RNA–Protein interactions for RNA: ENST00000344129.2

CT55-202, Transcript of cancer/testis antigen 55, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CT55, Length 1,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CT55-202ENST00000344129 EIF3DO15371 548 aaKnown RBP eCLIP13.99□□□□□ -0.17
CT55-202ENST00000344129 HBP1O60381 514 aa13.99□□□□□ -0.17
CT55-202ENST00000344129 FKTNO75072 461 aa13.99□□□□□ -0.17
CT55-202ENST00000344129 AKR1A1P14550 325 aa13.99□□□□□ -0.17
CT55-202ENST00000344129 RFC5P40937 340 aa13.99□□□□□ -0.17
CT55-202ENST00000344129 NPTX2P47972 431 aa13.99□□□□□ -0.17
CT55-202ENST00000344129 CACNB2Q08289 660 aaPredicted RBP13.99□□□□□ -0.17
CT55-202ENST00000344129 TBC1D8BQ0IIM8 1120 aa13.99□□□□□ -0.17
CT55-202ENST00000344129 DRP2Q13474 957 aa13.99□□□□□ -0.17
CT55-202ENST00000344129 KCNJ12Q14500 433 aa13.99□□□□□ -0.17
CT55-202ENST00000344129 PTPN21Q16825 1174 aa13.99□□□□□ -0.17
CT55-202ENST00000344129 KNOP1Q1ED39 458 aaKnown RBP13.99□□□□□ -0.17
CT55-202ENST00000344129 BMT2Q1RMZ1 405 aa13.99□□□□□ -0.17
CT55-202ENST00000344129 ZCWPW2Q504Y3 356 aa13.99□□□□□ -0.17
CT55-202ENST00000344129 IRF2BP1Q8IU81 584 aa13.99□□□□□ -0.17
CT55-202ENST00000344129 SPC24Q8NBT2 197 aa13.99□□□□□ -0.17
CT55-202ENST00000344129 ASAP3Q8TDY4 903 aa13.99□□□□□ -0.17
CT55-202ENST00000344129 SUGCTQ9HAC7 445 aa13.99□□□□□ -0.17
CT55-202ENST00000344129 ZMYM2Q9UBW7 1377 aa13.99□□□□□ -0.17
CT55-202ENST00000344129 A6NJR5 290 aa13.98□□□□□ -0.17
CT55-202ENST00000344129 H3BRB1 525 aa13.98□□□□□ -0.17
CT55-202ENST00000344129 ADCY3O60266 1144 aa13.98□□□□□ -0.17
CT55-202ENST00000344129 MAFO75444 373 aaPredicted RBP13.98□□□□□ -0.17
CT55-202ENST00000344129 HOXD8P13378 290 aaPredicted RBP13.98□□□□□ -0.17
CT55-202ENST00000344129 INSRRP14616 1297 aa13.98□□□□□ -0.17
CT55-202ENST00000344129 HOXD10P28358 340 aa13.98□□□□□ -0.17
CT55-202ENST00000344129 UBASH3AP57075 661 aa13.98□□□□□ -0.17
CT55-202ENST00000344129 LRRC63Q05C16 580 aa13.98□□□□□ -0.17
CT55-202ENST00000344129 DMP1Q13316 513 aaPredicted RBP13.98□□□□□ -0.17
CT55-202ENST00000344129 HAUS6Q7Z4H7 955 aa13.98□□□□□ -0.17
CT55-202ENST00000344129 LRRC71Q8N4P6 559 aa13.98□□□□□ -0.17
CT55-202ENST00000344129 RAET1EQ8TD07 263 aa13.98□□□□□ -0.17
CT55-202ENST00000344129 ERO1AQ96HE7 468 aa13.98□□□□□ -0.17
CT55-202ENST00000344129 THAP9Q9H5L6 903 aa13.98□□□□□ -0.17
CT55-202ENST00000344129 TUT1Q9H6E5 874 aaKnown RBP13.98□□□□□ -0.17
CT55-202ENST00000344129 KMT5AQ9NQR1 393 aa13.98□□□□□ -0.17
CT55-202ENST00000344129 SAGE1Q9NXZ1 904 aa13.98□□□□□ -0.17
CT55-202ENST00000344129 ZNF215Q9UL58 517 aaPredicted RBP13.98□□□□□ -0.17
CT55-202ENST00000344129 PCDHB13Q9Y5F0 798 aa13.98□□□□□ -0.17
CT55-202ENST00000344129 MYL3P08590 195 aa13.98□□□□□ -0.17
CT55-202ENST00000344129 PRKAR2AP13861 404 aaKnown RBP13.98□□□□□ -0.17
CT55-202ENST00000344129 CCND3P30281 292 aaPredicted RBP13.98□□□□□ -0.17
CT55-202ENST00000344129 NCKAP1LP55160 1127 aa13.98□□□□□ -0.17
CT55-202ENST00000344129 KRT31Q15323 416 aa13.98□□□□□ -0.17
CT55-202ENST00000344129 TCP11X2Q5H9J9 407 aa13.98□□□□□ -0.17
CT55-202ENST00000344129 LRRC55Q6ZSA7 311 aa13.98□□□□□ -0.17
CT55-202ENST00000344129 STXBP4Q6ZWJ1 553 aa13.98□□□□□ -0.17
CT55-202ENST00000344129 DRC7Q8IY82 874 aa13.98□□□□□ -0.17
CT55-202ENST00000344129 NOC3LQ8WTT2 800 aaKnown RBP13.98□□□□□ -0.17
CT55-202ENST00000344129 IFT74Q96LB3 600 aa13.98□□□□□ -0.17
CT55-202ENST00000344129 STRA6Q9BX79 667 aa13.98□□□□□ -0.17
CT55-202ENST00000344129 TAB2Q9NYJ8 693 aa13.98□□□□□ -0.17
CT55-202ENST00000344129 NRBP1Q9UHY1 535 aa13.98□□□□□ -0.17
CT55-202ENST00000344129 CASP8AP2Q9UKL3 1982 aa13.98□□□□□ -0.17
CT55-202ENST00000344129 MYADML2A6NDP7 307 aa13.97□□□□□ -0.17
CT55-202ENST00000344129 CLIC2O15247 247 aa13.97□□□□□ -0.17
CT55-202ENST00000344129 PPP1R37O75864 691 aa13.97□□□□□ -0.17
CT55-202ENST00000344129 MAPTP10636 758 aaKnown RBP13.97□□□□□ -0.17
CT55-202ENST00000344129 HSPA6P17066 643 aa13.97□□□□□ -0.17
CT55-202ENST00000344129 GLRA2P23416 452 aa13.97□□□□□ -0.17
CT55-202ENST00000344129 ARL2P36404 184 aa13.97□□□□□ -0.17
CT55-202ENST00000344129 SMTNP53814 917 aa13.97□□□□□ -0.17
CT55-202ENST00000344129 MKRN4PQ13434 485 aaPredicted RBP13.97□□□□□ -0.17
CT55-202ENST00000344129 APTXQ7Z2E3 356 aaKnown RBP13.97□□□□□ -0.17
CT55-202ENST00000344129 TMEM161BQ8NDZ6 487 aa13.97□□□□□ -0.17
CT55-202ENST00000344129 MRFAP1L1Q96HT8 127 aa13.97□□□□□ -0.17
CT55-202ENST00000344129 CNOT6LQ96LI5 555 aaKnown RBP13.97□□□□□ -0.17
CT55-202ENST00000344129 VPS16Q9H269 839 aa13.97□□□□□ -0.17
CT55-202ENST00000344129 INTS13Q9NVM9 706 aa13.97□□□□□ -0.17
CT55-202ENST00000344129 MAGEC2Q9UBF1 373 aaPredicted RBP13.97□□□□□ -0.17
CT55-202ENST00000344129 LIMA1Q9UHB6 759 aaKnown RBP13.97□□□□□ -0.17
CT55-202ENST00000344129 UBE4BO95155 1302 aa13.97□□□□□ -0.17
CT55-202ENST00000344129 ADGRA3Q8IWK6 1321 aa13.97□□□□□ -0.17
CT55-202ENST00000344129 PDXKO00764 312 aa13.96□□□□□ -0.17
CT55-202ENST00000344129 TGFB1I1O43294 461 aa13.96□□□□□ -0.17
CT55-202ENST00000344129 CALUO43852 315 aaPredicted RBP13.96□□□□□ -0.17
CT55-202ENST00000344129 DUSP11O75319 330 aaKnown RBP13.96□□□□□ -0.17
CT55-202ENST00000344129 C6orf222P0C671 652 aaPredicted RBP13.96□□□□□ -0.17
CT55-202ENST00000344129 CPT1AP50416 773 aa13.96□□□□□ -0.17
CT55-202ENST00000344129 CLCN3P51790 818 aa13.96□□□□□ -0.17
CT55-202ENST00000344129 RTP1P59025 263 aa13.96□□□□□ -0.17
CT55-202ENST00000344129 FSCN1Q16658 493 aaKnown RBP13.96□□□□□ -0.17
CT55-202ENST00000344129 ZNF484Q5JVG2 852 aa13.96□□□□□ -0.17
CT55-202ENST00000344129 SYCP3Q8IZU3 236 aa13.96□□□□□ -0.17
CT55-202ENST00000344129 METTL13Q8N6R0 699 aa13.96□□□□□ -0.17
CT55-202ENST00000344129 SPIRE2Q8WWL2 714 aa13.96□□□□□ -0.17
CT55-202ENST00000344129 KAT2BQ92831 832 aa13.96□□□□□ -0.17
CT55-202ENST00000344129 ACCSQ96QU6 501 aa13.96□□□□□ -0.17
CT55-202ENST00000344129 C17orf75Q9HAS0 396 aa13.96□□□□□ -0.17
CT55-202ENST00000344129 TYW1Q9NV66 732 aaKnown RBP13.96□□□□□ -0.17
CT55-202ENST00000344129 Q9Y3F1 56 aa13.96□□□□□ -0.17
CT55-202ENST00000344129 PPME1Q9Y570 386 aa13.96□□□□□ -0.17
CT55-202ENST00000344129 DENND3A2RUS2 1198 aa13.95□□□□□ -0.18
CT55-202ENST00000344129 LRRIQ4A6NIV6 560 aa13.95□□□□□ -0.18
CT55-202ENST00000344129 TISP43B9A030 160 aa13.95□□□□□ -0.18
CT55-202ENST00000344129 SEPT4O43236 478 aa13.95□□□□□ -0.18
CT55-202ENST00000344129 CBFA2T2O43439 604 aa13.95□□□□□ -0.18
CT55-202ENST00000344129 C22orf31O95567 290 aa13.95□□□□□ -0.18
CT55-202ENST00000344129 PGK1P00558 417 aa13.95□□□□□ -0.18
CT55-202ENST00000344129 GJB1P08034 283 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms