RNA–Protein interactions for RNA: ENST00000341290.6

PERM1-201, Transcript of PPARGC1 and ESRR induced regulator, muscle 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PERM1, Length 3,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1-201ENST00000341290 SPATA31C1P0DKV0 1188 aa16.58■□□□□ 0.24
PERM1-201ENST00000341290 ARHGAP4P98171 946 aa16.58■□□□□ 0.24
PERM1-201ENST00000341290 MKRN4PQ13434 485 aaPredicted RBP16.58■□□□□ 0.24
PERM1-201ENST00000341290 EPHA7Q15375 998 aa16.58■□□□□ 0.24
PERM1-201ENST00000341290 EDRF1Q3B7T1 1238 aa16.58■□□□□ 0.24
PERM1-201ENST00000341290 HYIQ5T013 277 aa16.58■□□□□ 0.24
PERM1-201ENST00000341290 CERS5Q8N5B7 392 aa16.58■□□□□ 0.24
PERM1-201ENST00000341290 ACTRT1Q8TDG2 376 aa16.58■□□□□ 0.24
PERM1-201ENST00000341290 GLG1Q92896 1179 aa16.58■□□□□ 0.24
PERM1-201ENST00000341290 SIX2Q9NPC8 291 aa16.58■□□□□ 0.24
PERM1-201ENST00000341290 IGKV6D-41A0A0C4DH26 115 aa16.58■□□□□ 0.24
PERM1-201ENST00000341290 BUB1BO60566 1050 aaPredicted RBP16.58■□□□□ 0.24
PERM1-201ENST00000341290 NEBLO76041 1014 aa16.58■□□□□ 0.24
PERM1-201ENST00000341290 GCFC2P16383 781 aaKnown RBP16.58■□□□□ 0.24
PERM1-201ENST00000341290 NMT1P30419 496 aaKnown RBP16.58■□□□□ 0.24
PERM1-201ENST00000341290 PLS1Q14651 629 aa16.58■□□□□ 0.24
PERM1-201ENST00000341290 LLGL1Q15334 1064 aa16.58■□□□□ 0.24
PERM1-201ENST00000341290 SLC35C1Q96A29 364 aa16.58■□□□□ 0.24
PERM1-201ENST00000341290 DDX20Q9UHI6 824 aaKnown RBP16.58■□□□□ 0.24
PERM1-201ENST00000341290 GAKO14976 1311 aa16.58■□□□□ 0.24
PERM1-201ENST00000341290 IGSF9BQ9UPX0 1349 aa16.58■□□□□ 0.24
PERM1-201ENST00000341290 TLDC2A0PJX2 215 aa16.57■□□□□ 0.24
PERM1-201ENST00000341290 FRMD3A2A2Y4 597 aa16.57■□□□□ 0.24
PERM1-201ENST00000341290 IFFO1Q0D2I5 559 aa16.57■□□□□ 0.24
PERM1-201ENST00000341290 CUL1Q13616 776 aa16.57■□□□□ 0.24
PERM1-201ENST00000341290 CTTNQ14247 550 aaKnown RBP16.57■□□□□ 0.24
PERM1-201ENST00000341290 SAMD1Q6SPF0 538 aaPredicted RBP16.57■□□□□ 0.24
PERM1-201ENST00000341290 SLF2Q8IX21 1173 aa16.57■□□□□ 0.24
PERM1-201ENST00000341290 PRPF38AQ8NAV1 312 aaKnown RBP16.57■□□□□ 0.24
PERM1-201ENST00000341290 N4BP2L2Q92802 583 aaPredicted RBP16.57■□□□□ 0.24
PERM1-201ENST00000341290 LRRC45Q96CN5 670 aa16.57■□□□□ 0.24
PERM1-201ENST00000341290 ASTN1O14525 1302 aa16.57■□□□□ 0.24
PERM1-201ENST00000341290 A6NNZ2 444 aa16.57■□□□□ 0.24
PERM1-201ENST00000341290 EVI5O60447 810 aa16.57■□□□□ 0.24
PERM1-201ENST00000341290 ARHGAP44Q17R89 818 aa16.57■□□□□ 0.24
PERM1-201ENST00000341290 TUBB8Q3ZCM7 444 aa16.57■□□□□ 0.24
PERM1-201ENST00000341290 ARHGAP27Q6ZUM4 889 aa16.57■□□□□ 0.24
PERM1-201ENST00000341290 FRMD5Q7Z6J6 570 aa16.57■□□□□ 0.24
PERM1-201ENST00000341290 NT5DC3Q86UY8 548 aa16.57■□□□□ 0.24
PERM1-201ENST00000341290 CCDC13Q8IYE1 715 aa16.57■□□□□ 0.24
PERM1-201ENST00000341290 RTKN2Q8IZC4 609 aa16.57■□□□□ 0.24
PERM1-201ENST00000341290 LNX1Q8TBB1 728 aaPredicted RBP16.57■□□□□ 0.24
PERM1-201ENST00000341290 SLC35G2Q8TBE7 412 aa16.57■□□□□ 0.24
PERM1-201ENST00000341290 TAS2R14Q9NYV8 317 aa16.57■□□□□ 0.24
PERM1-201ENST00000341290 SCN9AQ15858 1988 aa16.57■□□□□ 0.24
PERM1-201ENST00000341290 GMNCA6NCL1 334 aa16.56■□□□□ 0.24
PERM1-201ENST00000341290 MEIS2O14770 477 aa16.56■□□□□ 0.24
PERM1-201ENST00000341290 TRIM49P0CI25 452 aa16.56■□□□□ 0.24
PERM1-201ENST00000341290 TRIM49CP0CI26 452 aa16.56■□□□□ 0.24
PERM1-201ENST00000341290 EEF2P13639 858 aaKnown RBP16.56■□□□□ 0.24
PERM1-201ENST00000341290 RDXP35241 583 aaKnown RBP16.56■□□□□ 0.24
PERM1-201ENST00000341290 MICALCLQ6ZW33 695 aa16.56■□□□□ 0.24
PERM1-201ENST00000341290 PALB2Q86YC2 1186 aa16.56■□□□□ 0.24
PERM1-201ENST00000341290 TMOD4Q9NZQ9 345 aa16.56■□□□□ 0.24
PERM1-201ENST00000341290 FOCADQ5VW36 1801 aa16.56■□□□□ 0.24
PERM1-201ENST00000341290 LRRN2O75325 713 aa16.56■□□□□ 0.24
PERM1-201ENST00000341290 TBCAO75347 108 aaKnown RBP16.56■□□□□ 0.24
PERM1-201ENST00000341290 PAX7P23759 505 aa16.56■□□□□ 0.24
PERM1-201ENST00000341290 CYP2J2P51589 502 aa16.56■□□□□ 0.24
PERM1-201ENST00000341290 SPIRE1Q08AE8 756 aa16.56■□□□□ 0.24
PERM1-201ENST00000341290 IFI16Q16666 785 aaKnown RBP16.56■□□□□ 0.24
PERM1-201ENST00000341290 UBAP2Q5T6F2 1119 aaKnown RBP16.56■□□□□ 0.24
PERM1-201ENST00000341290 CABS1Q96KC9 395 aa16.56■□□□□ 0.24
PERM1-201ENST00000341290 GOLGA6L7A0A1B0GV03 622 aa16.56■□□□□ 0.24
PERM1-201ENST00000341290 TMEM110-MUSTN1A8MSY1 372 aa16.56■□□□□ 0.24
PERM1-201ENST00000341290 EML1O00423 815 aa16.56■□□□□ 0.24
PERM1-201ENST00000341290 CALUO43852 315 aaPredicted RBP16.56■□□□□ 0.24
PERM1-201ENST00000341290 SHBGP04278 402 aa16.56■□□□□ 0.24
PERM1-201ENST00000341290 UBXN2AP68543 259 aa16.56■□□□□ 0.24
PERM1-201ENST00000341290 GPATCH4Q5T3I0 446 aaKnown RBP16.56■□□□□ 0.24
PERM1-201ENST00000341290 PPP1R18Q6NYC8 613 aa16.56■□□□□ 0.24
PERM1-201ENST00000341290 TMC3Q7Z5M5 1100 aa16.56■□□□□ 0.24
PERM1-201ENST00000341290 VPS36Q86VN1 386 aa16.56■□□□□ 0.24
PERM1-201ENST00000341290 SUPT20HQ8NEM7 779 aa16.56■□□□□ 0.24
PERM1-201ENST00000341290 RNF217Q8TC41 542 aa16.56■□□□□ 0.24
PERM1-201ENST00000341290 RAPGEF5Q92565 580 aa16.56■□□□□ 0.24
PERM1-201ENST00000341290 FAM163AQ96GL9 167 aaPredicted RBP16.56■□□□□ 0.24
PERM1-201ENST00000341290 ERVK-5Q9HDB9 667 aa16.56■□□□□ 0.24
PERM1-201ENST00000341290 SLC12A6Q9UHW9 1150 aa16.56■□□□□ 0.24
PERM1-201ENST00000341290 TRAF3IP3Q9Y228 551 aa16.56■□□□□ 0.24
PERM1-201ENST00000341290 UTP11Q9Y3A2 253 aaKnown RBP16.56■□□□□ 0.24
PERM1-201ENST00000341290 ZBTB48P10074 688 aaPredicted RBP16.55■□□□□ 0.24
PERM1-201ENST00000341290 COL4A5P29400 1685 aa16.55■□□□□ 0.24
PERM1-201ENST00000341290 DALRD3Q5D0E6 543 aaKnown RBP16.55■□□□□ 0.24
PERM1-201ENST00000341290 DCAF12L1Q5VU92 463 aa16.55■□□□□ 0.24
PERM1-201ENST00000341290 CCDC121Q6ZUS5 278 aa16.55■□□□□ 0.24
PERM1-201ENST00000341290 MYCT1Q8N699 235 aa16.55■□□□□ 0.24
PERM1-201ENST00000341290 ETNPPLQ8TBG4 499 aa16.55■□□□□ 0.24
PERM1-201ENST00000341290 SGSM3Q96HU1 749 aa16.55■□□□□ 0.24
PERM1-201ENST00000341290 BZW2Q9Y6E2 419 aaKnown RBP16.55■□□□□ 0.24
PERM1-201ENST00000341290 PPP4R3CPQ6ZMV5 832 aa16.55■□□□□ 0.24
PERM1-201ENST00000341290 TPH2Q8IWU9 490 aa16.55■□□□□ 0.24
PERM1-201ENST00000341290 SYT2Q8N9I0 419 aaPredicted RBP16.55■□□□□ 0.24
PERM1-201ENST00000341290 ARHGEF26Q96DR7 871 aa16.55■□□□□ 0.24
PERM1-201ENST00000341290 CCDC114Q96M63 670 aa16.55■□□□□ 0.24
PERM1-201ENST00000341290 AMFRQ9UKV5 643 aa16.55■□□□□ 0.24
PERM1-201ENST00000341290 PNMA2Q9UL42 364 aa16.55■□□□□ 0.24
PERM1-201ENST00000341290 SPDYE3A6NKU9 549 aa16.54■□□□□ 0.24
PERM1-201ENST00000341290 FSBPO95073 299 aa16.54■□□□□ 0.24
PERM1-201ENST00000341290 GDF11O95390 407 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms