RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 KIF4AO95239 1232 aa6.6□□□□□ -1.35
CLCN3-201ENST00000347613 EYA4O95677 639 aa6.6□□□□□ -1.35
CLCN3-201ENST00000347613 TCP1P17987 556 aaKnown RBP6.6□□□□□ -1.35
CLCN3-201ENST00000347613 ABCB4P21439 1286 aa6.6□□□□□ -1.35
CLCN3-201ENST00000347613 KCNA3P22001 575 aa6.6□□□□□ -1.35
CLCN3-201ENST00000347613 PDCLQ13371 301 aa6.6□□□□□ -1.35
CLCN3-201ENST00000347613 ZNF746Q6NUN9 644 aaPredicted RBP6.6□□□□□ -1.35
CLCN3-201ENST00000347613 C8orf74Q6P047 294 aa6.6□□□□□ -1.35
CLCN3-201ENST00000347613 LLGL2Q6P1M3 1020 aa6.6□□□□□ -1.35
CLCN3-201ENST00000347613 FOXR2Q6PJQ5 311 aa6.6□□□□□ -1.35
CLCN3-201ENST00000347613 NT5DC3Q86UY8 548 aa6.6□□□□□ -1.35
CLCN3-201ENST00000347613 SLFN12Q8IYM2 578 aa6.6□□□□□ -1.35
CLCN3-201ENST00000347613 RNF10Q8N5U6 811 aaKnown RBP6.6□□□□□ -1.35
CLCN3-201ENST00000347613 ALG3Q92685 438 aa6.6□□□□□ -1.35
CLCN3-201ENST00000347613 SLC5A5Q92911 643 aa6.6□□□□□ -1.35
CLCN3-201ENST00000347613 PCDHB18PQ96TA0 734 aa6.6□□□□□ -1.35
CLCN3-201ENST00000347613 CBWD1Q9BRT8 395 aa6.6□□□□□ -1.35
CLCN3-201ENST00000347613 THAP2Q9H0W7 228 aa6.6□□□□□ -1.35
CLCN3-201ENST00000347613 DMAC2Q9NW81 257 aa6.6□□□□□ -1.35
CLCN3-201ENST00000347613 SPDYE2BA6NHP3 402 aa6.59□□□□□ -1.35
CLCN3-201ENST00000347613 F8VZ95 297 aa6.59□□□□□ -1.35
CLCN3-201ENST00000347613 PIK3CDO00329 1044 aa6.59□□□□□ -1.35
CLCN3-201ENST00000347613 DDX3YO15523 660 aaKnown RBP6.59□□□□□ -1.35
CLCN3-201ENST00000347613 SORBS3O60504 671 aa6.59□□□□□ -1.35
CLCN3-201ENST00000347613 BUB1BO60566 1050 aaPredicted RBP6.59□□□□□ -1.35
CLCN3-201ENST00000347613 RPS6KA5O75582 802 aa6.59□□□□□ -1.35
CLCN3-201ENST00000347613 SPDYE6P0CI01 402 aa6.59□□□□□ -1.35
CLCN3-201ENST00000347613 XRCC5P13010 732 aaKnown RBP6.59□□□□□ -1.35
CLCN3-201ENST00000347613 PDE6BP35913 854 aa6.59□□□□□ -1.35
CLCN3-201ENST00000347613 SEC24CP53992 1094 aa6.59□□□□□ -1.35
CLCN3-201ENST00000347613 WNT7BP56706 349 aa6.59□□□□□ -1.35
CLCN3-201ENST00000347613 POU5F1Q01860 360 aaKnown RBP6.59□□□□□ -1.35
CLCN3-201ENST00000347613 ITIH3Q06033 890 aa6.59□□□□□ -1.35
CLCN3-201ENST00000347613 AP3B2Q13367 1082 aa6.59□□□□□ -1.35
CLCN3-201ENST00000347613 DRAP1Q14919 205 aaPredicted RBP6.59□□□□□ -1.35
CLCN3-201ENST00000347613 ARHGAP44Q17R89 818 aa6.59□□□□□ -1.35
CLCN3-201ENST00000347613 SPRED3Q2MJR0 410 aa6.59□□□□□ -1.35
CLCN3-201ENST00000347613 LRCH2Q5VUJ6 765 aa6.59□□□□□ -1.35
CLCN3-201ENST00000347613 DAB2IPQ5VWQ8 1189 aa6.59□□□□□ -1.35
CLCN3-201ENST00000347613 SLFN11Q7Z7L1 901 aa6.59□□□□□ -1.35
CLCN3-201ENST00000347613 SLC35G2Q8TBE7 412 aa6.59□□□□□ -1.35
CLCN3-201ENST00000347613 U2AF1L4Q8WU68 220 aaKnown RBP6.59□□□□□ -1.35
CLCN3-201ENST00000347613 GMLQ99445 158 aa6.59□□□□□ -1.35
CLCN3-201ENST00000347613 TRIM51Q9BSJ1 452 aa6.59□□□□□ -1.35
CLCN3-201ENST00000347613 POLR3CQ9BUI4 534 aaPredicted RBP6.59□□□□□ -1.35
CLCN3-201ENST00000347613 MED4Q9NPJ6 270 aa6.59□□□□□ -1.35
CLCN3-201ENST00000347613 PLCB1Q9NQ66 1216 aa6.59□□□□□ -1.35
CLCN3-201ENST00000347613 AGPAT3Q9NRZ7 376 aa6.59□□□□□ -1.35
CLCN3-201ENST00000347613 TYW1Q9NV66 732 aaKnown RBP6.59□□□□□ -1.35
CLCN3-201ENST00000347613 CALCOCO1Q9P1Z2 691 aa6.59□□□□□ -1.35
CLCN3-201ENST00000347613 PSME4Q14997 1843 aa6.59□□□□□ -1.35
CLCN3-201ENST00000347613 TTI1O43156 1089 aa6.59□□□□□ -1.35
CLCN3-201ENST00000347613 EIF3JO75822 258 aaKnown RBP6.59□□□□□ -1.35
CLCN3-201ENST00000347613 PPP1R37O75864 691 aa6.59□□□□□ -1.35
CLCN3-201ENST00000347613 STAT2P52630 851 aa6.59□□□□□ -1.35
CLCN3-201ENST00000347613 RBM26Q5T8P6 1007 aaKnown RBP6.59□□□□□ -1.35
CLCN3-201ENST00000347613 MOXD1Q6UVY6 613 aa6.59□□□□□ -1.35
CLCN3-201ENST00000347613 CLEC4DQ8WXI8 215 aa6.59□□□□□ -1.35
CLCN3-201ENST00000347613 BBXQ8WY36 941 aaPredicted RBP6.59□□□□□ -1.35
CLCN3-201ENST00000347613 KRT35Q92764 455 aa6.59□□□□□ -1.35
CLCN3-201ENST00000347613 CAVIN3Q969G5 261 aa6.59□□□□□ -1.35
CLCN3-201ENST00000347613 EDEM3Q9BZQ6 932 aa6.59□□□□□ -1.35
CLCN3-201ENST00000347613 TMOD4Q9NZQ9 345 aa6.59□□□□□ -1.35
CLCN3-201ENST00000347613 ZNF70Q9UC06 446 aaPredicted RBP6.59□□□□□ -1.35
CLCN3-201ENST00000347613 CNOT8Q9UFF9 292 aaKnown RBP6.59□□□□□ -1.35
CLCN3-201ENST00000347613 ZBTB21Q9ULJ3 1066 aa6.59□□□□□ -1.35
CLCN3-201ENST00000347613 TMX2Q9Y320 296 aa6.59□□□□□ -1.35
CLCN3-201ENST00000347613 RGPD3A6NKT7 1758 aaPredicted RBP6.59□□□□□ -1.35
CLCN3-201ENST00000347613 RGPD4Q7Z3J3 1758 aa6.59□□□□□ -1.35
CLCN3-201ENST00000347613 CCDC66A2RUB6 948 aa6.59□□□□□ -1.35
CLCN3-201ENST00000347613 GOLGA8IPA6NC78 632 aa6.59□□□□□ -1.35
CLCN3-201ENST00000347613 GOLGA6CA6NDK9 693 aa6.59□□□□□ -1.35
CLCN3-201ENST00000347613 GOLGA8JA6NMD2 632 aa6.59□□□□□ -1.35
CLCN3-201ENST00000347613 FOXO6A8MYZ6 492 aa6.59□□□□□ -1.35
CLCN3-201ENST00000347613 CEP104O60308 925 aa6.59□□□□□ -1.35
CLCN3-201ENST00000347613 HIP1RO75146 1068 aa6.59□□□□□ -1.35
CLCN3-201ENST00000347613 VIL1P09327 827 aaKnown RBP6.59□□□□□ -1.35
CLCN3-201ENST00000347613 GOLGA6DP0CG33 693 aa6.59□□□□□ -1.35
CLCN3-201ENST00000347613 PRKCIP41743 596 aa6.59□□□□□ -1.35
CLCN3-201ENST00000347613 NOP2P46087 812 aaKnown RBP6.59□□□□□ -1.35
CLCN3-201ENST00000347613 FMO5P49326 533 aa6.59□□□□□ -1.35
CLCN3-201ENST00000347613 PPATQ06203 517 aa6.59□□□□□ -1.35
CLCN3-201ENST00000347613 PPP2R5CQ13362 524 aa6.59□□□□□ -1.35
CLCN3-201ENST00000347613 CFAP221Q4G0U5 840 aa6.59□□□□□ -1.35
CLCN3-201ENST00000347613 CCDC181Q5TID7 509 aa6.59□□□□□ -1.35
CLCN3-201ENST00000347613 PACS2Q86VP3 889 aa6.59□□□□□ -1.35
CLCN3-201ENST00000347613 ZNF526Q8TF50 670 aaPredicted RBP6.59□□□□□ -1.35
CLCN3-201ENST00000347613 ATP8B4Q8TF62 1192 aa6.59□□□□□ -1.35
CLCN3-201ENST00000347613 SEMA4DQ92854 862 aa6.59□□□□□ -1.35
CLCN3-201ENST00000347613 GLG1Q92896 1179 aa6.59□□□□□ -1.35
CLCN3-201ENST00000347613 RPGRIP1Q96KN7 1286 aa6.59□□□□□ -1.35
CLCN3-201ENST00000347613 ALS2CR12Q96Q35 445 aa6.59□□□□□ -1.35
CLCN3-201ENST00000347613 LXNQ9BS40 222 aa6.59□□□□□ -1.35
CLCN3-201ENST00000347613 MRIQ9BWK5 157 aa6.59□□□□□ -1.35
CLCN3-201ENST00000347613 RANBP17Q9H2T7 1088 aaKnown RBP6.59□□□□□ -1.35
CLCN3-201ENST00000347613 EPB41L4BQ9H329 900 aa6.59□□□□□ -1.35
CLCN3-201ENST00000347613 HOMER2Q9NSB8 354 aa6.59□□□□□ -1.35
CLCN3-201ENST00000347613 GOLGA6AQ9NYA3 693 aa6.59□□□□□ -1.35
CLCN3-201ENST00000347613 DNAJC12Q9UKB3 198 aa6.59□□□□□ -1.35
CLCN3-201ENST00000347613 RIPK3Q9Y572 518 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms