RNA–Protein interactions for RNA: ENST00000342690.4

RBM38-201, Transcript of RNA binding motif protein 38, humanhuman

TSL 3

Gene RBM38, Length 852 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM38-201ENST00000342690 AKT3Q9Y243 479 aa24.41■■□□□ 1.5
RBM38-201ENST00000342690 PRPF40AO75400 957 aaKnown RBP24.4■■□□□ 1.5
RBM38-201ENST00000342690 DGAT1O75907 488 aa24.4■■□□□ 1.5
RBM38-201ENST00000342690 PARNO95453 639 aaKnown RBP24.4■■□□□ 1.5
RBM38-201ENST00000342690 ACRP10323 421 aa24.4■■□□□ 1.5
RBM38-201ENST00000342690 IER5Q5VY09 327 aa24.4■■□□□ 1.5
RBM38-201ENST00000342690 CHRDL2Q6WN34 429 aa24.4■■□□□ 1.5
RBM38-201ENST00000342690 IQUBQ8NA54 791 aa24.4■■□□□ 1.5
RBM38-201ENST00000342690 LARP4BQ92615 738 aaKnown RBP24.4■■□□□ 1.5
RBM38-201ENST00000342690 RAD54LQ92698 747 aa24.4■■□□□ 1.5
RBM38-201ENST00000342690 ATP6V0A4Q9HBG4 840 aa24.4■■□□□ 1.5
RBM38-201ENST00000342690 A0A087X0B3 334 aa24.39■■□□□ 1.49
RBM38-201ENST00000342690 M0QZ92 97 aa24.39■■□□□ 1.49
RBM38-201ENST00000342690 POLR2DO15514 142 aaKnown RBP24.39■■□□□ 1.49
RBM38-201ENST00000342690 GAS2O43903 313 aaKnown RBP24.39■■□□□ 1.49
RBM38-201ENST00000342690 SSBP05455 408 aaKnown RBP eCLIP24.39■■□□□ 1.49
RBM38-201ENST00000342690 PLA2G4BP0C869 781 aa24.39■■□□□ 1.49
RBM38-201ENST00000342690 UBE2HP62256 183 aa24.39■■□□□ 1.49
RBM38-201ENST00000342690 PADI6Q6TGC4 694 aa24.39■■□□□ 1.49
RBM38-201ENST00000342690 C16orf59Q7L2K0 433 aa24.39■■□□□ 1.49
RBM38-201ENST00000342690 TMEM143Q96AN5 459 aa24.39■■□□□ 1.49
RBM38-201ENST00000342690 DHX58Q96C10 678 aa24.39■■□□□ 1.49
RBM38-201ENST00000342690 CELF4Q9BZC1 486 aaKnown RBP24.39■■□□□ 1.49
RBM38-201ENST00000342690 UBE2OQ9C0C9 1292 aaKnown RBP24.39■■□□□ 1.49
RBM38-201ENST00000342690 PRO3102Q9H379 93 aa24.39■■□□□ 1.49
RBM38-201ENST00000342690 CUEDC2Q9H467 287 aa24.39■■□□□ 1.49
RBM38-201ENST00000342690 HPSEQ9Y251 543 aa24.39■■□□□ 1.49
RBM38-201ENST00000342690 FAM237AA0A1B0GTK4 181 aa24.38■■□□□ 1.49
RBM38-201ENST00000342690 GPR32O75388 356 aa24.38■■□□□ 1.49
RBM38-201ENST00000342690 CXCL10P02778 98 aa24.38■■□□□ 1.49
RBM38-201ENST00000342690 BMP8BP34820 402 aa24.38■■□□□ 1.49
RBM38-201ENST00000342690 SYKP43405 635 aa24.38■■□□□ 1.49
RBM38-201ENST00000342690 DNM2P50570 870 aa24.38■■□□□ 1.49
RBM38-201ENST00000342690 NDUFA8P51970 172 aa24.38■■□□□ 1.49
RBM38-201ENST00000342690 KIZQ2M2Z5 673 aa24.38■■□□□ 1.49
RBM38-201ENST00000342690 RPUSD2Q8IZ73 545 aaKnown RBP24.38■■□□□ 1.49
RBM38-201ENST00000342690 SYT2Q8N9I0 419 aaPredicted RBP24.38■■□□□ 1.49
RBM38-201ENST00000342690 GOLPH3LQ9H4A5 285 aa24.38■■□□□ 1.49
RBM38-201ENST00000342690 CDHR5Q9HBB8 845 aa24.38■■□□□ 1.49
RBM38-201ENST00000342690 BLOC1S4Q9NUP1 217 aa24.38■■□□□ 1.49
RBM38-201ENST00000342690 SUCLA2Q9P2R7 463 aaPredicted RBP24.38■■□□□ 1.49
RBM38-201ENST00000342690 USP25Q9UHP3 1055 aa24.38■■□□□ 1.49
RBM38-201ENST00000342690 GADD45BO75293 160 aaPredicted RBP24.37■■□□□ 1.49
RBM38-201ENST00000342690 GHRP10912 638 aa24.37■■□□□ 1.49
RBM38-201ENST00000342690 GPC3P51654 580 aa24.37■■□□□ 1.49
RBM38-201ENST00000342690 ZNF668Q96K58 619 aaPredicted RBP24.37■■□□□ 1.49
RBM38-201ENST00000342690 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.37■■□□□ 1.491e-7■■■□□ 18.5
RBM38-201ENST00000342690 ADAMTS10Q9H324 1103 aa24.37■■□□□ 1.49
RBM38-201ENST00000342690 GINS2Q9Y248 185 aa24.37■■□□□ 1.49
RBM38-201ENST00000342690 CEP290O15078 2479 aa24.37■■□□□ 1.49
RBM38-201ENST00000342690 TET1Q8NFU7 2136 aa24.37■■□□□ 1.49
RBM38-201ENST00000342690 PFKMP08237 780 aa24.36■■□□□ 1.49
RBM38-201ENST00000342690 CYP11B2P19099 503 aa24.36■■□□□ 1.49
RBM38-201ENST00000342690 NLRP11P59045 1033 aaKnown RBP24.36■■□□□ 1.49
RBM38-201ENST00000342690 DHX8Q14562 1220 aaKnown RBP24.36■■□□□ 1.49
RBM38-201ENST00000342690 MCM6Q14566 821 aa24.36■■□□□ 1.49
RBM38-201ENST00000342690 LPIN1Q14693 890 aa24.36■■□□□ 1.49
RBM38-201ENST00000342690 E2F4Q16254 413 aa24.36■■□□□ 1.49
RBM38-201ENST00000342690 NAALADL2Q58DX5 795 aa24.36■■□□□ 1.49
RBM38-201ENST00000342690 FBXO47Q5MNV8 452 aa24.36■■□□□ 1.49
RBM38-201ENST00000342690 TMEM240Q5SV17 173 aa24.36■■□□□ 1.49
RBM38-201ENST00000342690 SV2BQ7L1I2 683 aa24.36■■□□□ 1.49
RBM38-201ENST00000342690 CEP57L1Q8IYX8 460 aa24.36■■□□□ 1.49
RBM38-201ENST00000342690 TCP11Q8WWU5 503 aa24.36■■□□□ 1.49
RBM38-201ENST00000342690 OSMRQ99650 979 aa24.36■■□□□ 1.49
RBM38-201ENST00000342690 MAGEF1Q9HAY2 307 aa24.36■■□□□ 1.49
RBM38-201ENST00000342690 SLC12A3P55017 1021 aa24.35■■□□□ 1.49
RBM38-201ENST00000342690 TCTN1Q2MV58 587 aa24.35■■□□□ 1.49
RBM38-201ENST00000342690 C9orf50Q5SZB4 431 aa24.35■■□□□ 1.49
RBM38-201ENST00000342690 PSRC1Q6PGN9 363 aaPredicted RBP24.35■■□□□ 1.49
RBM38-201ENST00000342690 ZNF365Q70YC5 407 aa24.35■■□□□ 1.49
RBM38-201ENST00000342690 MAEAQ7L5Y9 396 aa24.35■■□□□ 1.49
RBM38-201ENST00000342690 GPBP1Q86WP2 473 aa24.35■■□□□ 1.49
RBM38-201ENST00000342690 RHPN2Q8IUC4 686 aa24.35■■□□□ 1.49
RBM38-201ENST00000342690 KSR1Q8IVT5 923 aa24.35■■□□□ 1.49
RBM38-201ENST00000342690 MCPH1Q8NEM0 835 aa24.35■■□□□ 1.49
RBM38-201ENST00000342690 TMEM40Q8WWA1 233 aa24.35■■□□□ 1.49
RBM38-201ENST00000342690 PSPC1Q8WXF1 523 aaKnown RBP24.35■■□□□ 1.49
RBM38-201ENST00000342690 RUSC1Q9BVN2 902 aa24.35■■□□□ 1.49
RBM38-201ENST00000342690 GPRC5CQ9NQ84 441 aa24.35■■□□□ 1.49
RBM38-201ENST00000342690 KCND2Q9NZV8 630 aa24.35■■□□□ 1.49
RBM38-201ENST00000342690 COL4A3BPQ9Y5P4 624 aa24.35■■□□□ 1.49
RBM38-201ENST00000342690 ARL2P36404 184 aa24.34■■□□□ 1.49
RBM38-201ENST00000342690 CRYBB1P53674 252 aaPredicted RBP24.34■■□□□ 1.49
RBM38-201ENST00000342690 FAM160A1Q05DH4 1040 aa24.34■■□□□ 1.49
RBM38-201ENST00000342690 PLEKHG4Q58EX7 1191 aa24.34■■□□□ 1.49
RBM38-201ENST00000342690 RINT1Q6NUQ1 792 aa24.34■■□□□ 1.49
RBM38-201ENST00000342690 TSHZ1Q6ZSZ6 1077 aa24.34■■□□□ 1.49
RBM38-201ENST00000342690 PRPF31Q8WWY3 499 aaKnown RBP24.34■■□□□ 1.49
RBM38-201ENST00000342690 LRRC27Q9C0I9 530 aa24.34■■□□□ 1.49
RBM38-201ENST00000342690 POLR3FQ9H1D9 316 aaPredicted RBP24.34■■□□□ 1.49
RBM38-201ENST00000342690 AGO3Q9H9G7 860 aaKnown RBP24.34■■□□□ 1.49
RBM38-201ENST00000342690 COLQQ9Y215 455 aaPredicted RBP24.34■■□□□ 1.49
RBM38-201ENST00000342690 FGBP02675 491 aa24.33■■□□□ 1.49
RBM38-201ENST00000342690 LAMTOR4Q0VGL1 99 aa24.33■■□□□ 1.49
RBM38-201ENST00000342690 SHHQ15465 462 aa24.33■■□□□ 1.49
RBM38-201ENST00000342690 ZNF710Q8N1W2 664 aa24.33■■□□□ 1.49
RBM38-201ENST00000342690 DBF4BQ8NFT6 615 aa24.33■■□□□ 1.49
RBM38-201ENST00000342690 ASAP3Q8TDY4 903 aa24.33■■□□□ 1.49
RBM38-201ENST00000342690 NLRP7Q8WX94 980 aa24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms