO75121 409 aa8.54□□□□□ -1.04
HTT-201ENST00000355072 CNTFP26441 200 aa8.54□□□□□ -1.04
HTT-201ENST00000355072 ARMCX2Q7L311 632 aa8.54□□□□□ -1.04
HTT-201ENST00000355072 DNAJC9Q8WXX5 260 aa8.54□□□□□ -1.04
HTT-201ENST00000355072 TSPAN17Q96FV3 270 aa8.54□□□□□ -1.04
HTT-201ENST00000355072 AHCYL1O43865 530 aa8.54□□□□□ -1.04
HTT-201ENST00000355072 TMPRSS15P98073 1019 aa8.54□□□□□ -1.04
HTT-201ENST00000355072 KCTD16Q68DU8 428 aa8.54□□□□□ -1.04
HTT-201ENST00000355072 GPBP1Q86WP2 473 aa8.54□□□□□ -1.04
HTT-201ENST00000355072 GPT2Q8TD30 523 aa8.54□□□□□ -1.04
HTT-201ENST00000355072 CALB2P22676 271 aa8.54□□□□□ -1.04
HTT-201ENST00000355072 GJC1P36383 396 aa8.54□□□□□ -1.04
HTT-201ENST00000355072 MDH1P40925 334 aaKnown RBP8.54□□□□□ -1.04
HTT-201ENST00000355072 PHACTR3Q96KR7 559 aa8.54□□□□□ -1.04
HTT-201ENST00000355072 XPO6Q96QU8 1125 aaKnown RBP8.54□□□□□ -1.04
HTT-201ENST00000355072 PRR23BQ6ZRT6 265 aa8.54□□□□□ -1.04
HTT-201ENST00000355072 BLIDQ8IZY5 108 aa8.54□□□□□ -1.04
HTT-201ENST00000355072 SYN2Q92777 582 aaPredicted RBP8.54□□□□□ -1.04
HTT-201ENST00000355072 EYA2O00167 538 aa8.54□□□□□ -1.04
HTT-201ENST00000355072 GGCXP38435 758 aa8.54□□□□□ -1.04
HTT-201ENST00000355072 NAALADL2Q58DX5 795 aa8.54□□□□□ -1.04
HTT-201ENST00000355072 RTL3Q8N8U3 475 aaKnown RBP8.54□□□□□ -1.04
HTT-201ENST00000355072 PCDHA12Q9UN75 941 aa8.54□□□□□ -1.04
HTT-201ENST00000355072 AP3M1Q9Y2T2 418 aa8.54□□□□□ -1.04
HTT-201ENST00000355072 PTPRKQ15262 1439 aa8.54□□□□□ -1.04
HTT-201ENST00000355072 MAP1BP46821 2468 aaKnown RBP8.54□□□□□ -1.04
HTT-201ENST00000355072 SLC35F6Q8N357 371 aa8.54□□□□□ -1.04
HTT-201ENST00000355072 S100ZQ8WXG8 99 aa8.54□□□□□ -1.04
HTT-201ENST00000355072 OTULINQ96BN8 352 aa8.54□□□□□ -1.04
HTT-201ENST00000355072 MYO18AQ92614 2054 aaKnown RBP8.54□□□□□ -1.04
HTT-201ENST00000355072 RNF103-CHMP3A0A140T963 221 aa8.53□□□□□ -1.04
HTT-201ENST00000355072 PDAP1Q13442 181 aaKnown RBP8.53□□□□□ -1.04
HTT-201ENST00000355072 ANKRD42Q8N9B4 389 aa8.53□□□□□ -1.04
HTT-201ENST00000355072 INTUQ9ULD6 942 aa8.53□□□□□ -1.04
HTT-201ENST00000355072 COPEO14579 308 aa8.53□□□□□ -1.04
HTT-201ENST00000355072 MMP1P03956 469 aa8.53□□□□□ -1.04
HTT-201ENST00000355072 PIK3CAP42336 1068 aa8.53□□□□□ -1.04
HTT-201ENST00000355072 LMO7Q8WWI1 1683 aa8.53□□□□□ -1.04
HTT-201ENST00000355072 MECOMQ03112 1051 aa8.53□□□□□ -1.04
HTT-201ENST00000355072 KRT40Q6A162 431 aa8.53□□□□□ -1.04
HTT-201ENST00000355072 SIX6OS1Q8N1H7 587 aa8.53□□□□□ -1.04
HTT-201ENST00000355072 ADPGKQ9BRR6 497 aa8.53□□□□□ -1.04
HTT-201ENST00000355072 PDS5AQ29RF7 1337 aaKnown RBP8.53□□□□□ -1.04
HTT-201ENST00000355072 E2F4Q16254 413 aa8.53□□□□□ -1.04
HTT-201ENST00000355072 RAPH1Q70E73 1250 aa8.53□□□□□ -1.04
HTT-201ENST00000355072 NDUFAF2Q8N183 169 aa8.53□□□□□ -1.04
HTT-201ENST00000355072 TK2O00142 265 aa8.53□□□□□ -1.04
HTT-201ENST00000355072 PLTPP55058 493 aa8.53□□□□□ -1.04
HTT-201ENST00000355072 TTC8Q8TAM2 541 aa8.53□□□□□ -1.04
HTT-201ENST00000355072 DLG3Q92796 817 aa8.53□□□□□ -1.04
HTT-201ENST00000355072 PCDHA7Q9UN72 937 aa8.53□□□□□ -1.04
HTT-201ENST00000355072 ITIH2P19823 946 aa8.53□□□□□ -1.04
HTT-201ENST00000355072 ATN1P54259 1190 aaPredicted RBP8.53□□□□□ -1.04
HTT-201ENST00000355072 SNX17Q15036 470 aa8.53□□□□□ -1.04
HTT-201ENST00000355072 ASPRV1Q53RT3 343 aa8.53□□□□□ -1.04
HTT-201ENST00000355072 FAM45BPQ6NSW5 357 aa8.53□□□□□ -1.04
HTT-201ENST00000355072 PIK3AP1Q6ZUJ8 805 aa8.53□□□□□ -1.04
HTT-201ENST00000355072 NLRP14Q86W24 1093 aa8.53□□□□□ -1.04
HTT-201ENST00000355072 MAGEB6Q8N7X4 407 aa8.53□□□□□ -1.04
HTT-201ENST00000355072 GIMAP8Q8ND71 665 aaPredicted RBP8.53□□□□□ -1.04
HTT-201ENST00000355072 A0A1W2PP64 1363 aa8.53□□□□□ -1.04
HTT-201ENST00000355072 TCP11X2Q5H9J9 407 aa8.53□□□□□ -1.04
HTT-201ENST00000355072 TOGARAM2Q6ZUX3 1019 aa8.53□□□□□ -1.04
HTT-201ENST00000355072 METTL22Q9BUU2 404 aaPredicted RBP8.53□□□□□ -1.04
HTT-201ENST00000355072 PSMD14O00487 310 aa8.53□□□□□ -1.04
HTT-201ENST00000355072 ZBTB24O43167 697 aaPredicted RBP8.53□□□□□ -1.04
HTT-201ENST00000355072 CIAO1O76071 339 aa8.53□□□□□ -1.04
HTT-201ENST00000355072 YARSP54577 528 aaKnown RBP8.53□□□□□ -1.04
HTT-201ENST00000355072 ADAM9Q13443 819 aa8.53□□□□□ -1.04
HTT-201ENST00000355072 C11orf88Q6PI97 169 aa8.53□□□□□ -1.04
HTT-201ENST00000355072 ELMSAN1Q6PJG2 1045 aa8.53□□□□□ -1.04
HTT-201ENST00000355072 VPS37AQ8NEZ2 397 aa8.53□□□□□ -1.04
HTT-201ENST00000355072 DEPDC1BQ8WUY9 529 aa8.53□□□□□ -1.04
HTT-201ENST00000355072 DACH2Q96NX9 599 aa8.53□□□□□ -1.04
HTT-201ENST00000355072 SH3GL1Q99961 368 aa8.53□□□□□ -1.04
HTT-201ENST00000355072 CAPN9O14815 690 aa8.53□□□□□ -1.04
HTT-201ENST00000355072 NPR1P16066 1061 aa8.53□□□□□ -1.04
HTT-201ENST00000355072 EHHADHQ08426 723 aa8.53□□□□□ -1.04
HTT-201ENST00000355072 LONRF3Q496Y0 759 aa8.53□□□□□ -1.04
HTT-201ENST00000355072 TPTE2Q6XPS3 522 aa8.53□□□□□ -1.04
HTT-201ENST00000355072 MICALL2Q8IY33 904 aa8.53□□□□□ -1.04
HTT-201ENST00000355072 KLHL31Q9H511 634 aa8.53□□□□□ -1.04
HTT-201ENST00000355072 MTO1Q9Y2Z2 717 aaKnown RBP8.53□□□□□ -1.04
HTT-201ENST00000355072 TNNI1P19237 187 aa8.53□□□□□ -1.04
HTT-201ENST00000355072 ADSLP30566 484 aaPredicted RBP8.53□□□□□ -1.04
HTT-201ENST00000355072 ATICP31939 592 aa8.53□□□□□ -1.04
HTT-201ENST00000355072 PEX5P50542 639 aa8.53□□□□□ -1.04
HTT-201ENST00000355072 CCZ1BP86790 482 aa8.53□□□□□ -1.04
HTT-201ENST00000355072 CCZ1P86791 482 aaPredicted RBP8.53□□□□□ -1.04
HTT-201ENST00000355072 TNNI3KQ59H18 835 aa8.53□□□□□ -1.04
HTT-201ENST00000355072 SPATA21Q7Z572 469 aa8.53□□□□□ -1.04
HTT-201ENST00000355072 PALB2Q86YC2 1186 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms