RNA–Protein interactions for RNA: ENST00000350498.7

PDAP1-201, Transcript of PDGFA associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDAP1, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-201ENST00000350498 ZNF536O15090 1300 aa18.09■□□□□ 0.49
PDAP1-201ENST00000350498 GOLGA8KD6RF30 607 aa18.09■□□□□ 0.49
PDAP1-201ENST00000350498 DDX3XO00571 662 aaKnown RBP eCLIP18.09■□□□□ 0.497e-14■■■■□ 20.9
PDAP1-201ENST00000350498 KCNK3O14649 394 aa18.09■□□□□ 0.49
PDAP1-201ENST00000350498 CAP2P40123 477 aa18.09■□□□□ 0.49
PDAP1-201ENST00000350498 PALB2Q86YC2 1186 aa18.09■□□□□ 0.49
PDAP1-201ENST00000350498 OGFOD1Q8N543 542 aa18.09■□□□□ 0.49
PDAP1-201ENST00000350498 OR2W6PQ8NHA6 318 aa18.09■□□□□ 0.49
PDAP1-201ENST00000350498 CAVIN3Q969G5 261 aa18.09■□□□□ 0.49
PDAP1-201ENST00000350498 INPP4AQ96PE3 977 aaPredicted RBP18.09■□□□□ 0.49
PDAP1-201ENST00000350498 ZNF341Q9BYN7 854 aa18.09■□□□□ 0.49
PDAP1-201ENST00000350498 PARVGQ9HBI0 331 aa18.09■□□□□ 0.49
PDAP1-201ENST00000350498 ASTN2O75129 1339 aaPredicted RBP18.09■□□□□ 0.49
PDAP1-201ENST00000350498 DPEP1P16444 411 aa18.08■□□□□ 0.49
PDAP1-201ENST00000350498 SPP2Q13103 211 aa18.08■□□□□ 0.49
PDAP1-201ENST00000350498 GBP6Q6ZN66 633 aa18.08■□□□□ 0.49
PDAP1-201ENST00000350498 FAM178BQ8IXR5 827 aa18.08■□□□□ 0.49
PDAP1-201ENST00000350498 IQCKQ8N0W5 287 aa18.08■□□□□ 0.49
PDAP1-201ENST00000350498 U2AF1L4Q8WU68 220 aaKnown RBP18.08■□□□□ 0.49
PDAP1-201ENST00000350498 KAT2BQ92831 832 aa18.08■□□□□ 0.49
PDAP1-201ENST00000350498 NUCKS1Q9H1E3 243 aaKnown RBP18.08■□□□□ 0.49
PDAP1-201ENST00000350498 PLCB1Q9NQ66 1216 aa18.08■□□□□ 0.49
PDAP1-201ENST00000350498 OLFML3Q9NRN5 406 aa18.08■□□□□ 0.49
PDAP1-201ENST00000350498 PCDHGC5Q9Y5F6 944 aa18.08■□□□□ 0.49
PDAP1-201ENST00000350498 HIP1RO75146 1068 aa18.08■□□□□ 0.48
PDAP1-201ENST00000350498 KCNA3P22001 575 aa18.08■□□□□ 0.48
PDAP1-201ENST00000350498 JAM2P57087 298 aa18.08■□□□□ 0.48
PDAP1-201ENST00000350498 MAPK7Q13164 816 aa18.08■□□□□ 0.48
PDAP1-201ENST00000350498 LNX1Q8TBB1 728 aaPredicted RBP18.08■□□□□ 0.48
PDAP1-201ENST00000350498 HOOK2Q96ED9 719 aa18.08■□□□□ 0.48
PDAP1-201ENST00000350498 OSGEPQ9NPF4 335 aa18.08■□□□□ 0.48
PDAP1-201ENST00000350498 OPA1O60313 960 aa18.07■□□□□ 0.48
PDAP1-201ENST00000350498 ARHGAP44Q17R89 818 aa18.07■□□□□ 0.48
PDAP1-201ENST00000350498 CFAP58Q5T655 872 aa18.07■□□□□ 0.48
PDAP1-201ENST00000350498 GLYCTKQ8IVS8 523 aa18.07■□□□□ 0.48
PDAP1-201ENST00000350498 IFT20Q8IY31 132 aa18.07■□□□□ 0.48
PDAP1-201ENST00000350498 CENPHQ9H3R5 247 aa18.07■□□□□ 0.48
PDAP1-201ENST00000350498 RAVER2Q9HCJ3 691 aaKnown RBP18.07■□□□□ 0.48
PDAP1-201ENST00000350498 TUFT1Q9NNX1 390 aa18.07■□□□□ 0.48
PDAP1-201ENST00000350498 AGPAT3Q9NRZ7 376 aa18.07■□□□□ 0.48
PDAP1-201ENST00000350498 KCNH7Q9NS40 1196 aa18.07■□□□□ 0.48
PDAP1-201ENST00000350498 CHORDC1Q9UHD1 332 aaPredicted RBP18.07■□□□□ 0.48
PDAP1-201ENST00000350498 CCPG1Q9ULG6 757 aa18.07■□□□□ 0.48
PDAP1-201ENST00000350498 EVI5O60447 810 aa18.07■□□□□ 0.48
PDAP1-201ENST00000350498 SEC24CP53992 1094 aa18.07■□□□□ 0.48
PDAP1-201ENST00000350498 ITGB3BPQ13352 177 aaPredicted RBP18.07■□□□□ 0.48
PDAP1-201ENST00000350498 GPRC5CQ9NQ84 441 aa18.07■□□□□ 0.48
PDAP1-201ENST00000350498 TAS2R14Q9NYV8 317 aa18.07■□□□□ 0.48
PDAP1-201ENST00000350498 MYH11P35749 1972 aa18.07■□□□□ 0.48
PDAP1-201ENST00000350498 IGSF9BQ9UPX0 1349 aa18.07■□□□□ 0.48
PDAP1-201ENST00000350498 EBAG9O00559 213 aa18.06■□□□□ 0.48
PDAP1-201ENST00000350498 WNT10BO00744 389 aa18.06■□□□□ 0.48
PDAP1-201ENST00000350498 TADA2BQ86TJ2 420 aa18.06■□□□□ 0.48
PDAP1-201ENST00000350498 TTLL6Q8N841 843 aa18.06■□□□□ 0.48
PDAP1-201ENST00000350498 CHURC1Q8WUH1 139 aa18.06■□□□□ 0.48
PDAP1-201ENST00000350498 WNK4Q96J92 1243 aa18.06■□□□□ 0.48
PDAP1-201ENST00000350498 GPR88Q9GZN0 384 aa18.06■□□□□ 0.48
PDAP1-201ENST00000350498 TELO2Q9Y4R8 837 aa18.06■□□□□ 0.48
PDAP1-201ENST00000350498 ALAS1P13196 640 aa18.06■□□□□ 0.48
PDAP1-201ENST00000350498 ABCB4P21439 1286 aa18.06■□□□□ 0.48
PDAP1-201ENST00000350498 RPL13P26373 211 aaKnown RBP18.06■□□□□ 0.48
PDAP1-201ENST00000350498 FMO5P49326 533 aa18.06■□□□□ 0.48
PDAP1-201ENST00000350498 ERVK-9P63128 1117 aa18.06■□□□□ 0.48
PDAP1-201ENST00000350498 FBXW10Q5XX13 1052 aa18.06■□□□□ 0.48
PDAP1-201ENST00000350498 ALS2CLQ60I27 953 aa18.06■□□□□ 0.48
PDAP1-201ENST00000350498 FAM84AQ96KN4 292 aa18.06■□□□□ 0.48
PDAP1-201ENST00000350498 NEUROG2Q9H2A3 272 aa18.06■□□□□ 0.48
PDAP1-201ENST00000350498 PGAP2Q9UHJ9 254 aa18.06■□□□□ 0.48
PDAP1-201ENST00000350498 MRPL11Q9Y3B7 192 aaKnown RBP18.06■□□□□ 0.48
PDAP1-201ENST00000350498 PSMC2P35998 433 aaKnown RBP18.05■□□□□ 0.48
PDAP1-201ENST00000350498 MRPS9P82933 396 aaKnown RBP18.05■□□□□ 0.48
PDAP1-201ENST00000350498 DRAP1Q14919 205 aaPredicted RBP18.05■□□□□ 0.48
PDAP1-201ENST00000350498 UGCGQ16739 394 aa18.05■□□□□ 0.48
PDAP1-201ENST00000350498 MCTP2Q6DN12 878 aa18.05■□□□□ 0.48
PDAP1-201ENST00000350498 B3GNT9Q6UX72 402 aa18.05■□□□□ 0.48
PDAP1-201ENST00000350498 USP38Q8NB14 1042 aa18.05■□□□□ 0.48
PDAP1-201ENST00000350498 MXRA8Q9BRK3 442 aa18.05■□□□□ 0.48
PDAP1-201ENST00000350498 FAM107BQ9H098 131 aa18.05■□□□□ 0.48
PDAP1-201ENST00000350498 LRRC4CQ9HCJ2 640 aa18.05■□□□□ 0.48
PDAP1-201ENST00000350498 DNAJC12Q9UKB3 198 aa18.05■□□□□ 0.48
PDAP1-201ENST00000350498 NDUFAB1O14561 156 aa18.05■□□□□ 0.48
PDAP1-201ENST00000350498 SLC26A4O43511 780 aa18.05■□□□□ 0.48
PDAP1-201ENST00000350498 CEP104O60308 925 aa18.05■□□□□ 0.48
PDAP1-201ENST00000350498 EIF2AK2P19525 551 aaKnown RBP18.05■□□□□ 0.48
PDAP1-201ENST00000350498 HOXA7P31268 230 aaPredicted RBP18.05■□□□□ 0.48
PDAP1-201ENST00000350498 HPDP32754 393 aaPredicted RBP18.05■□□□□ 0.48
PDAP1-201ENST00000350498 FLT3P36888 993 aa18.05■□□□□ 0.48
PDAP1-201ENST00000350498 CXCL9Q07325 125 aa18.05■□□□□ 0.48
PDAP1-201ENST00000350498 HLTFQ14527 1009 aaKnown RBP eCLIP18.05■□□□□ 0.48
PDAP1-201ENST00000350498 PHLDB3Q6NSJ2 640 aa18.05■□□□□ 0.48
PDAP1-201ENST00000350498 LRRC57Q8N9N7 239 aa18.05■□□□□ 0.48
PDAP1-201ENST00000350498 CLEC4DQ8WXI8 215 aa18.05■□□□□ 0.48
PDAP1-201ENST00000350498 PPM1EQ8WY54 764 aa18.05■□□□□ 0.48
PDAP1-201ENST00000350498 NACC1Q96RE7 527 aa18.05■□□□□ 0.48
PDAP1-201ENST00000350498 DDX47Q9H0S4 455 aaKnown RBP18.05■□□□□ 0.48
PDAP1-201ENST00000350498 ACP6Q9NPH0 428 aa18.05■□□□□ 0.48
PDAP1-201ENST00000350498 FRMPD4Q14CM0 1322 aa18.05■□□□□ 0.48
PDAP1-201ENST00000350498 DHX15O43143 795 aaKnown RBP18.04■□□□□ 0.48
PDAP1-201ENST00000350498 SORBS3O60504 671 aa18.04■□□□□ 0.48
PDAP1-201ENST00000350498 ATP9AO75110 1047 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms