RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 OSBPL7Q9BZF2 842 aa23.15■■□□□ 1.3
SMARCB1-202ENST00000344921 CCSER1Q9C0I3 900 aa23.15■■□□□ 1.3
SMARCB1-202ENST00000344921 PRO3102Q9H379 93 aa23.15■■□□□ 1.3
SMARCB1-202ENST00000344921 CDHR5Q9HBB8 845 aa23.15■■□□□ 1.3
SMARCB1-202ENST00000344921 RANBP2P49792 3224 aaKnown RBP23.14■■□□□ 1.3
SMARCB1-202ENST00000344921 ZBBXA8MT70 800 aa23.14■■□□□ 1.3
SMARCB1-202ENST00000344921 RBAK-RBAKDNI3L0D1 243 aa23.14■■□□□ 1.3
SMARCB1-202ENST00000344921 CRYBB1P53674 252 aaPredicted RBP23.14■■□□□ 1.3
SMARCB1-202ENST00000344921 KCNK18Q7Z418 384 aa23.14■■□□□ 1.3
SMARCB1-202ENST00000344921 DBF4BQ8NFT6 615 aa23.14■■□□□ 1.3
SMARCB1-202ENST00000344921 PRPF31Q8WWY3 499 aaKnown RBP23.14■■□□□ 1.3
SMARCB1-202ENST00000344921 IFIH1Q9BYX4 1025 aaKnown RBP23.14■■□□□ 1.3
SMARCB1-202ENST00000344921 MTIF3Q9H2K0 278 aaKnown RBP23.14■■□□□ 1.3
SMARCB1-202ENST00000344921 XPNPEP1Q9NQW7 623 aa23.14■■□□□ 1.3
SMARCB1-202ENST00000344921 RCOR1Q9UKL0 485 aa23.14■■□□□ 1.3
SMARCB1-202ENST00000344921 CIZ1Q9ULV3 898 aaPredicted RBP23.14■■□□□ 1.3
SMARCB1-202ENST00000344921 TET1Q8NFU7 2136 aa23.14■■□□□ 1.29
SMARCB1-202ENST00000344921 CUTAO60888 179 aa23.13■■□□□ 1.29
SMARCB1-202ENST00000344921 GPR32O75388 356 aa23.13■■□□□ 1.29
SMARCB1-202ENST00000344921 GPC3P51654 580 aa23.13■■□□□ 1.29
SMARCB1-202ENST00000344921 LPIN1Q14693 890 aa23.13■■□□□ 1.29
SMARCB1-202ENST00000344921 CNKSR3Q6P9H4 555 aa23.13■■□□□ 1.29
SMARCB1-202ENST00000344921 MCPH1Q8NEM0 835 aa23.13■■□□□ 1.29
SMARCB1-202ENST00000344921 SEPT8Q92599 483 aa23.13■■□□□ 1.29
SMARCB1-202ENST00000344921 VWCEQ96DN2 955 aa23.13■■□□□ 1.29
SMARCB1-202ENST00000344921 NLRP4Q96MN2 994 aa23.13■■□□□ 1.29
SMARCB1-202ENST00000344921 COL4A3BPQ9Y5P4 624 aa23.13■■□□□ 1.29
SMARCB1-202ENST00000344921 LOXHD1Q8IVV2 1947 aa23.13■■□□□ 1.29
SMARCB1-202ENST00000344921 SIP14410 1827 aa23.13■■□□□ 1.29
SMARCB1-202ENST00000344921 PLCG1P19174 1290 aa23.13■■□□□ 1.29
SMARCB1-202ENST00000344921 TMEM119Q4V9L6 283 aa23.13■■□□□ 1.29
SMARCB1-202ENST00000344921 PLEKHG4Q58EX7 1191 aa23.13■■□□□ 1.29
SMARCB1-202ENST00000344921 FAM102BQ5T8I3 360 aa23.13■■□□□ 1.29
SMARCB1-202ENST00000344921 TSHZ1Q6ZSZ6 1077 aa23.13■■□□□ 1.29
SMARCB1-202ENST00000344921 KSR1Q8IVT5 923 aa23.13■■□□□ 1.29
SMARCB1-202ENST00000344921 USP38Q8NB14 1042 aa23.13■■□□□ 1.29
SMARCB1-202ENST00000344921 SCAND2PQ9GZW5 306 aaPredicted RBP23.13■■□□□ 1.29
SMARCB1-202ENST00000344921 PCDHA7Q9UN72 937 aa23.13■■□□□ 1.29
SMARCB1-202ENST00000344921 RPS6KA5O75582 802 aa23.12■■□□□ 1.29
SMARCB1-202ENST00000344921 SRGAP2CP0DJJ0 459 aa23.12■■□□□ 1.29
SMARCB1-202ENST00000344921 IKBKEQ14164 716 aa23.12■■□□□ 1.29
SMARCB1-202ENST00000344921 DHX8Q14562 1220 aaKnown RBP23.12■■□□□ 1.29
SMARCB1-202ENST00000344921 LEO1Q8WVC0 666 aaPredicted RBP23.12■■□□□ 1.29
SMARCB1-202ENST00000344921 SQORQ9Y6N5 450 aa23.12■■□□□ 1.29
SMARCB1-202ENST00000344921 CYP11B2P19099 503 aa23.11■■□□□ 1.29
SMARCB1-202ENST00000344921 CD52P31358 61 aa23.11■■□□□ 1.29
SMARCB1-202ENST00000344921 LAMTOR4Q0VGL1 99 aa23.11■■□□□ 1.29
SMARCB1-202ENST00000344921 NFX1Q12986 1120 aaKnown RBP23.11■■□□□ 1.29
SMARCB1-202ENST00000344921 PAK2Q13177 524 aa23.11■■□□□ 1.29
SMARCB1-202ENST00000344921 MXD4Q14582 209 aaPredicted RBP23.11■■□□□ 1.29
SMARCB1-202ENST00000344921 TMEM40Q8WWA1 233 aa23.11■■□□□ 1.29
SMARCB1-202ENST00000344921 HERVK_113Q902F9 699 aa23.11■■□□□ 1.29
SMARCB1-202ENST00000344921 PANK2Q9BZ23 570 aa23.11■■□□□ 1.29
SMARCB1-202ENST00000344921 POLR3FQ9H1D9 316 aaPredicted RBP23.11■■□□□ 1.29
SMARCB1-202ENST00000344921 ADAMTS10Q9H324 1103 aa23.11■■□□□ 1.29
SMARCB1-202ENST00000344921 TCHHQ07283 1943 aa23.11■■□□□ 1.29
SMARCB1-202ENST00000344921 A0A087WZ62 844 aa23.11■■□□□ 1.29
SMARCB1-202ENST00000344921 A0A1W2PPC1 479 aa23.11■■□□□ 1.29
SMARCB1-202ENST00000344921 ASAP2O43150 1006 aa23.11■■□□□ 1.29
SMARCB1-202ENST00000344921 PLA2G4BP0C869 781 aa23.11■■□□□ 1.29
SMARCB1-202ENST00000344921 EIF4BP23588 611 aaKnown RBP23.11■■□□□ 1.29
SMARCB1-202ENST00000344921 RRAGBQ5VZM2 374 aa23.11■■□□□ 1.29
SMARCB1-202ENST00000344921 ZNF410Q86VK4 478 aa23.11■■□□□ 1.29
SMARCB1-202ENST00000344921 APBB2Q92870 758 aa23.11■■□□□ 1.29
SMARCB1-202ENST00000344921 FDXACB1Q9BRP7 624 aaPredicted RBP23.11■■□□□ 1.29
SMARCB1-202ENST00000344921 GCOM2Q9BZD3 368 aaPredicted RBP23.11■■□□□ 1.29
SMARCB1-202ENST00000344921 AGO3Q9H9G7 860 aaKnown RBP23.11■■□□□ 1.29
SMARCB1-202ENST00000344921 GPRC5CQ9NQ84 441 aa23.11■■□□□ 1.29
SMARCB1-202ENST00000344921 PADI3Q9ULW8 664 aa23.11■■□□□ 1.29
SMARCB1-202ENST00000344921 NOC2LQ9Y3T9 749 aaKnown RBP23.11■■□□□ 1.29
SMARCB1-202ENST00000344921 ODR4Q5SWX8 454 aa23.1■■□□□ 1.29
SMARCB1-202ENST00000344921 PDILTQ8N807 584 aa23.1■■□□□ 1.29
SMARCB1-202ENST00000344921 SYT2Q8N9I0 419 aaPredicted RBP23.1■■□□□ 1.29
SMARCB1-202ENST00000344921 CHMP5Q9NZZ3 219 aa23.1■■□□□ 1.29
SMARCB1-202ENST00000344921 BAIAP3O94812 1187 aa23.09■■□□□ 1.29
SMARCB1-202ENST00000344921 KCNJ6P48051 423 aa23.09■■□□□ 1.29
SMARCB1-202ENST00000344921 TFDP1Q14186 410 aa23.09■■□□□ 1.29
SMARCB1-202ENST00000344921 TPRNQ4KMQ1 711 aa23.09■■□□□ 1.29
SMARCB1-202ENST00000344921 AXDND1Q5T1B0 1012 aaPredicted RBP23.09■■□□□ 1.29
SMARCB1-202ENST00000344921 RINT1Q6NUQ1 792 aa23.09■■□□□ 1.29
SMARCB1-202ENST00000344921 RNF149Q8NC42 400 aa23.09■■□□□ 1.29
SMARCB1-202ENST00000344921 IPO9Q96P70 1041 aaKnown RBP23.09■■□□□ 1.29
SMARCB1-202ENST00000344921 GDPD2Q9HCC8 539 aa23.09■■□□□ 1.29
SMARCB1-202ENST00000344921 POLD4Q9HCU8 107 aa23.09■■□□□ 1.29
SMARCB1-202ENST00000344921 CXXC1Q9P0U4 656 aaPredicted RBP23.09■■□□□ 1.29
SMARCB1-202ENST00000344921 SLC4A7Q9Y6M7 1214 aa23.09■■□□□ 1.29
SMARCB1-202ENST00000344921 ABHD14A-ACY1A0A1B0GW23 586 aa23.08■■□□□ 1.29
SMARCB1-202ENST00000344921 GPR182O15218 404 aa23.08■■□□□ 1.29
SMARCB1-202ENST00000344921 CSDE1O75534 798 aaKnown RBP23.08■■□□□ 1.29
SMARCB1-202ENST00000344921 ARL2P36404 184 aa23.08■■□□□ 1.29
SMARCB1-202ENST00000344921 TCTN1Q2MV58 587 aa23.08■■□□□ 1.29
SMARCB1-202ENST00000344921 SHC4Q6S5L8 630 aa23.08■■□□□ 1.29
SMARCB1-202ENST00000344921 CCDC73Q6ZRK6 1079 aa23.08■■□□□ 1.29
SMARCB1-202ENST00000344921 LARP4BQ92615 738 aaKnown RBP23.08■■□□□ 1.29
SMARCB1-202ENST00000344921 RAD54LQ92698 747 aa23.08■■□□□ 1.29
SMARCB1-202ENST00000344921 RUSC1Q9BVN2 902 aa23.08■■□□□ 1.29
SMARCB1-202ENST00000344921 INO80BQ9C086 356 aaPredicted RBP23.08■■□□□ 1.29
SMARCB1-202ENST00000344921 FAM13BQ9NYF5 915 aa23.08■■□□□ 1.29
SMARCB1-202ENST00000344921 DARSP14868 501 aaKnown RBP23.08■■□□□ 1.28
SMARCB1-202ENST00000344921 STAT6P42226 847 aa23.08■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms