RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 KIAA0391O15091 583 aaKnown RBP17.7■□□□□ 0.42
SMARCA4-201ENST00000344626 LRRN2O75325 713 aa17.7■□□□□ 0.42
SMARCA4-201ENST00000344626 RNF187Q5TA31 235 aaPredicted RBP17.7■□□□□ 0.42
SMARCA4-201ENST00000344626 LRRC71Q8N4P6 559 aa17.7■□□□□ 0.42
SMARCA4-201ENST00000344626 ZNF653Q96CK0 615 aa17.7■□□□□ 0.42
SMARCA4-201ENST00000344626 EIF3CQ99613 913 aaKnown RBP17.7■□□□□ 0.42
SMARCA4-201ENST00000344626 XPNPEP3Q9NQH7 507 aa17.7■□□□□ 0.42
SMARCA4-201ENST00000344626 TYW1Q9NV66 732 aaKnown RBP17.7■□□□□ 0.42
SMARCA4-201ENST00000344626 SOCS7O14512 581 aa17.7■□□□□ 0.42
SMARCA4-201ENST00000344626 NR3C1P04150 777 aa17.7■□□□□ 0.42
SMARCA4-201ENST00000344626 DNAJC24Q6P3W2 148 aa17.7■□□□□ 0.42
SMARCA4-201ENST00000344626 GANCQ8TET4 914 aa17.7■□□□□ 0.42
SMARCA4-201ENST00000344626 FAM213AQ9BRX8 229 aa17.7■□□□□ 0.42
SMARCA4-201ENST00000344626 MYPNQ86TC9 1320 aa17.7■□□□□ 0.42
SMARCA4-201ENST00000344626 GRIK5Q16478 980 aa17.7■□□□□ 0.42
SMARCA4-201ENST00000344626 ZNF394Q53GI3 561 aa17.7■□□□□ 0.42
SMARCA4-201ENST00000344626 C10orf76Q5T2E6 689 aa17.7■□□□□ 0.42
SMARCA4-201ENST00000344626 GLYCTKQ8IVS8 523 aa17.7■□□□□ 0.42
SMARCA4-201ENST00000344626 KCNK3O14649 394 aa17.7■□□□□ 0.42
SMARCA4-201ENST00000344626 SUPT20HL2P0C7V6 817 aa17.7■□□□□ 0.42
SMARCA4-201ENST00000344626 CASP14P31944 242 aa17.7■□□□□ 0.42
SMARCA4-201ENST00000344626 DSG3P32926 999 aa17.7■□□□□ 0.42
SMARCA4-201ENST00000344626 ERVK-9P63128 1117 aa17.7■□□□□ 0.42
SMARCA4-201ENST00000344626 ERVK-24P63145 666 aa17.7■□□□□ 0.42
SMARCA4-201ENST00000344626 PRPSAP1Q14558 356 aa17.7■□□□□ 0.42
SMARCA4-201ENST00000344626 CPSF3Q9UKF6 684 aaKnown RBP17.7■□□□□ 0.42
SMARCA4-201ENST00000344626 KNOP1Q1ED39 458 aaKnown RBP17.69■□□□□ 0.42
SMARCA4-201ENST00000344626 OR6B2Q6IFH4 312 aa17.69■□□□□ 0.42
SMARCA4-201ENST00000344626 MXRA8Q9BRK3 442 aa17.69■□□□□ 0.42
SMARCA4-201ENST00000344626 TRIM31Q9BZY9 425 aa17.69■□□□□ 0.42
SMARCA4-201ENST00000344626 TMEM39AQ9NV64 488 aa17.69■□□□□ 0.42
SMARCA4-201ENST00000344626 CRCPO75575 148 aa17.69■□□□□ 0.42
SMARCA4-201ENST00000344626 CFAP157Q5JU67 520 aa17.69■□□□□ 0.42
SMARCA4-201ENST00000344626 GOLGA8SH3BPF8 625 aa17.69■□□□□ 0.42
SMARCA4-201ENST00000344626 CDC25BP30305 580 aa17.69■□□□□ 0.42
SMARCA4-201ENST00000344626 RFC5P40937 340 aa17.69■□□□□ 0.42
SMARCA4-201ENST00000344626 KCTD17Q8N5Z5 321 aa17.69■□□□□ 0.42
SMARCA4-201ENST00000344626 PGBD4Q96DM1 585 aa17.69■□□□□ 0.42
SMARCA4-201ENST00000344626 PSMB7Q99436 277 aa17.69■□□□□ 0.42
SMARCA4-201ENST00000344626 RIT2Q99578 217 aa17.69■□□□□ 0.42
SMARCA4-201ENST00000344626 STXBP3O00186 592 aa17.69■□□□□ 0.42
SMARCA4-201ENST00000344626 ASAP2O43150 1006 aa17.69■□□□□ 0.42
SMARCA4-201ENST00000344626 TCF7P36402 384 aaPredicted RBP17.69■□□□□ 0.42
SMARCA4-201ENST00000344626 BFSP2Q13515 415 aa17.69■□□□□ 0.42
SMARCA4-201ENST00000344626 C17orf102A2RUQ5 167 aa17.68■□□□□ 0.42
SMARCA4-201ENST00000344626 TADA2AO75478 443 aa17.68■□□□□ 0.42
SMARCA4-201ENST00000344626 KRT10P13645 584 aa17.68■□□□□ 0.42
SMARCA4-201ENST00000344626 SHMT1P34896 483 aa17.68■□□□□ 0.42
SMARCA4-201ENST00000344626 CLCN1P35523 988 aa17.68■□□□□ 0.42
SMARCA4-201ENST00000344626 SLC12A2P55011 1212 aa17.68■□□□□ 0.42
SMARCA4-201ENST00000344626 PAK2Q13177 524 aa17.68■□□□□ 0.42
SMARCA4-201ENST00000344626 ZNF699Q32M78 642 aa17.68■□□□□ 0.42
SMARCA4-201ENST00000344626 C4orf50Q6ZRC1 276 aa17.68■□□□□ 0.42
SMARCA4-201ENST00000344626 GMCL1P1Q8NEA9 526 aa17.68■□□□□ 0.42
SMARCA4-201ENST00000344626 SENP6Q9GZR1 1112 aaPredicted RBP17.68■□□□□ 0.42
SMARCA4-201ENST00000344626 KCNH7Q9NS40 1196 aa17.68■□□□□ 0.42
SMARCA4-201ENST00000344626 SPDYE16A6NNV3 312 aaPredicted RBP17.68■□□□□ 0.42
SMARCA4-201ENST00000344626 GIPC1O14908 333 aa17.68■□□□□ 0.42
SMARCA4-201ENST00000344626 TCP1P17987 556 aaKnown RBP17.68■□□□□ 0.42
SMARCA4-201ENST00000344626 ARL4AP40617 200 aa17.68■□□□□ 0.42
SMARCA4-201ENST00000344626 BSPRYQ5W0U4 402 aa17.68■□□□□ 0.42
SMARCA4-201ENST00000344626 GPRASP2Q96D09 838 aa17.68■□□□□ 0.42
SMARCA4-201ENST00000344626 RUNDC3BQ96NL0 473 aa17.68■□□□□ 0.42
SMARCA4-201ENST00000344626 KCND2Q9NZV8 630 aa17.68■□□□□ 0.42
SMARCA4-201ENST00000344626 SLC8A2Q9UPR5 921 aa17.68■□□□□ 0.42
SMARCA4-201ENST00000344626 ATRNO75882 1429 aa17.68■□□□□ 0.42
SMARCA4-201ENST00000344626 ESYT2A0FGR8 921 aa17.68■□□□□ 0.42
SMARCA4-201ENST00000344626 RRN3P2A6NIE6 340 aa17.68■□□□□ 0.42
SMARCA4-201ENST00000344626 PP2D1A8MPX8 630 aa17.68■□□□□ 0.42
SMARCA4-201ENST00000344626 NFIBO00712 420 aa17.68■□□□□ 0.42
SMARCA4-201ENST00000344626 HBP1O60381 514 aa17.68■□□□□ 0.42
SMARCA4-201ENST00000344626 IFNB1P01574 187 aa17.68■□□□□ 0.42
SMARCA4-201ENST00000344626 TRIM7Q9C029 511 aa17.68■□□□□ 0.42
SMARCA4-201ENST00000344626 BUB1O43683 1085 aa17.68■□□□□ 0.42
SMARCA4-201ENST00000344626 DGKZQ13574 1117 aa17.68■□□□□ 0.42
SMARCA4-201ENST00000344626 NAALADL2Q58DX5 795 aa17.68■□□□□ 0.42
SMARCA4-201ENST00000344626 HDXQ7Z353 690 aa17.68■□□□□ 0.42
SMARCA4-201ENST00000344626 RDM1Q8NG50 284 aa17.68■□□□□ 0.42
SMARCA4-201ENST00000344626 SENP2Q9HC62 589 aa17.68■□□□□ 0.42
SMARCA4-201ENST00000344626 GFPT2O94808 682 aa17.67■□□□□ 0.42
SMARCA4-201ENST00000344626 ARL13BQ3SXY8 428 aa17.67■□□□□ 0.42
SMARCA4-201ENST00000344626 AFG1LQ8WV93 481 aa17.67■□□□□ 0.42
SMARCA4-201ENST00000344626 NCAPGQ9BPX3 1015 aa17.67■□□□□ 0.42
SMARCA4-201ENST00000344626 TRAPPC3O43617 180 aa17.67■□□□□ 0.42
SMARCA4-201ENST00000344626 NLRP11P59045 1033 aaKnown RBP17.67■□□□□ 0.42
SMARCA4-201ENST00000344626 ZBED6P86452 979 aa17.67■□□□□ 0.42
SMARCA4-201ENST00000344626 PRKCEQ02156 737 aa17.67■□□□□ 0.42
SMARCA4-201ENST00000344626 LMNB2Q03252 620 aa17.67■□□□□ 0.42
SMARCA4-201ENST00000344626 TCP11X2Q5H9J9 407 aa17.67■□□□□ 0.42
SMARCA4-201ENST00000344626 KIF12Q96FN5 646 aa17.67■□□□□ 0.42
SMARCA4-201ENST00000344626 SEPT10Q9P0V9 454 aa17.67■□□□□ 0.42
SMARCA4-201ENST00000344626 AKR1A1P14550 325 aa17.67■□□□□ 0.42
SMARCA4-201ENST00000344626 GMCL1Q96IK5 515 aa17.67■□□□□ 0.42
SMARCA4-201ENST00000344626 FAM198AQ9UFP1 575 aa17.67■□□□□ 0.42
SMARCA4-201ENST00000344626 HIP1RO75146 1068 aa17.67■□□□□ 0.42
SMARCA4-201ENST00000344626 EFCAB12Q6NXP0 572 aa17.67■□□□□ 0.42
SMARCA4-201ENST00000344626 ZNF560Q96MR9 790 aa17.67■□□□□ 0.42
SMARCA4-201ENST00000344626 KRIT1O00522 736 aa17.67■□□□□ 0.42
SMARCA4-201ENST00000344626 TBXAS1P24557 533 aaPredicted RBP17.67■□□□□ 0.42
SMARCA4-201ENST00000344626 ZBTB16Q05516 673 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms