RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 JAK3P52333 1124 aa13.98□□□□□ -0.17
SGCA-202ENST00000344627 PLCB3Q01970 1234 aa13.98□□□□□ -0.17
SGCA-202ENST00000344627 PRKCEQ02156 737 aa13.98□□□□□ -0.17
SGCA-202ENST00000344627 CAMK1Q14012 370 aa13.98□□□□□ -0.17
SGCA-202ENST00000344627 BMS1Q14692 1282 aaKnown RBP13.98□□□□□ -0.17
SGCA-202ENST00000344627 INF2Q27J81 1249 aa13.98□□□□□ -0.17
SGCA-202ENST00000344627 LETM2Q2VYF4 491 aa13.98□□□□□ -0.17
SGCA-202ENST00000344627 Q4G0T1 1027 aa13.98□□□□□ -0.17
SGCA-202ENST00000344627 SPOUT1Q5T280 376 aaKnown RBP13.98□□□□□ -0.17
SGCA-202ENST00000344627 KRT25Q7Z3Z0 450 aa13.98□□□□□ -0.17
SGCA-202ENST00000344627 LRRC71Q8N4P6 559 aa13.98□□□□□ -0.17
SGCA-202ENST00000344627 MAP7D2Q96T17 732 aa13.98□□□□□ -0.17
SGCA-202ENST00000344627 ADAM2Q99965 735 aa13.98□□□□□ -0.17
SGCA-202ENST00000344627 TMX1Q9H3N1 280 aa13.98□□□□□ -0.17
SGCA-202ENST00000344627 NGRNQ9NPE2 291 aaKnown RBP13.98□□□□□ -0.17
SGCA-202ENST00000344627 TLR9Q9NR96 1032 aa13.98□□□□□ -0.17
SGCA-202ENST00000344627 ORC3Q9UBD5 711 aaPredicted RBP13.98□□□□□ -0.17
SGCA-202ENST00000344627 DDX25Q9UHL0 483 aaKnown RBP13.98□□□□□ -0.17
SGCA-202ENST00000344627 ST3GAL5Q9UNP4 418 aa13.98□□□□□ -0.17
SGCA-202ENST00000344627 FAM86C2PA6NEL3 165 aa13.97□□□□□ -0.17
SGCA-202ENST00000344627 C9IYK1 514 aa13.97□□□□□ -0.17
SGCA-202ENST00000344627 ZNF862O60290 1169 aa13.97□□□□□ -0.17
SGCA-202ENST00000344627 PFKFB2O60825 505 aa13.97□□□□□ -0.17
SGCA-202ENST00000344627 EIF5BO60841 1220 aaKnown RBP13.97□□□□□ -0.17
SGCA-202ENST00000344627 TBX10O75333 385 aa13.97□□□□□ -0.17
SGCA-202ENST00000344627 AK2P54819 239 aa13.97□□□□□ -0.17
SGCA-202ENST00000344627 NLRP11P59045 1033 aaKnown RBP13.97□□□□□ -0.17
SGCA-202ENST00000344627 ANAPC15P60006 121 aa13.97□□□□□ -0.17
SGCA-202ENST00000344627 UGCGQ16739 394 aa13.97□□□□□ -0.17
SGCA-202ENST00000344627 TMEM184AQ6ZMB5 413 aa13.97□□□□□ -0.17
SGCA-202ENST00000344627 NECAB1Q8N987 351 aa13.97□□□□□ -0.17
SGCA-202ENST00000344627 DAGLBQ8NCG7 672 aa13.97□□□□□ -0.17
SGCA-202ENST00000344627 RDM1Q8NG50 284 aa13.97□□□□□ -0.17
SGCA-202ENST00000344627 EDAQ92838 391 aa13.97□□□□□ -0.17
SGCA-202ENST00000344627 ZNF668Q96K58 619 aaPredicted RBP13.97□□□□□ -0.17
SGCA-202ENST00000344627 TMEM117Q9H0C3 514 aa13.97□□□□□ -0.17
SGCA-202ENST00000344627 IGFLR1Q9H665 355 aa13.97□□□□□ -0.17
SGCA-202ENST00000344627 TLE6Q9H808 572 aa13.97□□□□□ -0.17
SGCA-202ENST00000344627 SEPT9Q9UHD8 586 aaPredicted RBP13.97□□□□□ -0.17
SGCA-202ENST00000344627 CYP3A7-CYP3A51PA0A087WV96 503 aa13.96□□□□□ -0.17
SGCA-202ENST00000344627 DDX11L8A8MPP1 907 aa13.96□□□□□ -0.17
SGCA-202ENST00000344627 PSMD10O75832 226 aa13.96□□□□□ -0.17
SGCA-202ENST00000344627 EOMESO95936 686 aa13.96□□□□□ -0.17
SGCA-202ENST00000344627 HOXB8P17481 243 aaPredicted RBP13.96□□□□□ -0.17
SGCA-202ENST00000344627 CYP3A7P24462 503 aa13.96□□□□□ -0.17
SGCA-202ENST00000344627 GATMP50440 423 aa13.96□□□□□ -0.17
SGCA-202ENST00000344627 KRT17Q04695 432 aa13.96□□□□□ -0.17
SGCA-202ENST00000344627 TBC1D8BQ0IIM8 1120 aa13.96□□□□□ -0.17
SGCA-202ENST00000344627 CBX2Q14781 532 aaPredicted RBP13.96□□□□□ -0.17
SGCA-202ENST00000344627 MTERF2Q49AM1 385 aa13.96□□□□□ -0.17
SGCA-202ENST00000344627 RNF135Q8IUD6 432 aa13.96□□□□□ -0.17
SGCA-202ENST00000344627 MICAL1Q8TDZ2 1067 aa13.96□□□□□ -0.17
SGCA-202ENST00000344627 TMEM40Q8WWA1 233 aa13.96□□□□□ -0.17
SGCA-202ENST00000344627 WASF1Q92558 559 aa13.96□□□□□ -0.17
SGCA-202ENST00000344627 PHF20Q9BVI0 1012 aa13.96□□□□□ -0.17
SGCA-202ENST00000344627 PHF7Q9BWX1 381 aaPredicted RBP13.96□□□□□ -0.17
SGCA-202ENST00000344627 GJB4Q9NTQ9 266 aa13.96□□□□□ -0.17
SGCA-202ENST00000344627 STK39Q9UEW8 545 aa13.96□□□□□ -0.17
SGCA-202ENST00000344627 STK36Q9NRP7 1315 aa13.95□□□□□ -0.18
SGCA-202ENST00000344627 TBKBP1A7MCY6 615 aa13.95□□□□□ -0.18
SGCA-202ENST00000344627 LOC730098B7Z3J9 87 aa13.95□□□□□ -0.18
SGCA-202ENST00000344627 M0R2N6 131 aa13.95□□□□□ -0.18
SGCA-202ENST00000344627 MGEA5O60502 916 aa13.95□□□□□ -0.18
SGCA-202ENST00000344627 CCNT1O60563 726 aaKnown RBP13.95□□□□□ -0.18
SGCA-202ENST00000344627 GPR32O75388 356 aa13.95□□□□□ -0.18
SGCA-202ENST00000344627 FGF18O76093 207 aa13.95□□□□□ -0.18
SGCA-202ENST00000344627 EIF4BP23588 611 aaKnown RBP13.95□□□□□ -0.18
SGCA-202ENST00000344627 NRIP1P48552 1158 aa13.95□□□□□ -0.18
SGCA-202ENST00000344627 NEK4P51957 841 aa13.95□□□□□ -0.18
SGCA-202ENST00000344627 FOSBP53539 338 aa13.95□□□□□ -0.18
SGCA-202ENST00000344627 DLX2Q07687 328 aaPredicted RBP13.95□□□□□ -0.18
SGCA-202ENST00000344627 NPY5RQ15761 445 aa13.95□□□□□ -0.18
SGCA-202ENST00000344627 DUSP6Q16828 381 aa13.95□□□□□ -0.18
SGCA-202ENST00000344627 PIK3AP1Q6ZUJ8 805 aa13.95□□□□□ -0.18
SGCA-202ENST00000344627 NEK8Q86SG6 692 aa13.95□□□□□ -0.18
SGCA-202ENST00000344627 FAM228AQ86W67 206 aa13.95□□□□□ -0.18
SGCA-202ENST00000344627 THNSL1Q8IYQ7 743 aa13.95□□□□□ -0.18
SGCA-202ENST00000344627 ABI1Q8IZP0 508 aa13.95□□□□□ -0.18
SGCA-202ENST00000344627 NLRP7Q8WX94 980 aa13.95□□□□□ -0.18
SGCA-202ENST00000344627 MRPS27Q92552 414 aaKnown RBP13.95□□□□□ -0.18
SGCA-202ENST00000344627 IRF2BPLQ9H1B7 796 aa13.95□□□□□ -0.18
SGCA-202ENST00000344627 BRMS1Q9HCU9 246 aa13.95□□□□□ -0.18
SGCA-202ENST00000344627 CHST12Q9NRB3 414 aa13.95□□□□□ -0.18
SGCA-202ENST00000344627 DACT1Q9NYF0 836 aa13.95□□□□□ -0.18
SGCA-202ENST00000344627 CLEC1BQ9P126 229 aa13.95□□□□□ -0.18
SGCA-202ENST00000344627 SLC37A4O43826 429 aa13.94□□□□□ -0.18
SGCA-202ENST00000344627 SKIP12755 728 aa13.94□□□□□ -0.18
SGCA-202ENST00000344627 DNAJB1P25685 340 aa13.94□□□□□ -0.18
SGCA-202ENST00000344627 DNM2P50570 870 aa13.94□□□□□ -0.18
SGCA-202ENST00000344627 NUBP1P53384 320 aa13.94□□□□□ -0.18
SGCA-202ENST00000344627 DSC3Q14574 896 aa13.94□□□□□ -0.18
SGCA-202ENST00000344627 XKR3Q5GH77 459 aa13.94□□□□□ -0.18
SGCA-202ENST00000344627 MOXD1Q6UVY6 613 aa13.94□□□□□ -0.18
SGCA-202ENST00000344627 EXOC8Q8IYI6 725 aa13.94□□□□□ -0.18
SGCA-202ENST00000344627 LRRC43Q8N309 656 aa13.94□□□□□ -0.18
SGCA-202ENST00000344627 COLGALT1Q8NBJ5 622 aa13.94□□□□□ -0.18
SGCA-202ENST00000344627 ETNPPLQ8TBG4 499 aa13.94□□□□□ -0.18
SGCA-202ENST00000344627 OXER1Q8TDS5 423 aa13.94□□□□□ -0.18
SGCA-202ENST00000344627 JPH2Q9BR39 696 aaPredicted RBP13.94□□□□□ -0.18
SGCA-202ENST00000344627 SH2D3AQ9BRG2 576 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms