RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 SLC1A4P43007 532 aa8.18□□□□□ -1.1
ZNF540-202ENST00000343599 STARD6P59095 220 aa8.18□□□□□ -1.1
ZNF540-202ENST00000343599 ZNF513Q8N8E2 541 aaPredicted RBP8.18□□□□□ -1.1
ZNF540-202ENST00000343599 PRDM12Q9H4Q4 367 aa8.18□□□□□ -1.1
ZNF540-202ENST00000343599 TRPV4Q9HBA0 871 aa8.18□□□□□ -1.1
ZNF540-202ENST00000343599 KCND1Q9NSA2 647 aa8.18□□□□□ -1.1
ZNF540-202ENST00000343599 PNMA6FA0A0J9YX94 578 aa8.18□□□□□ -1.1
ZNF540-202ENST00000343599 RSPH10B2B2RC85 870 aa8.18□□□□□ -1.1
ZNF540-202ENST00000343599 GPAA1O43292 621 aa8.18□□□□□ -1.1
ZNF540-202ENST00000343599 FGF19O95750 216 aa8.18□□□□□ -1.1
ZNF540-202ENST00000343599 HNRNPA1P09651 372 aaKnown RBP eCLIP8.18□□□□□ -1.1
ZNF540-202ENST00000343599 RSPH10BP0C881 870 aa8.18□□□□□ -1.1
ZNF540-202ENST00000343599 TAL1P17542 331 aaPredicted RBP8.18□□□□□ -1.1
ZNF540-202ENST00000343599 LIFRP42702 1097 aa8.18□□□□□ -1.1
ZNF540-202ENST00000343599 GPM6BQ13491 265 aa8.18□□□□□ -1.1
ZNF540-202ENST00000343599 PUM1Q14671 1186 aaKnown RBP eCLIP8.18□□□□□ -1.1
ZNF540-202ENST00000343599 MCMDC2Q4G0Z9 681 aa8.18□□□□□ -1.1
ZNF540-202ENST00000343599 IER5Q5VY09 327 aa8.18□□□□□ -1.1
ZNF540-202ENST00000343599 CRYGNQ8WXF5 182 aa8.18□□□□□ -1.1
ZNF540-202ENST00000343599 MRPS27Q92552 414 aaKnown RBP8.18□□□□□ -1.1
ZNF540-202ENST00000343599 NEK1Q96PY6 1258 aa8.18□□□□□ -1.1
ZNF540-202ENST00000343599 IL17RBQ9NRM6 502 aa8.18□□□□□ -1.1
ZNF540-202ENST00000343599 DUSP12Q9UNI6 340 aa8.18□□□□□ -1.1
ZNF540-202ENST00000343599 ZBTB5O15062 677 aa8.17□□□□□ -1.1
ZNF540-202ENST00000343599 ABCD1P33897 745 aa8.17□□□□□ -1.1
ZNF540-202ENST00000343599 LTBRP36941 435 aa8.17□□□□□ -1.1
ZNF540-202ENST00000343599 DDX53Q86TM3 631 aaKnown RBP8.17□□□□□ -1.1
ZNF540-202ENST00000343599 PBXIP1Q96AQ6 731 aa8.17□□□□□ -1.1
ZNF540-202ENST00000343599 CLDN23Q96B33 292 aa8.17□□□□□ -1.1
ZNF540-202ENST00000343599 L2HGDHQ9H9P8 463 aa8.17□□□□□ -1.1
ZNF540-202ENST00000343599 KANSL3Q9P2N6 904 aa8.17□□□□□ -1.1
ZNF540-202ENST00000343599 IDH1O75874 414 aaKnown RBP8.17□□□□□ -1.1
ZNF540-202ENST00000343599 NUCB1Q02818 461 aa8.17□□□□□ -1.1
ZNF540-202ENST00000343599 SMC1AQ14683 1233 aaKnown RBP8.17□□□□□ -1.1
ZNF540-202ENST00000343599 SEC23AQ15436 765 aa8.17□□□□□ -1.1
ZNF540-202ENST00000343599 ZRSR1Q15695 479 aaKnown RBP8.17□□□□□ -1.1
ZNF540-202ENST00000343599 TPD52L1Q16890 204 aaPredicted RBP8.17□□□□□ -1.1
ZNF540-202ENST00000343599 TMEM87AQ8NBN3 555 aa8.17□□□□□ -1.1
ZNF540-202ENST00000343599 PDCD2LQ9BRP1 358 aa8.17□□□□□ -1.1
ZNF540-202ENST00000343599 EPC1Q9H2F5 836 aa8.17□□□□□ -1.1
ZNF540-202ENST00000343599 ETAA1Q9NY74 926 aa8.17□□□□□ -1.1
ZNF540-202ENST00000343599 RIPK3Q9Y572 518 aa8.17□□□□□ -1.1
ZNF540-202ENST00000343599 OAS2P29728 719 aaKnown RBP8.16□□□□□ -1.1
ZNF540-202ENST00000343599 CRYBB1P53674 252 aaPredicted RBP8.16□□□□□ -1.1
ZNF540-202ENST00000343599 MRPS6P82932 125 aaKnown RBP8.16□□□□□ -1.1
ZNF540-202ENST00000343599 ADCY2Q08462 1091 aa8.16□□□□□ -1.1
ZNF540-202ENST00000343599 HYAL1Q12794 435 aa8.16□□□□□ -1.1
ZNF540-202ENST00000343599 TCF15Q12870 199 aa8.16□□□□□ -1.1
ZNF540-202ENST00000343599 FBXO47Q5MNV8 452 aa8.16□□□□□ -1.1
ZNF540-202ENST00000343599 TMEM87BQ96K49 555 aa8.16□□□□□ -1.1
ZNF540-202ENST00000343599 FBXL18Q96ME1 805 aa8.16□□□□□ -1.1
ZNF540-202ENST00000343599 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.16□□□□□ -1.1
ZNF540-202ENST00000343599 GPR182O15218 404 aa8.16□□□□□ -1.1
ZNF540-202ENST00000343599 MX1P20591 662 aa8.16□□□□□ -1.1
ZNF540-202ENST00000343599 FOXD4Q12950 439 aaPredicted RBP8.16□□□□□ -1.1
ZNF540-202ENST00000343599 ZNF746Q6NUN9 644 aaPredicted RBP8.16□□□□□ -1.1
ZNF540-202ENST00000343599 MIGA1Q8NAN2 632 aa8.16□□□□□ -1.1
ZNF540-202ENST00000343599 PAIP2Q9BPZ3 127 aaKnown RBP8.16□□□□□ -1.1
ZNF540-202ENST00000343599 NUCKS1Q9H1E3 243 aaKnown RBP8.16□□□□□ -1.1
ZNF540-202ENST00000343599 SFXN1Q9H9B4 322 aa8.16□□□□□ -1.1
ZNF540-202ENST00000343599 PRDM5Q9NQX1 630 aaPredicted RBP8.16□□□□□ -1.1
ZNF540-202ENST00000343599 IQSEC3Q9UPP2 1182 aaPredicted RBP8.16□□□□□ -1.1
ZNF540-202ENST00000343599 TSC2P49815 1807 aa8.16□□□□□ -1.1
ZNF540-202ENST00000343599 FOXP2O15409 715 aa8.16□□□□□ -1.1
ZNF540-202ENST00000343599 PGK1P00558 417 aa8.16□□□□□ -1.1
ZNF540-202ENST00000343599 HOXA13P31271 388 aaPredicted RBP8.16□□□□□ -1.1
ZNF540-202ENST00000343599 NRLP54845 237 aa8.16□□□□□ -1.1
ZNF540-202ENST00000343599 PGM5Q15124 567 aa8.16□□□□□ -1.1
ZNF540-202ENST00000343599 AMHR2Q16671 573 aa8.16□□□□□ -1.1
ZNF540-202ENST00000343599 GDF6Q6KF10 455 aaPredicted RBP8.16□□□□□ -1.1
ZNF540-202ENST00000343599 LEKR1Q6ZMV7 388 aa8.16□□□□□ -1.1
ZNF540-202ENST00000343599 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.16□□□□□ -1.1
ZNF540-202ENST00000343599 TADA2BQ86TJ2 420 aa8.16□□□□□ -1.1
ZNF540-202ENST00000343599 SHDQ96IW2 340 aa8.16□□□□□ -1.1
ZNF540-202ENST00000343599 RYDENQ9NUL5 291 aaKnown RBP8.16□□□□□ -1.1
ZNF540-202ENST00000343599 ARGLU1Q9NWB6 273 aaPredicted RBP8.16□□□□□ -1.1
ZNF540-202ENST00000343599 ERAP1Q9NZ08 941 aa8.16□□□□□ -1.1
ZNF540-202ENST00000343599 DKK4Q9UBT3 224 aa8.16□□□□□ -1.1
ZNF540-202ENST00000343599 ADAM21Q9UKJ8 722 aa8.16□□□□□ -1.1
ZNF540-202ENST00000343599 A0A087WUV0 522 aaPredicted RBP8.15□□□□□ -1.1
ZNF540-202ENST00000343599 LILRB3O75022 631 aa8.15□□□□□ -1.1
ZNF540-202ENST00000343599 CA3P07451 260 aa8.15□□□□□ -1.1
ZNF540-202ENST00000343599 AOC1P19801 751 aa8.15□□□□□ -1.1
ZNF540-202ENST00000343599 CYP2C18P33260 490 aa8.15□□□□□ -1.1
ZNF540-202ENST00000343599 USP8P40818 1118 aa8.15□□□□□ -1.1
ZNF540-202ENST00000343599 TMCO3Q6UWJ1 677 aa8.15□□□□□ -1.1
ZNF540-202ENST00000343599 TBC1D9Q6ZT07 1266 aa8.15□□□□□ -1.1
ZNF540-202ENST00000343599 C7orf31Q8N865 590 aa8.15□□□□□ -1.1
ZNF540-202ENST00000343599 SPC24Q8NBT2 197 aa8.15□□□□□ -1.1
ZNF540-202ENST00000343599 DAGLBQ8NCG7 672 aa8.15□□□□□ -1.1
ZNF540-202ENST00000343599 SPPL3Q8TCT6 385 aa8.15□□□□□ -1.1
ZNF540-202ENST00000343599 AFG1LQ8WV93 481 aa8.15□□□□□ -1.1
ZNF540-202ENST00000343599 ERCC4Q92889 916 aaPredicted RBP8.15□□□□□ -1.1
ZNF540-202ENST00000343599 NIFKQ9BYG3 293 aaKnown RBP8.15□□□□□ -1.1
ZNF540-202ENST00000343599 INO80BQ9C086 356 aaPredicted RBP8.15□□□□□ -1.1
ZNF540-202ENST00000343599 CYP3A7-CYP3A51PA0A087WV96 503 aa8.15□□□□□ -1.11
ZNF540-202ENST00000343599 ASAP2O43150 1006 aa8.15□□□□□ -1.11
ZNF540-202ENST00000343599 NEFHP12036 1026 aa8.15□□□□□ -1.11
ZNF540-202ENST00000343599 CYP3A7P24462 503 aa8.15□□□□□ -1.11
ZNF540-202ENST00000343599 EVCP57679 992 aa8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms