RNA–Protein interactions for RNA: ENST00000344404.10

TRIOBP-202, Transcript of TRIO and F-actin binding protein, humanhuman

TSL 2

Gene TRIOBP, Length 7,300 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-202ENST00000344404 EAF2Q96CJ1 260 aaPredicted RBP13.08□□□□□ -0.32
TRIOBP-202ENST00000344404 RMDN1Q96DB5 314 aa13.08□□□□□ -0.32
TRIOBP-202ENST00000344404 CCDC17Q96LX7 622 aa13.08□□□□□ -0.32
TRIOBP-202ENST00000344404 TESK2Q96S53 571 aa13.08□□□□□ -0.32
TRIOBP-202ENST00000344404 FAM213AQ9BRX8 229 aa13.08□□□□□ -0.32
TRIOBP-202ENST00000344404 PCDHB7Q9Y5E2 793 aa13.08□□□□□ -0.32
TRIOBP-202ENST00000344404 CLDN3O15551 220 aa13.08□□□□□ -0.32
TRIOBP-202ENST00000344404 TBC1D12O60347 775 aa13.08□□□□□ -0.32
TRIOBP-202ENST00000344404 NMT2O60551 498 aa13.08□□□□□ -0.32
TRIOBP-202ENST00000344404 NR5A1Q13285 461 aa13.08□□□□□ -0.32
TRIOBP-202ENST00000344404 ARHGAP18Q8N392 663 aa13.08□□□□□ -0.32
TRIOBP-202ENST00000344404 SPTLC3Q9NUV7 552 aa13.08□□□□□ -0.32
TRIOBP-202ENST00000344404 FGFR1OP2Q9NVK5 253 aa13.08□□□□□ -0.32
TRIOBP-202ENST00000344404 GEMIN8Q9NWZ8 242 aaKnown RBP13.08□□□□□ -0.32
TRIOBP-202ENST00000344404 STX18Q9P2W9 335 aaKnown RBP13.08□□□□□ -0.32
TRIOBP-202ENST00000344404 WARS2Q9UGM6 360 aaKnown RBP13.08□□□□□ -0.32
TRIOBP-202ENST00000344404 TTC7AQ9ULT0 858 aaPredicted RBP13.08□□□□□ -0.32
TRIOBP-202ENST00000344404 NUP153P49790 1475 aaKnown RBP13.08□□□□□ -0.32
TRIOBP-202ENST00000344404 SPDYE5A6NIY4 337 aa13.08□□□□□ -0.32
TRIOBP-202ENST00000344404 TAC1P20366 129 aa13.08□□□□□ -0.32
TRIOBP-202ENST00000344404 PRKCQQ04759 706 aa13.08□□□□□ -0.32
TRIOBP-202ENST00000344404 SPDYE7PQ495Y7 208 aa13.08□□□□□ -0.32
TRIOBP-202ENST00000344404 TADA2BQ86TJ2 420 aa13.08□□□□□ -0.32
TRIOBP-202ENST00000344404 ENTPD7Q9NQZ7 604 aa13.08□□□□□ -0.32
TRIOBP-202ENST00000344404 SCOCQ9UIL1 159 aa13.08□□□□□ -0.32
TRIOBP-202ENST00000344404 TRAF3IP3Q9Y228 551 aa13.08□□□□□ -0.32
TRIOBP-202ENST00000344404 USP17L10C9JJH3 530 aa13.08□□□□□ -0.32
TRIOBP-202ENST00000344404 APOA4P06727 396 aa13.08□□□□□ -0.32
TRIOBP-202ENST00000344404 SF3B3Q15393 1217 aaKnown RBP13.08□□□□□ -0.32
TRIOBP-202ENST00000344404 ZNF699Q32M78 642 aa13.08□□□□□ -0.32
TRIOBP-202ENST00000344404 LRRC31Q6UY01 552 aa13.08□□□□□ -0.32
TRIOBP-202ENST00000344404 SLC44A5Q8NCS7 719 aa13.08□□□□□ -0.32
TRIOBP-202ENST00000344404 OSBPL10Q9BXB5 764 aa13.08□□□□□ -0.32
TRIOBP-202ENST00000344404 COA1Q9GZY4 146 aa13.08□□□□□ -0.32
TRIOBP-202ENST00000344404 PATL1Q86TB9 770 aaKnown RBP13.07□□□□□ -0.32
TRIOBP-202ENST00000344404 PYROXD1Q8WU10 500 aa13.07□□□□□ -0.32
TRIOBP-202ENST00000344404 DHX38Q92620 1227 aaKnown RBP13.07□□□□□ -0.32
TRIOBP-202ENST00000344404 TTC17Q96AE7 1141 aa13.07□□□□□ -0.32
TRIOBP-202ENST00000344404 ZFP42Q96MM3 310 aa13.07□□□□□ -0.32
TRIOBP-202ENST00000344404 SUN2Q9UH99 717 aa13.07□□□□□ -0.32
TRIOBP-202ENST00000344404 PCDHA5Q9Y5H7 936 aa13.07□□□□□ -0.32
TRIOBP-202ENST00000344404 KRT87PA6NCN2 255 aa13.07□□□□□ -0.32
TRIOBP-202ENST00000344404 ECEL1O95672 775 aa13.07□□□□□ -0.32
TRIOBP-202ENST00000344404 ASNSP08243 561 aa13.07□□□□□ -0.32
TRIOBP-202ENST00000344404 PPP3CCP48454 512 aa13.07□□□□□ -0.32
TRIOBP-202ENST00000344404 LMNB2Q03252 620 aa13.07□□□□□ -0.32
TRIOBP-202ENST00000344404 IFT88Q13099 833 aa13.07□□□□□ -0.32
TRIOBP-202ENST00000344404 SEPT5Q99719 369 aaPredicted RBP13.07□□□□□ -0.32
TRIOBP-202ENST00000344404 SH2D3AQ9BRG2 576 aa13.07□□□□□ -0.32
TRIOBP-202ENST00000344404 WDR11Q9BZH6 1224 aa13.07□□□□□ -0.32
TRIOBP-202ENST00000344404 TRIM15Q9C019 465 aa13.07□□□□□ -0.32
TRIOBP-202ENST00000344404 TRIM45Q9H8W5 580 aaPredicted RBP13.07□□□□□ -0.32
TRIOBP-202ENST00000344404 DYNC1LI2O43237 492 aaPredicted RBP13.07□□□□□ -0.32
TRIOBP-202ENST00000344404 ORC4O43929 436 aa13.07□□□□□ -0.32
TRIOBP-202ENST00000344404 SUN1O94901 812 aa13.07□□□□□ -0.32
TRIOBP-202ENST00000344404 GRAMD1BQ3KR37 738 aa13.07□□□□□ -0.32
TRIOBP-202ENST00000344404 TCP11Q8WWU5 503 aa13.07□□□□□ -0.32
TRIOBP-202ENST00000344404 UGGT2Q9NYU1 1516 aa13.07□□□□□ -0.32
TRIOBP-202ENST00000344404 ARHGAP10A1A4S6 786 aa13.07□□□□□ -0.32
TRIOBP-202ENST00000344404 EIF3CLB5ME19 914 aaKnown RBP13.07□□□□□ -0.32
TRIOBP-202ENST00000344404 SERPINI2O75830 405 aa13.07□□□□□ -0.32
TRIOBP-202ENST00000344404 SNCBQ16143 134 aa13.07□□□□□ -0.32
TRIOBP-202ENST00000344404 BRINP3Q76B58 766 aa13.07□□□□□ -0.32
TRIOBP-202ENST00000344404 CDHR1Q96JP9 859 aa13.07□□□□□ -0.32
TRIOBP-202ENST00000344404 EIF3CQ99613 913 aaKnown RBP13.07□□□□□ -0.32
TRIOBP-202ENST00000344404 PCDHA7Q9UN72 937 aa13.07□□□□□ -0.32
TRIOBP-202ENST00000344404 EPN1Q9Y6I3 576 aaPredicted RBP13.07□□□□□ -0.32
TRIOBP-202ENST00000344404 SEC31AO94979 1220 aaKnown RBP13.07□□□□□ -0.32
TRIOBP-202ENST00000344404 COBLL1Q53SF7 1204 aa13.07□□□□□ -0.32
TRIOBP-202ENST00000344404 THEGQ9P2T0 379 aa13.07□□□□□ -0.32
TRIOBP-202ENST00000344404 PIN4Q9Y237 131 aaKnown RBP13.07□□□□□ -0.32
TRIOBP-202ENST00000344404 EXOC1LA0A1B0GW35 172 aa13.07□□□□□ -0.32
TRIOBP-202ENST00000344404 GPC3P51654 580 aa13.07□□□□□ -0.32
TRIOBP-202ENST00000344404 RFX8Q6ZV50 586 aa13.07□□□□□ -0.32
TRIOBP-202ENST00000344404 TMEM206Q9H813 350 aa13.07□□□□□ -0.32
TRIOBP-202ENST00000344404 GRIN3BO60391 1043 aa13.06□□□□□ -0.32
TRIOBP-202ENST00000344404 POLE2P56282 527 aa13.06□□□□□ -0.32
TRIOBP-202ENST00000344404 BCAS4Q8TDM0 211 aa13.06□□□□□ -0.32
TRIOBP-202ENST00000344404 VPS11Q9H270 941 aa13.06□□□□□ -0.32
TRIOBP-202ENST00000344404 MCF2P10911 925 aa13.06□□□□□ -0.32
TRIOBP-202ENST00000344404 MAP2K2P36507 400 aa13.06□□□□□ -0.32
TRIOBP-202ENST00000344404 LVRNQ6Q4G3 990 aa13.06□□□□□ -0.32
TRIOBP-202ENST00000344404 SLC35F6Q8N357 371 aa13.06□□□□□ -0.32
TRIOBP-202ENST00000344404 ENOX1Q8TC92 643 aaKnown RBP13.06□□□□□ -0.32
TRIOBP-202ENST00000344404 KLHL29Q96CT2 875 aa13.06□□□□□ -0.32
TRIOBP-202ENST00000344404 PUS7LQ9H0K6 701 aaKnown RBP13.06□□□□□ -0.32
TRIOBP-202ENST00000344404 MRPL47Q9HD33 250 aaKnown RBP13.06□□□□□ -0.32
TRIOBP-202ENST00000344404 PJA2O43164 708 aa13.06□□□□□ -0.32
TRIOBP-202ENST00000344404 DIAPH2O60879 1101 aa13.06□□□□□ -0.32
TRIOBP-202ENST00000344404 MXI1P50539 228 aa13.06□□□□□ -0.32
TRIOBP-202ENST00000344404 ZNF667Q5HYK9 610 aa13.06□□□□□ -0.32
TRIOBP-202ENST00000344404 ANKS3Q6ZW76 656 aa13.06□□□□□ -0.32
TRIOBP-202ENST00000344404 DEFB128Q7Z7B8 93 aa13.06□□□□□ -0.32
TRIOBP-202ENST00000344404 ING2Q9H160 280 aa13.06□□□□□ -0.32
TRIOBP-202ENST00000344404 ZNF302Q9NR11 478 aa13.06□□□□□ -0.32
TRIOBP-202ENST00000344404 PACSIN2Q9UNF0 486 aaPredicted RBP13.06□□□□□ -0.32
TRIOBP-202ENST00000344404 CFAP74Q9C0B2 1584 aa13.06□□□□□ -0.32
TRIOBP-202ENST00000344404 ABCC2Q92887 1545 aa13.06□□□□□ -0.32
TRIOBP-202ENST00000344404 LRRC53A6NM62 1247 aa13.06□□□□□ -0.32
TRIOBP-202ENST00000344404 VCAM1P19320 739 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms