RNA–Protein interactions for RNA: ENST00000344586.8

NKX2-3-201, Transcript of NK2 homeobox 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NKX2-3, Length 2,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3-201ENST00000344586 NR2E1Q9Y466 385 aa25.12■■□□□ 1.61
NKX2-3-201ENST00000344586 DDTLA6NHG4 134 aaPredicted RBP25.11■■□□□ 1.61
NKX2-3-201ENST00000344586 TRAPPC3O43617 180 aa25.11■■□□□ 1.61
NKX2-3-201ENST00000344586 HOXA13P31271 388 aaPredicted RBP25.11■■□□□ 1.61
NKX2-3-201ENST00000344586 FMO5P49326 533 aa25.11■■□□□ 1.61
NKX2-3-201ENST00000344586 PPARDQ03181 441 aa25.11■■□□□ 1.61
NKX2-3-201ENST00000344586 ICA1Q05084 483 aa25.11■■□□□ 1.61
NKX2-3-201ENST00000344586 PPATQ06203 517 aa25.11■■□□□ 1.61
NKX2-3-201ENST00000344586 ZC2HC1CQ53FD0 456 aaPredicted RBP25.11■■□□□ 1.61
NKX2-3-201ENST00000344586 TRIM51Q9BSJ1 452 aa25.11■■□□□ 1.61
NKX2-3-201ENST00000344586 LRRC4CQ9HCJ2 640 aa25.11■■□□□ 1.61
NKX2-3-201ENST00000344586 BCCIPQ9P287 314 aaKnown RBP eCLIP25.11■■□□□ 1.61
NKX2-3-201ENST00000344586 DNAJC12Q9UKB3 198 aa25.11■■□□□ 1.61
NKX2-3-201ENST00000344586 UTP11Q9Y3A2 253 aaKnown RBP25.11■■□□□ 1.61
NKX2-3-201ENST00000344586 POLRMTO00411 1230 aaKnown RBP25.11■■□□□ 1.61
NKX2-3-201ENST00000344586 CRKP46108 304 aa25.11■■□□□ 1.61
NKX2-3-201ENST00000344586 PPP2R2AP63151 447 aa25.11■■□□□ 1.61
NKX2-3-201ENST00000344586 TCP10Q12799 353 aa25.11■■□□□ 1.61
NKX2-3-201ENST00000344586 COG2Q14746 738 aa25.11■■□□□ 1.61
NKX2-3-201ENST00000344586 DRAP1Q14919 205 aaPredicted RBP25.11■■□□□ 1.61
NKX2-3-201ENST00000344586 SLC15A2Q16348 729 aa25.11■■□□□ 1.61
NKX2-3-201ENST00000344586 PIGOQ8TEQ8 1089 aa25.11■■□□□ 1.61
NKX2-3-201ENST00000344586 NRXN2Q9P2S2 1712 aa25.11■■□□□ 1.61
NKX2-3-201ENST00000344586 FRMPD4Q14CM0 1322 aa25.11■■□□□ 1.61
NKX2-3-201ENST00000344586 GMNCA6NCL1 334 aa25.1■■□□□ 1.61
NKX2-3-201ENST00000344586 DCDC2CA8MYV0 355 aa25.1■■□□□ 1.61
NKX2-3-201ENST00000344586 FAM13AO94988 1023 aa25.1■■□□□ 1.61
NKX2-3-201ENST00000344586 TMOD1P28289 359 aa25.1■■□□□ 1.61
NKX2-3-201ENST00000344586 DHX9Q08211 1270 aaKnown RBP25.1■■□□□ 1.61
NKX2-3-201ENST00000344586 CTTNQ14247 550 aaKnown RBP25.1■■□□□ 1.61
NKX2-3-201ENST00000344586 SYDE2Q5VT97 1194 aa25.1■■□□□ 1.61
NKX2-3-201ENST00000344586 C3orf20Q8ND61 904 aa25.1■■□□□ 1.61
NKX2-3-201ENST00000344586 TXLNGYQ9BZA5 131 aa25.1■■□□□ 1.61
NKX2-3-201ENST00000344586 NOVA2Q9UNW9 492 aaKnown RBP25.1■■□□□ 1.61
NKX2-3-201ENST00000344586 PCDHAC2Q9Y5I4 1007 aa25.1■■□□□ 1.61
NKX2-3-201ENST00000344586 IGLV3-22A0A075B6J6 115 aa25.09■■□□□ 1.61
NKX2-3-201ENST00000344586 F5H6K3 240 aa25.09■■□□□ 1.61
NKX2-3-201ENST00000344586 NDUFB10O96000 172 aa25.09■■□□□ 1.61
NKX2-3-201ENST00000344586 CYP3A4P08684 503 aa25.09■■□□□ 1.61
NKX2-3-201ENST00000344586 PTENP60484 403 aa25.09■■□□□ 1.61
NKX2-3-201ENST00000344586 KLRC3Q07444 240 aa25.09■■□□□ 1.61
NKX2-3-201ENST00000344586 IFT88Q13099 833 aa25.09■■□□□ 1.61
NKX2-3-201ENST00000344586 RNF187Q5TA31 235 aaPredicted RBP25.09■■□□□ 1.61
NKX2-3-201ENST00000344586 C1orf186Q6ZWK4 172 aa25.09■■□□□ 1.61
NKX2-3-201ENST00000344586 MYCT1Q8N699 235 aa25.09■■□□□ 1.61
NKX2-3-201ENST00000344586 PPP1R12BO60237 982 aaPredicted RBP25.09■■□□□ 1.61
NKX2-3-201ENST00000344586 PAEPP09466 180 aa25.09■■□□□ 1.61
NKX2-3-201ENST00000344586 ABCB4P21439 1286 aa25.09■■□□□ 1.61
NKX2-3-201ENST00000344586 CBWD6Q4V339 395 aa25.09■■□□□ 1.61
NKX2-3-201ENST00000344586 CBWD3Q5JTY5 395 aa25.09■■□□□ 1.61
NKX2-3-201ENST00000344586 CBWD5Q5RIA9 395 aa25.09■■□□□ 1.61
NKX2-3-201ENST00000344586 SH3BP5LQ7L8J4 393 aa25.09■■□□□ 1.61
NKX2-3-201ENST00000344586 KSR1Q8IVT5 923 aa25.09■■□□□ 1.61
NKX2-3-201ENST00000344586 GMCL1P1Q8NEA9 526 aa25.09■■□□□ 1.61
NKX2-3-201ENST00000344586 CTNNBL1Q8WYA6 563 aaPredicted RBP25.09■■□□□ 1.61
NKX2-3-201ENST00000344586 ARHGEF26Q96DR7 871 aa25.09■■□□□ 1.61
NKX2-3-201ENST00000344586 GMCL1Q96IK5 515 aa25.09■■□□□ 1.61
NKX2-3-201ENST00000344586 HSD17B14Q9BPX1 270 aa25.09■■□□□ 1.61
NKX2-3-201ENST00000344586 MKNK1Q9BUB5 465 aa25.09■■□□□ 1.61
NKX2-3-201ENST00000344586 PPFIA2O75334 1257 aa25.08■■□□□ 1.61
NKX2-3-201ENST00000344586 PLS1Q14651 629 aa25.08■■□□□ 1.61
NKX2-3-201ENST00000344586 SLC30A10Q6XR72 485 aa25.08■■□□□ 1.61
NKX2-3-201ENST00000344586 FIZ1Q96SL8 496 aa25.08■■□□□ 1.61
NKX2-3-201ENST00000344586 CEP89Q96ST8 783 aa25.08■■□□□ 1.61
NKX2-3-201ENST00000344586 INTS2Q9H0H0 1204 aaKnown RBP25.08■■□□□ 1.61
NKX2-3-201ENST00000344586 VCPKMTQ9H867 229 aa25.08■■□□□ 1.61
NKX2-3-201ENST00000344586 DIS3Q9Y2L1 958 aaKnown RBP25.08■■□□□ 1.61
NKX2-3-201ENST00000344586 H0YHG0 523 aa25.08■■□□□ 1.6
NKX2-3-201ENST00000344586 MAGOHP61326 146 aaKnown RBP25.08■■□□□ 1.6
NKX2-3-201ENST00000344586 ACTN3Q08043 901 aaPredicted RBP25.08■■□□□ 1.6
NKX2-3-201ENST00000344586 QPCTQ16769 361 aa25.08■■□□□ 1.6
NKX2-3-201ENST00000344586 SWT1Q5T5J6 900 aaKnown RBP25.08■■□□□ 1.6
NKX2-3-201ENST00000344586 TATDN1Q6P1N9 297 aa25.08■■□□□ 1.6
NKX2-3-201ENST00000344586 KCTD17Q8N5Z5 321 aa25.08■■□□□ 1.6
NKX2-3-201ENST00000344586 MAGOHBQ96A72 148 aaKnown RBP25.08■■□□□ 1.6
NKX2-3-201ENST00000344586 ZDHHC15Q96MV8 337 aa25.08■■□□□ 1.6
NKX2-3-201ENST00000344586 TRIM31Q9BZY9 425 aa25.08■■□□□ 1.6
NKX2-3-201ENST00000344586 FAM198AQ9UFP1 575 aa25.08■■□□□ 1.6
NKX2-3-201ENST00000344586 DDX20Q9UHI6 824 aaKnown RBP25.08■■□□□ 1.6
NKX2-3-201ENST00000344586 ZNF76P36508 570 aa25.07■■□□□ 1.6
NKX2-3-201ENST00000344586 IKQ13123 557 aaPredicted RBP25.07■■□□□ 1.6
NKX2-3-201ENST00000344586 KRT71Q3SY84 523 aa25.07■■□□□ 1.6
NKX2-3-201ENST00000344586 ODF2Q5BJF6 829 aa25.07■■□□□ 1.6
NKX2-3-201ENST00000344586 TMEM179Q6ZVK1 233 aa25.07■■□□□ 1.6
NKX2-3-201ENST00000344586 RBBP6Q7Z6E9 1792 aaKnown RBP25.07■■□□□ 1.6
NKX2-3-201ENST00000344586 FMO2Q99518 471 aa25.07■■□□□ 1.6
NKX2-3-201ENST00000344586 WDR18Q9BV38 432 aa25.07■■□□□ 1.6
NKX2-3-201ENST00000344586 RAB17Q9H0T7 212 aa25.07■■□□□ 1.6
NKX2-3-201ENST00000344586 CARD9Q9H257 536 aa25.07■■□□□ 1.6
NKX2-3-201ENST00000344586 PARVGQ9HBI0 331 aa25.07■■□□□ 1.6
NKX2-3-201ENST00000344586 ERVK-5Q9HDB9 667 aa25.07■■□□□ 1.6
NKX2-3-201ENST00000344586 TUFT1Q9NNX1 390 aa25.07■■□□□ 1.6
NKX2-3-201ENST00000344586 TAS2R14Q9NYV8 317 aa25.07■■□□□ 1.6
NKX2-3-201ENST00000344586 PI4KBQ9UBF8 816 aa25.07■■□□□ 1.6
NKX2-3-201ENST00000344586 UBE4BO95155 1302 aa25.06■■□□□ 1.6
NKX2-3-201ENST00000344586 SLITRK3O94933 977 aa25.06■■□□□ 1.6
NKX2-3-201ENST00000344586 TRIM49P0CI25 452 aa25.06■■□□□ 1.6
NKX2-3-201ENST00000344586 TRIM49CP0CI26 452 aa25.06■■□□□ 1.6
NKX2-3-201ENST00000344586 RAPGEF5Q92565 580 aa25.06■■□□□ 1.6
NKX2-3-201ENST00000344586 DYDC2Q96IM9 177 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms