RNA–Protein interactions for RNA: ENST00000345519.9

CLTA-202, Transcript of clathrin light chain A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLTA, Length 1,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-202ENST00000345519 ANKEF1Q9NU02 776 aa22.18■■□□□ 1.14
CLTA-202ENST00000345519 ST3GAL5Q9UNP4 418 aa22.18■■□□□ 1.14
CLTA-202ENST00000345519 SMC3Q9UQE7 1217 aa22.18■■□□□ 1.14
CLTA-202ENST00000345519 ADGRA3Q8IWK6 1321 aa22.17■■□□□ 1.14
CLTA-202ENST00000345519 DGKIO75912 1065 aa22.17■■□□□ 1.14
CLTA-202ENST00000345519 XRCC6P12956 609 aaKnown RBP eCLIP22.17■■□□□ 1.14
CLTA-202ENST00000345519 MUTP22033 750 aa22.17■■□□□ 1.14
CLTA-202ENST00000345519 PRPHP41219 470 aa22.17■■□□□ 1.14
CLTA-202ENST00000345519 GNL2Q13823 731 aaKnown RBP22.17■■□□□ 1.14
CLTA-202ENST00000345519 ZNF174Q15697 407 aa22.17■■□□□ 1.14
CLTA-202ENST00000345519 TMEM266Q2M3C6 531 aa22.17■■□□□ 1.14
CLTA-202ENST00000345519 RILPL1Q5EBL4 403 aa22.17■■□□□ 1.14
CLTA-202ENST00000345519 OTUD6AQ7L8S5 288 aa22.17■■□□□ 1.14
CLTA-202ENST00000345519 NPAS4Q8IUM7 802 aa22.17■■□□□ 1.14
CLTA-202ENST00000345519 IGSF22Q8N9C0 903 aa22.17■■□□□ 1.14
CLTA-202ENST00000345519 MAFAQ8NHW3 353 aaPredicted RBP22.17■■□□□ 1.14
CLTA-202ENST00000345519 SLC7A3Q8WY07 619 aa22.17■■□□□ 1.14
CLTA-202ENST00000345519 INTS4Q96HW7 963 aaKnown RBP22.17■■□□□ 1.14
CLTA-202ENST00000345519 CEP170P1Q96L14 293 aa22.17■■□□□ 1.14
CLTA-202ENST00000345519 TGS1Q96RS0 853 aaKnown RBP22.17■■□□□ 1.14
CLTA-202ENST00000345519 C1orf112Q9NSG2 853 aa22.17■■□□□ 1.14
CLTA-202ENST00000345519 PCDHB6Q9Y5E3 794 aa22.17■■□□□ 1.14
CLTA-202ENST00000345519 C9IYK1 514 aa22.16■■□□□ 1.14
CLTA-202ENST00000345519 RPA1P27694 616 aa22.16■■□□□ 1.14
CLTA-202ENST00000345519 DNM2P50570 870 aa22.16■■□□□ 1.14
CLTA-202ENST00000345519 NBR1Q14596 966 aa22.16■■□□□ 1.14
CLTA-202ENST00000345519 FAM117BQ6P1L5 589 aa22.16■■□□□ 1.14
CLTA-202ENST00000345519 CLP1Q92989 425 aaKnown RBP22.16■■□□□ 1.14
CLTA-202ENST00000345519 SAMD11Q96NU1 681 aa22.16■■□□□ 1.14
CLTA-202ENST00000345519 GINS2Q9Y248 185 aa22.16■■□□□ 1.14
CLTA-202ENST00000345519 ZBTB39O15060 712 aa22.15■■□□□ 1.14
CLTA-202ENST00000345519 ATP2B1P20020 1258 aa22.15■■□□□ 1.14
CLTA-202ENST00000345519 SARSP49591 514 aaKnown RBP22.15■■□□□ 1.14
CLTA-202ENST00000345519 RARRES1P49788 294 aa22.15■■□□□ 1.14
CLTA-202ENST00000345519 FAM189BP81408 668 aa22.15■■□□□ 1.14
CLTA-202ENST00000345519 CATSPER3Q86XQ3 398 aa22.15■■□□□ 1.14
CLTA-202ENST00000345519 TPH2Q8IWU9 490 aa22.15■■□□□ 1.14
CLTA-202ENST00000345519 YME1L1Q96TA2 773 aa22.15■■□□□ 1.14
CLTA-202ENST00000345519 IFT122Q9HBG6 1241 aa22.15■■□□□ 1.14
CLTA-202ENST00000345519 XPNPEP1Q9NQW7 623 aa22.15■■□□□ 1.14
CLTA-202ENST00000345519 C5orf67F2Z3F1 127 aa22.14■■□□□ 1.13
CLTA-202ENST00000345519 MED24O75448 989 aa22.14■■□□□ 1.13
CLTA-202ENST00000345519 TECP42680 631 aa22.14■■□□□ 1.13
CLTA-202ENST00000345519 POLGP54098 1239 aaPredicted RBP22.14■■□□□ 1.13
CLTA-202ENST00000345519 NFX1Q12986 1120 aaKnown RBP22.14■■□□□ 1.13
CLTA-202ENST00000345519 PTGDRQ13258 359 aa22.14■■□□□ 1.13
CLTA-202ENST00000345519 PDIA5Q14554 519 aa22.14■■□□□ 1.13
CLTA-202ENST00000345519 EMC2Q15006 297 aa22.14■■□□□ 1.13
CLTA-202ENST00000345519 SLC24A5Q71RS6 500 aa22.14■■□□□ 1.13
CLTA-202ENST00000345519 SNX21Q969T3 373 aa22.14■■□□□ 1.13
CLTA-202ENST00000345519 PPP1R16BQ96T49 567 aa22.14■■□□□ 1.13
CLTA-202ENST00000345519 TRAIPQ9BWF2 469 aa22.14■■□□□ 1.13
CLTA-202ENST00000345519 ELAC1Q9H777 363 aaKnown RBP22.14■■□□□ 1.13
CLTA-202ENST00000345519 SUCLA2Q9P2R7 463 aaPredicted RBP22.14■■□□□ 1.13
CLTA-202ENST00000345519 DBR1Q9UK59 544 aaKnown RBP22.14■■□□□ 1.13
CLTA-202ENST00000345519 BRWD1Q9NSI6 2320 aa22.13■■□□□ 1.13
CLTA-202ENST00000345519 DGAT1O75907 488 aa22.13■■□□□ 1.13
CLTA-202ENST00000345519 UPP2O95045 317 aa22.13■■□□□ 1.13
CLTA-202ENST00000345519 CMTR2Q8IYT2 770 aaKnown RBP22.13■■□□□ 1.13
CLTA-202ENST00000345519 ARNTL2Q8WYA1 636 aa22.13■■□□□ 1.13
CLTA-202ENST00000345519 ADAM2Q99965 735 aa22.13■■□□□ 1.13
CLTA-202ENST00000345519 RNF216Q9NWF9 866 aaPredicted RBP22.13■■□□□ 1.13
CLTA-202ENST00000345519 LMCD1Q9NZU5 365 aa22.13■■□□□ 1.13
CLTA-202ENST00000345519 COL4A3BPQ9Y5P4 624 aa22.13■■□□□ 1.13
CLTA-202ENST00000345519 A0A087WZ62 844 aa22.12■■□□□ 1.13
CLTA-202ENST00000345519 H3BQV1 296 aa22.12■■□□□ 1.13
CLTA-202ENST00000345519 STAG3L1P0CL83 205 aa22.12■■□□□ 1.13
CLTA-202ENST00000345519 ATP2C1P98194 919 aaPredicted RBP22.12■■□□□ 1.13
CLTA-202ENST00000345519 POU5F1BQ06416 359 aa22.12■■□□□ 1.13
CLTA-202ENST00000345519 XKR9Q5GH70 373 aa22.12■■□□□ 1.13
CLTA-202ENST00000345519 LARP1BQ659C4 914 aaKnown RBP22.12■■□□□ 1.13
CLTA-202ENST00000345519 HAUS3Q68CZ6 603 aa22.12■■□□□ 1.13
CLTA-202ENST00000345519 IFNLR1Q8IU57 520 aaPredicted RBP22.12■■□□□ 1.13
CLTA-202ENST00000345519 TCP11Q8WWU5 503 aa22.12■■□□□ 1.13
CLTA-202ENST00000345519 NLRP7Q8WX94 980 aa22.12■■□□□ 1.13
CLTA-202ENST00000345519 PSPC1Q8WXF1 523 aaKnown RBP22.12■■□□□ 1.13
CLTA-202ENST00000345519 MTRQ99707 1265 aa22.12■■□□□ 1.13
CLTA-202ENST00000345519 FDXACB1Q9BRP7 624 aaPredicted RBP22.12■■□□□ 1.13
CLTA-202ENST00000345519 C17orf80Q9BSJ5 609 aa22.12■■□□□ 1.13
CLTA-202ENST00000345519 GCOM2Q9BZD3 368 aaPredicted RBP22.12■■□□□ 1.13
CLTA-202ENST00000345519 MTCH2Q9Y6C9 303 aa22.12■■□□□ 1.13
CLTA-202ENST00000345519 TDRD15B5MCY1 1934 aaKnown RBP22.12■■□□□ 1.13
CLTA-202ENST00000345519 K7ELQ4 463 aaPredicted RBP22.11■■□□□ 1.13
CLTA-202ENST00000345519 ASAP2O43150 1006 aa22.11■■□□□ 1.13
CLTA-202ENST00000345519 GRB10Q13322 594 aa22.11■■□□□ 1.13
CLTA-202ENST00000345519 IL17AQ16552 155 aa22.11■■□□□ 1.13
CLTA-202ENST00000345519 FERMT3Q86UX7 667 aa22.11■■□□□ 1.13
CLTA-202ENST00000345519 RHPN2Q8IUC4 686 aa22.11■■□□□ 1.13
CLTA-202ENST00000345519 ERMNQ8TAM6 284 aa22.11■■□□□ 1.13
CLTA-202ENST00000345519 NFKBIZQ9BYH8 718 aa22.11■■□□□ 1.13
CLTA-202ENST00000345519 INO80BQ9C086 356 aaPredicted RBP22.11■■□□□ 1.13
CLTA-202ENST00000345519 CERS4Q9HA82 394 aa22.11■■□□□ 1.13
CLTA-202ENST00000345519 CHST12Q9NRB3 414 aa22.11■■□□□ 1.13
CLTA-202ENST00000345519 TMEM161AQ9NX61 479 aa22.11■■□□□ 1.13
CLTA-202ENST00000345519 RWDD3Q9Y3V2 267 aa22.11■■□□□ 1.13
CLTA-202ENST00000345519 STK24Q9Y6E0 443 aa22.11■■□□□ 1.13
CLTA-202ENST00000345519 DENND3A2RUS2 1198 aa22.1■■□□□ 1.13
CLTA-202ENST00000345519 PDCP20941 246 aa22.1■■□□□ 1.13
CLTA-202ENST00000345519 SFPQP23246 707 aaKnown RBP eCLIP22.1■■□□□ 1.13
CLTA-202ENST00000345519 EPC2Q52LR7 807 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms