RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 FPGSQ05932 587 aa13.17□□□□□ -0.3
SNCA-202ENST00000345009 ODR4Q5SWX8 454 aa13.17□□□□□ -0.3
SNCA-202ENST00000345009 HYIQ5T013 277 aa13.17□□□□□ -0.3
SNCA-202ENST00000345009 LRRC8DQ7L1W4 858 aa13.17□□□□□ -0.3
SNCA-202ENST00000345009 KIAA0319LQ8IZA0 1049 aa13.17□□□□□ -0.3
SNCA-202ENST00000345009 BADQ92934 168 aa13.17□□□□□ -0.3
SNCA-202ENST00000345009 CLIC6Q96NY7 704 aa13.17□□□□□ -0.3
SNCA-202ENST00000345009 CTAGE1Q96RT6 745 aa13.17□□□□□ -0.3
SNCA-202ENST00000345009 MTRQ99707 1265 aa13.17□□□□□ -0.3
SNCA-202ENST00000345009 MMTAG2Q9BU76 263 aaKnown RBP13.17□□□□□ -0.3
SNCA-202ENST00000345009 BHMT2Q9H2M3 363 aa13.17□□□□□ -0.3
SNCA-202ENST00000345009 DHX33Q9H6R0 707 aaKnown RBP13.17□□□□□ -0.3
SNCA-202ENST00000345009 ATP6V0A4Q9HBG4 840 aa13.17□□□□□ -0.3
SNCA-202ENST00000345009 FAM13BQ9NYF5 915 aa13.17□□□□□ -0.3
SNCA-202ENST00000345009 KCNG1Q9UIX4 513 aa13.17□□□□□ -0.3
SNCA-202ENST00000345009 TRIP12Q14669 1992 aaPredicted RBP13.17□□□□□ -0.3
SNCA-202ENST00000345009 IGKV6-21A0A0C4DH24 114 aa13.16□□□□□ -0.3
SNCA-202ENST00000345009 TMEM150BA6NC51 233 aa13.16□□□□□ -0.3
SNCA-202ENST00000345009 ZBTB39O15060 712 aa13.16□□□□□ -0.3
SNCA-202ENST00000345009 MRPS6P82932 125 aaKnown RBP13.16□□□□□ -0.3
SNCA-202ENST00000345009 MDM2Q00987 491 aaPredicted RBP13.16□□□□□ -0.3
SNCA-202ENST00000345009 MXD4Q14582 209 aaPredicted RBP13.16□□□□□ -0.3
SNCA-202ENST00000345009 EMC2Q15006 297 aa13.16□□□□□ -0.3
SNCA-202ENST00000345009 TRIM71Q2Q1W2 868 aaKnown RBP13.16□□□□□ -0.3
SNCA-202ENST00000345009 ZNF618Q5T7W0 954 aa13.16□□□□□ -0.3
SNCA-202ENST00000345009 RRAGBQ5VZM2 374 aa13.16□□□□□ -0.3
SNCA-202ENST00000345009 PADI6Q6TGC4 694 aa13.16□□□□□ -0.3
SNCA-202ENST00000345009 RUFY4Q6ZNE9 571 aa13.16□□□□□ -0.3
SNCA-202ENST00000345009 USP38Q8NB14 1042 aa13.16□□□□□ -0.3
SNCA-202ENST00000345009 LEO1Q8WVC0 666 aaPredicted RBP13.16□□□□□ -0.3
SNCA-202ENST00000345009 PSPC1Q8WXF1 523 aaKnown RBP13.16□□□□□ -0.3
SNCA-202ENST00000345009 DHX38Q92620 1227 aaKnown RBP13.16□□□□□ -0.3
SNCA-202ENST00000345009 SYMPKQ92797 1274 aaKnown RBP13.16□□□□□ -0.3
SNCA-202ENST00000345009 EPSTI1Q96J88 318 aa13.16□□□□□ -0.3
SNCA-202ENST00000345009 SCLT1Q96NL6 688 aa13.16□□□□□ -0.3
SNCA-202ENST00000345009 SH2D3AQ9BRG2 576 aa13.16□□□□□ -0.3
SNCA-202ENST00000345009 KCND2Q9NZV8 630 aa13.16□□□□□ -0.3
SNCA-202ENST00000345009 SUCLA2Q9P2R7 463 aaPredicted RBP13.16□□□□□ -0.3
SNCA-202ENST00000345009 STK17AQ9UEE5 414 aa13.16□□□□□ -0.3
SNCA-202ENST00000345009 PCDHA7Q9UN72 937 aa13.16□□□□□ -0.3
SNCA-202ENST00000345009 WDR81Q562E7 1941 aa13.15□□□□□ -0.3
SNCA-202ENST00000345009 SSBP05455 408 aaKnown RBP eCLIP13.15□□□□□ -0.3
SNCA-202ENST00000345009 CTSHP09668 335 aa13.15□□□□□ -0.3
SNCA-202ENST00000345009 ACTN1P12814 892 aa13.15□□□□□ -0.3
SNCA-202ENST00000345009 CYP11B2P19099 503 aa13.15□□□□□ -0.3
SNCA-202ENST00000345009 CLCN3P51790 818 aa13.15□□□□□ -0.3
SNCA-202ENST00000345009 GRIN1Q05586 938 aa13.15□□□□□ -0.3
SNCA-202ENST00000345009 GRB10Q13322 594 aa13.15□□□□□ -0.3
SNCA-202ENST00000345009 TFDP1Q14186 410 aa13.15□□□□□ -0.3
SNCA-202ENST00000345009 KARSQ15046 597 aaKnown RBP13.15□□□□□ -0.3
SNCA-202ENST00000345009 FAM26DQ5JW98 314 aa13.15□□□□□ -0.3
SNCA-202ENST00000345009 SPECC1Q5M775 1068 aa13.15□□□□□ -0.3
SNCA-202ENST00000345009 ADALQ6DHV7 355 aa13.15□□□□□ -0.3
SNCA-202ENST00000345009 LRRC71Q8N4P6 559 aa13.15□□□□□ -0.3
SNCA-202ENST00000345009 IQUBQ8NA54 791 aa13.15□□□□□ -0.3
SNCA-202ENST00000345009 PLIN2Q99541 437 aa13.15□□□□□ -0.3
SNCA-202ENST00000345009 TIPINQ9BVW5 301 aa13.15□□□□□ -0.3
SNCA-202ENST00000345009 CELF4Q9BZC1 486 aaKnown RBP13.15□□□□□ -0.3
SNCA-202ENST00000345009 INO80BQ9C086 356 aaPredicted RBP13.15□□□□□ -0.3
SNCA-202ENST00000345009 LRRC27Q9C0I9 530 aa13.15□□□□□ -0.3
SNCA-202ENST00000345009 MTIF3Q9H2K0 278 aaKnown RBP13.15□□□□□ -0.3
SNCA-202ENST00000345009 TRPV2Q9Y5S1 764 aa13.15□□□□□ -0.3
SNCA-202ENST00000345009 SQORQ9Y6N5 450 aa13.15□□□□□ -0.3
SNCA-202ENST00000345009 A0A087WWV3 80 aa13.14□□□□□ -0.31
SNCA-202ENST00000345009 E9PMD0 336 aa13.14□□□□□ -0.31
SNCA-202ENST00000345009 USO1O60763 962 aaKnown RBP13.14□□□□□ -0.31
SNCA-202ENST00000345009 PLA2G4BP0C869 781 aa13.14□□□□□ -0.31
SNCA-202ENST00000345009 CSF2RAP15509 400 aa13.14□□□□□ -0.31
SNCA-202ENST00000345009 PLCG1P19174 1290 aa13.14□□□□□ -0.31
SNCA-202ENST00000345009 CMA1P23946 247 aa13.14□□□□□ -0.31
SNCA-202ENST00000345009 STAT6P42226 847 aa13.14□□□□□ -0.31
SNCA-202ENST00000345009 MAGEA10P43363 369 aaPredicted RBP13.14□□□□□ -0.31
SNCA-202ENST00000345009 CRYBB1P53674 252 aaPredicted RBP13.14□□□□□ -0.31
SNCA-202ENST00000345009 ECM1Q16610 540 aa13.14□□□□□ -0.31
SNCA-202ENST00000345009 TMEM119Q4V9L6 283 aa13.14□□□□□ -0.31
SNCA-202ENST00000345009 AXDND1Q5T1B0 1012 aaPredicted RBP13.14□□□□□ -0.31
SNCA-202ENST00000345009 PSRC1Q6PGN9 363 aaPredicted RBP13.14□□□□□ -0.31
SNCA-202ENST00000345009 SYT2Q8N9I0 419 aaPredicted RBP13.14□□□□□ -0.31
SNCA-202ENST00000345009 NLRP7Q8WX94 980 aa13.14□□□□□ -0.31
SNCA-202ENST00000345009 KIFAP3Q92845 792 aa13.14□□□□□ -0.31
SNCA-202ENST00000345009 WNT8BQ93098 351 aa13.14□□□□□ -0.31
SNCA-202ENST00000345009 ZBTB10Q96DT7 871 aa13.14□□□□□ -0.31
SNCA-202ENST00000345009 CCDC34Q96HJ3 373 aa13.14□□□□□ -0.31
SNCA-202ENST00000345009 SCLYQ96I15 445 aa13.14□□□□□ -0.31
SNCA-202ENST00000345009 PNMA5Q96PV4 448 aa13.14□□□□□ -0.31
SNCA-202ENST00000345009 CEP89Q96ST8 783 aa13.14□□□□□ -0.31
SNCA-202ENST00000345009 GCOM2Q9BZD3 368 aaPredicted RBP13.14□□□□□ -0.31
SNCA-202ENST00000345009 UBE2OQ9C0C9 1292 aaKnown RBP13.14□□□□□ -0.31
SNCA-202ENST00000345009 WNT8AQ9H1J5 351 aa13.14□□□□□ -0.31
SNCA-202ENST00000345009 CUEDC2Q9H467 287 aa13.14□□□□□ -0.31
SNCA-202ENST00000345009 IL23AQ9NPF7 189 aa13.14□□□□□ -0.31
SNCA-202ENST00000345009 GINS2Q9Y248 185 aa13.14□□□□□ -0.31
SNCA-202ENST00000345009 CDY2AQ9Y6F7 541 aa13.14□□□□□ -0.31
SNCA-202ENST00000345009 UMODL1Q5DID0 1318 aa13.13□□□□□ -0.31
SNCA-202ENST00000345009 EVPLQ92817 2033 aa13.13□□□□□ -0.31
SNCA-202ENST00000345009 EFCAB14O75071 495 aa13.13□□□□□ -0.31
SNCA-202ENST00000345009 FGBP02675 491 aa13.13□□□□□ -0.31
SNCA-202ENST00000345009 CHRNA1P02708 482 aa13.13□□□□□ -0.31
SNCA-202ENST00000345009 VTNP04004 478 aa13.13□□□□□ -0.31
SNCA-202ENST00000345009 KRT18P05783 430 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms