RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 EPN1Q9Y6I3 576 aaPredicted RBP11.74□□□□□ -0.53
SND1-201ENST00000354725 BAZ2BQ9UIF8 2168 aaKnown RBP11.74□□□□□ -0.53
SND1-201ENST00000354725 CEP104O60308 925 aa11.74□□□□□ -0.53
SND1-201ENST00000354725 MYCP01106 439 aaPredicted RBP11.74□□□□□ -0.53
SND1-201ENST00000354725 MYBL1P10243 752 aa11.74□□□□□ -0.53
SND1-201ENST00000354725 HARSP12081 509 aaKnown RBP11.74□□□□□ -0.53
SND1-201ENST00000354725 ENPP1P22413 925 aa11.74□□□□□ -0.53
SND1-201ENST00000354725 CCT6AP40227 531 aaKnown RBP11.74□□□□□ -0.53
SND1-201ENST00000354725 EPS15P42566 896 aa11.74□□□□□ -0.53
SND1-201ENST00000354725 CCDC38Q502W7 563 aa11.74□□□□□ -0.53
SND1-201ENST00000354725 TAF1DQ9H5J8 278 aaPredicted RBP11.74□□□□□ -0.53
SND1-201ENST00000354725 SSC5DA1L4H1 1573 aa11.74□□□□□ -0.53
SND1-201ENST00000354725 PHIPQ8WWQ0 1821 aa11.74□□□□□ -0.53
SND1-201ENST00000354725 CTAGE15A4D2H0 777 aa11.74□□□□□ -0.53
SND1-201ENST00000354725 EIF3FO00303 357 aaPredicted RBP11.74□□□□□ -0.53
SND1-201ENST00000354725 RHOXF2BP0C7M4 288 aa11.74□□□□□ -0.53
SND1-201ENST00000354725 CTAGE8P0CG41 777 aa11.74□□□□□ -0.53
SND1-201ENST00000354725 KLHL10Q6JEL2 608 aa11.74□□□□□ -0.53
SND1-201ENST00000354725 CTAGE6Q86UF2 777 aa11.74□□□□□ -0.53
SND1-201ENST00000354725 CTAGE4Q8IX94 777 aa11.74□□□□□ -0.53
SND1-201ENST00000354725 NDUFAF2Q8N183 169 aa11.74□□□□□ -0.53
SND1-201ENST00000354725 RPGRIP1Q96KN7 1286 aa11.74□□□□□ -0.53
SND1-201ENST00000354725 RHOXF2Q9BQY4 288 aa11.74□□□□□ -0.53
SND1-201ENST00000354725 IER2Q9BTL4 223 aa11.74□□□□□ -0.53
SND1-201ENST00000354725 BLZF1Q9H2G9 400 aa11.74□□□□□ -0.53
SND1-201ENST00000354725 DMGDHQ9UI17 866 aaKnown RBP11.74□□□□□ -0.53
SND1-201ENST00000354725 GDAQ9Y2T3 454 aa11.74□□□□□ -0.53
SND1-201ENST00000354725 CYP2D7A0A087X1C5 515 aa11.73□□□□□ -0.53
SND1-201ENST00000354725 ANO9A1A5B4 782 aa11.73□□□□□ -0.53
SND1-201ENST00000354725 ATP6V1G2O95670 118 aa11.73□□□□□ -0.53
SND1-201ENST00000354725 VDRP11473 427 aa11.73□□□□□ -0.53
SND1-201ENST00000354725 GGCXP38435 758 aa11.73□□□□□ -0.53
SND1-201ENST00000354725 MIIPQ5JXC2 388 aa11.73□□□□□ -0.53
SND1-201ENST00000354725 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.73□□□□□ -0.536e-8■■■□□ 17.3
SND1-201ENST00000354725 DCP1AQ9NPI6 582 aaPredicted RBP11.73□□□□□ -0.53
SND1-201ENST00000354725 KMT5AQ9NQR1 393 aa11.73□□□□□ -0.53
SND1-201ENST00000354725 GGA2Q9UJY4 613 aa11.73□□□□□ -0.53
SND1-201ENST00000354725 SERPINA10Q9UK55 444 aa11.73□□□□□ -0.53
SND1-201ENST00000354725 C2CD2Q9Y426 696 aa11.73□□□□□ -0.53
SND1-201ENST00000354725 THSD7BQ9C0I4 1608 aa11.73□□□□□ -0.53
SND1-201ENST00000354725 A6NNZ2 444 aa11.73□□□□□ -0.53
SND1-201ENST00000354725 OPLAHO14841 1288 aa11.73□□□□□ -0.53
SND1-201ENST00000354725 N4BP3O15049 544 aa11.73□□□□□ -0.53
SND1-201ENST00000354725 PRDX5P30044 214 aa11.73□□□□□ -0.53
SND1-201ENST00000354725 KRT9P35527 623 aa11.73□□□□□ -0.53
SND1-201ENST00000354725 HALP42357 657 aa11.73□□□□□ -0.53
SND1-201ENST00000354725 DYNLL1P63167 89 aaKnown RBP11.73□□□□□ -0.53
SND1-201ENST00000354725 TUBB8Q3ZCM7 444 aa11.73□□□□□ -0.53
SND1-201ENST00000354725 RRAGBQ5VZM2 374 aa11.73□□□□□ -0.53
SND1-201ENST00000354725 TYW1BQ6NUM6 668 aa11.73□□□□□ -0.53
SND1-201ENST00000354725 WDR66Q8TBY9 1149 aa11.73□□□□□ -0.53
SND1-201ENST00000354725 TRPM4Q8TD43 1214 aa11.73□□□□□ -0.53
SND1-201ENST00000354725 MAGEF1Q9HAY2 307 aa11.73□□□□□ -0.53
SND1-201ENST00000354725 COMMD8Q9NX08 183 aa11.73□□□□□ -0.53
SND1-201ENST00000354725 TAB2Q9NYJ8 693 aa11.73□□□□□ -0.53
SND1-201ENST00000354725 LRP2BPQ9P2M1 347 aa11.73□□□□□ -0.53
SND1-201ENST00000354725 COL2A1P02458 1487 aaPredicted RBP11.73□□□□□ -0.53
SND1-201ENST00000354725 RCCD1A6NED2 376 aa11.73□□□□□ -0.53
SND1-201ENST00000354725 LAD1O00515 517 aa11.73□□□□□ -0.53
SND1-201ENST00000354725 CNGA1P29973 690 aa11.73□□□□□ -0.53
SND1-201ENST00000354725 CRELD2Q6UXH1 353 aaPredicted RBP11.73□□□□□ -0.53
SND1-201ENST00000354725 CPLX3Q8WVH0 158 aa11.73□□□□□ -0.53
SND1-201ENST00000354725 JAKMIP2Q96AA8 810 aa11.73□□□□□ -0.53
SND1-201ENST00000354725 NMRK2Q9NPI5 230 aa11.73□□□□□ -0.53
SND1-201ENST00000354725 CHST12Q9NRB3 414 aa11.73□□□□□ -0.53
SND1-201ENST00000354725 TCP11L1Q9NUJ3 509 aa11.73□□□□□ -0.53
SND1-201ENST00000354725 TRIM10Q9UDY6 481 aa11.73□□□□□ -0.53
SND1-201ENST00000354725 PCDHA4Q9UN74 947 aa11.73□□□□□ -0.53
SND1-201ENST00000354725 hCG_1642624A0A1W2PR95 340 aa11.72□□□□□ -0.53
SND1-201ENST00000354725 DCAF8L1A6NGE4 600 aa11.72□□□□□ -0.53
SND1-201ENST00000354725 ALOX15P16050 662 aaPredicted RBP11.72□□□□□ -0.53
SND1-201ENST00000354725 MKRN4PQ13434 485 aaPredicted RBP11.72□□□□□ -0.53
SND1-201ENST00000354725 STIM1Q13586 685 aa11.72□□□□□ -0.53
SND1-201ENST00000354725 APOBEC3HQ6NTF7 200 aaKnown RBP11.72□□□□□ -0.53
SND1-201ENST00000354725 FOXR2Q6PJQ5 311 aa11.72□□□□□ -0.53
SND1-201ENST00000354725 NOC3LQ8WTT2 800 aaKnown RBP11.72□□□□□ -0.53
SND1-201ENST00000354725 CEP295NLQ96MC4 621 aa11.72□□□□□ -0.53
SND1-201ENST00000354725 ERGIC2Q96RQ1 377 aa11.72□□□□□ -0.53
SND1-201ENST00000354725 IL17RBQ9NRM6 502 aa11.72□□□□□ -0.53
SND1-201ENST00000354725 ATP8A2Q9NTI2 1148 aa11.72□□□□□ -0.53
SND1-201ENST00000354725 L3MBTL1Q9Y468 752 aa11.72□□□□□ -0.53
SND1-201ENST00000354725 AGPSO00116 658 aa11.72□□□□□ -0.53
SND1-201ENST00000354725 ALDH3A1P30838 453 aa11.72□□□□□ -0.53
SND1-201ENST00000354725 NOVP48745 357 aa11.72□□□□□ -0.53
SND1-201ENST00000354725 MFSD14BQ5SR56 506 aa11.72□□□□□ -0.53
SND1-201ENST00000354725 NCAPH2Q6IBW4 605 aa11.72□□□□□ -0.53
SND1-201ENST00000354725 PIK3AP1Q6ZUJ8 805 aa11.72□□□□□ -0.53
SND1-201ENST00000354725 VPS52Q8N1B4 723 aa11.72□□□□□ -0.53
SND1-201ENST00000354725 KIAA1958Q8N8K9 716 aa11.72□□□□□ -0.53
SND1-201ENST00000354725 ZDHHC15Q96MV8 337 aa11.72□□□□□ -0.53
SND1-201ENST00000354725 VPS16Q9H269 839 aa11.72□□□□□ -0.53
SND1-201ENST00000354725 CUEDC2Q9H467 287 aa11.72□□□□□ -0.53
SND1-201ENST00000354725 SLC5A4Q9NY91 659 aa11.72□□□□□ -0.53
SND1-201ENST00000354725 CNOT7Q9UIV1 285 aaKnown RBP11.72□□□□□ -0.53
SND1-201ENST00000354725 GPR75-ASB3A0A0A6YYF3 556 aa11.72□□□□□ -0.53
SND1-201ENST00000354725 DPPA5A6NC42 116 aa11.72□□□□□ -0.53
SND1-201ENST00000354725 NMT2O60551 498 aa11.72□□□□□ -0.53
SND1-201ENST00000354725 UPP2O95045 317 aa11.72□□□□□ -0.53
SND1-201ENST00000354725 ATP1A1P05023 1023 aaKnown RBP11.72□□□□□ -0.53
SND1-201ENST00000354725 HDAC4P56524 1084 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms