RNA–Protein interactions for RNA: ENST00000342203.7

SSX2IP-201, Transcript of SSX family member 2 interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX2IP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-201ENST00000342203 SNAP25P60880 206 aa13.45□□□□□ -0.26
SSX2IP-201ENST00000342203 PREPLQ4J6C6 727 aaPredicted RBP13.45□□□□□ -0.26
SSX2IP-201ENST00000342203 GJB7Q6PEY0 223 aa13.45□□□□□ -0.26
SSX2IP-201ENST00000342203 C4orf33Q8N1A6 199 aa13.45□□□□□ -0.26
SSX2IP-201ENST00000342203 SLC35G2Q8TBE7 412 aa13.45□□□□□ -0.26
SSX2IP-201ENST00000342203 CFAP57Q96MR6 1250 aa13.45□□□□□ -0.26
SSX2IP-201ENST00000342203 FAM118BQ9BPY3 351 aa13.45□□□□□ -0.26
SSX2IP-201ENST00000342203 EDEM3Q9BZQ6 932 aa13.45□□□□□ -0.26
SSX2IP-201ENST00000342203 CEMIPQ8WUJ3 1361 aa13.45□□□□□ -0.26
SSX2IP-201ENST00000342203 GOLGA8RI6L899 631 aa13.45□□□□□ -0.26
SSX2IP-201ENST00000342203 MT-ND3P03897 115 aa13.45□□□□□ -0.26
SSX2IP-201ENST00000342203 MAN1A1P33908 653 aa13.45□□□□□ -0.26
SSX2IP-201ENST00000342203 RFFLQ8WZ73 363 aa13.45□□□□□ -0.26
SSX2IP-201ENST00000342203 BARHL2Q9NY43 387 aa13.45□□□□□ -0.26
SSX2IP-201ENST00000342203 USP17L5A8MUK1 530 aa13.45□□□□□ -0.26
SSX2IP-201ENST00000342203 CREB3O43889 395 aa13.45□□□□□ -0.26
SSX2IP-201ENST00000342203 TROAPQ12815 778 aa13.45□□□□□ -0.26
SSX2IP-201ENST00000342203 RHOT2Q8IXI1 618 aa13.45□□□□□ -0.26
SSX2IP-201ENST00000342203 ERP44Q9BS26 406 aa13.45□□□□□ -0.26
SSX2IP-201ENST00000342203 NYXQ9GZU5 481 aa13.45□□□□□ -0.26
SSX2IP-201ENST00000342203 ANAPC7Q9UJX3 599 aa13.45□□□□□ -0.26
SSX2IP-201ENST00000342203 PPRC1Q5VV67 1664 aaKnown RBP13.45□□□□□ -0.26
SSX2IP-201ENST00000342203 PRLRP16471 622 aa13.45□□□□□ -0.26
SSX2IP-201ENST00000342203 GCLMP48507 274 aa13.45□□□□□ -0.26
SSX2IP-201ENST00000342203 GTF2IP78347 998 aa13.45□□□□□ -0.26
SSX2IP-201ENST00000342203 ZNF844Q08AG5 666 aa13.45□□□□□ -0.26
SSX2IP-201ENST00000342203 CTTNQ14247 550 aaKnown RBP13.45□□□□□ -0.26
SSX2IP-201ENST00000342203 RASA3Q14644 834 aa13.45□□□□□ -0.26
SSX2IP-201ENST00000342203 LGSNQ5TDP6 509 aa13.45□□□□□ -0.26
SSX2IP-201ENST00000342203 KIAA0825Q8IV33 1275 aa13.45□□□□□ -0.26
SSX2IP-201ENST00000342203 SLFN12Q8IYM2 578 aa13.45□□□□□ -0.26
SSX2IP-201ENST00000342203 GLT8D2Q9H1C3 349 aa13.45□□□□□ -0.26
SSX2IP-201ENST00000342203 ATP6V0A4Q9HBG4 840 aa13.45□□□□□ -0.26
SSX2IP-201ENST00000342203 FAM187AA6NFU0 413 aa13.45□□□□□ -0.26
SSX2IP-201ENST00000342203 GNPATO15228 680 aa13.45□□□□□ -0.26
SSX2IP-201ENST00000342203 HAUS5O94927 633 aa13.45□□□□□ -0.26
SSX2IP-201ENST00000342203 TARSP26639 723 aaKnown RBP13.45□□□□□ -0.26
SSX2IP-201ENST00000342203 CHRNA3P32297 505 aa13.45□□□□□ -0.26
SSX2IP-201ENST00000342203 SERPINB4P48594 390 aa13.45□□□□□ -0.26
SSX2IP-201ENST00000342203 EPHB1P54762 984 aa13.45□□□□□ -0.26
SSX2IP-201ENST00000342203 DNAJC3Q13217 504 aa13.45□□□□□ -0.26
SSX2IP-201ENST00000342203 DBN1Q16643 649 aa13.45□□□□□ -0.26
SSX2IP-201ENST00000342203 BBOF1Q8ND07 529 aa13.45□□□□□ -0.26
SSX2IP-201ENST00000342203 MAD1L1Q9Y6D9 718 aa13.45□□□□□ -0.26
SSX2IP-201ENST00000342203 ZCCHC11Q5TAX3 1644 aaKnown RBP13.45□□□□□ -0.26
SSX2IP-201ENST00000342203 MYCLP12524 364 aaPredicted RBP13.44□□□□□ -0.26
SSX2IP-201ENST00000342203 COPS2P61201 443 aa13.44□□□□□ -0.26
SSX2IP-201ENST00000342203 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.44□□□□□ -0.26
SSX2IP-201ENST00000342203 DNAJC9Q8WXX5 260 aa13.44□□□□□ -0.26
SSX2IP-201ENST00000342203 ANAPC4Q9UJX5 808 aa13.44□□□□□ -0.26
SSX2IP-201ENST00000342203 CARD10Q9BWT7 1032 aa13.44□□□□□ -0.26
SSX2IP-201ENST00000342203 A0A1W2PQJ5 194 aa13.44□□□□□ -0.26
SSX2IP-201ENST00000342203 GNAT1P11488 350 aa13.44□□□□□ -0.26
SSX2IP-201ENST00000342203 CEP120Q8N960 986 aa13.44□□□□□ -0.26
SSX2IP-201ENST00000342203 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.44□□□□□ -0.269e-7■■■■■ 60.5
SSX2IP-201ENST00000342203 PIGBQ92521 554 aa13.44□□□□□ -0.26
SSX2IP-201ENST00000342203 C7orf25Q9BPX7 421 aa13.44□□□□□ -0.26
SSX2IP-201ENST00000342203 TRIM55Q9BYV6 548 aa13.44□□□□□ -0.26
SSX2IP-201ENST00000342203 GINM1Q9NU53 330 aa13.44□□□□□ -0.26
SSX2IP-201ENST00000342203 CASQ2O14958 399 aaPredicted RBP13.44□□□□□ -0.26
SSX2IP-201ENST00000342203 NOL3O60936 208 aaKnown RBP13.44□□□□□ -0.26
SSX2IP-201ENST00000342203 UBTFL6P0CB48 400 aaPredicted RBP13.44□□□□□ -0.26
SSX2IP-201ENST00000342203 KITP10721 976 aa13.44□□□□□ -0.26
SSX2IP-201ENST00000342203 SCNN1DP51172 638 aa13.44□□□□□ -0.26
SSX2IP-201ENST00000342203 SPICE1Q8N0Z3 855 aa13.44□□□□□ -0.26
SSX2IP-201ENST00000342203 GPR101Q96P66 508 aaPredicted RBP13.44□□□□□ -0.26
SSX2IP-201ENST00000342203 SEMA6BQ9H3T3 888 aa13.44□□□□□ -0.26
SSX2IP-201ENST00000342203 MIF4GDA9UHW6 222 aaKnown RBP13.44□□□□□ -0.26
SSX2IP-201ENST00000342203 RNASELQ05823 741 aaKnown RBP13.44□□□□□ -0.26
SSX2IP-201ENST00000342203 MDH1BQ5I0G3 518 aa13.44□□□□□ -0.26
SSX2IP-201ENST00000342203 IFT122Q9HBG6 1241 aa13.44□□□□□ -0.26
SSX2IP-201ENST00000342203 SH3GLB2Q9NR46 395 aa13.44□□□□□ -0.26
SSX2IP-201ENST00000342203 CNTNAP5Q8WYK1 1306 aa13.43□□□□□ -0.26
SSX2IP-201ENST00000342203 PPFIA2O75334 1257 aa13.43□□□□□ -0.26
SSX2IP-201ENST00000342203 MXI1P50539 228 aa13.43□□□□□ -0.26
SSX2IP-201ENST00000342203 BASP1P80723 227 aaKnown RBP13.43□□□□□ -0.26
SSX2IP-201ENST00000342203 RNF25Q96BH1 459 aaPredicted RBP13.43□□□□□ -0.26
SSX2IP-201ENST00000342203 CCDC124Q96CT7 223 aaKnown RBP13.43□□□□□ -0.26
SSX2IP-201ENST00000342203 MTA3Q9BTC8 594 aa13.43□□□□□ -0.26
SSX2IP-201ENST00000342203 AGPSO00116 658 aa13.43□□□□□ -0.26
SSX2IP-201ENST00000342203 KCNA3P22001 575 aa13.43□□□□□ -0.26
SSX2IP-201ENST00000342203 IFI35P80217 286 aaPredicted RBP13.43□□□□□ -0.26
SSX2IP-201ENST00000342203 FAM102BQ5T8I3 360 aa13.43□□□□□ -0.26
SSX2IP-201ENST00000342203 SMC1BQ8NDV3 1235 aa13.43□□□□□ -0.26
SSX2IP-201ENST00000342203 C1orf112Q9NSG2 853 aa13.43□□□□□ -0.26
SSX2IP-201ENST00000342203 CNOT8Q9UFF9 292 aaKnown RBP13.43□□□□□ -0.26
SSX2IP-201ENST00000342203 ZNF804BA4D1E1 1349 aa13.43□□□□□ -0.26
SSX2IP-201ENST00000342203 ATP5HO75947 161 aa13.43□□□□□ -0.26
SSX2IP-201ENST00000342203 GPC5P78333 572 aa13.43□□□□□ -0.26
SSX2IP-201ENST00000342203 KNOP1Q1ED39 458 aaKnown RBP13.43□□□□□ -0.26
SSX2IP-201ENST00000342203 ST13P4Q8IZP2 240 aaPredicted RBP13.43□□□□□ -0.26
SSX2IP-201ENST00000342203 OGFOD1Q8N543 542 aa13.43□□□□□ -0.26
SSX2IP-201ENST00000342203 NT5C1BQ96P26 610 aa13.43□□□□□ -0.26
SSX2IP-201ENST00000342203 NPHS2Q9NP85 383 aa13.43□□□□□ -0.26
SSX2IP-201ENST00000342203 HAO1Q9UJM8 370 aa13.43□□□□□ -0.26
SSX2IP-201ENST00000342203 LRRC10BA6NIK2 292 aa13.43□□□□□ -0.26
SSX2IP-201ENST00000342203 ORC4O43929 436 aa13.43□□□□□ -0.26
SSX2IP-201ENST00000342203 KRT17Q04695 432 aa13.43□□□□□ -0.26
SSX2IP-201ENST00000342203 NAGPAQ9UK23 515 aa13.43□□□□□ -0.26
SSX2IP-201ENST00000342203 C15orf41Q9Y2V0 281 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms