RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 CHD9Q3L8U1 2897 aa16.99■□□□□ 0.31
UBE3B-201ENST00000340074 GAS2O43903 313 aaKnown RBP16.98■□□□□ 0.31
UBE3B-201ENST00000340074 USO1O60763 962 aaKnown RBP16.98■□□□□ 0.31
UBE3B-201ENST00000340074 RPS6KA5O75582 802 aa16.98■□□□□ 0.31
UBE3B-201ENST00000340074 PBX2P40425 430 aa16.98■□□□□ 0.31
UBE3B-201ENST00000340074 NFX1Q12986 1120 aaKnown RBP16.98■□□□□ 0.31
UBE3B-201ENST00000340074 ZRSR1Q15695 479 aaKnown RBP16.98■□□□□ 0.31
UBE3B-201ENST00000340074 TMCO2Q7Z6W1 182 aaPredicted RBP16.98■□□□□ 0.31
UBE3B-201ENST00000340074 PHOSPHO2Q8TCD6 241 aa16.98■□□□□ 0.31
UBE3B-201ENST00000340074 TCP11Q8WWU5 503 aa16.98■□□□□ 0.31
UBE3B-201ENST00000340074 PRPF31Q8WWY3 499 aaKnown RBP16.98■□□□□ 0.31
UBE3B-201ENST00000340074 PSPC1Q8WXF1 523 aaKnown RBP16.98■□□□□ 0.31
UBE3B-201ENST00000340074 AK8Q96MA6 479 aa16.98■□□□□ 0.31
UBE3B-201ENST00000340074 SCLT1Q96NL6 688 aa16.98■□□□□ 0.31
UBE3B-201ENST00000340074 ATP6V0A4Q9HBG4 840 aa16.98■□□□□ 0.31
UBE3B-201ENST00000340074 COL4A3BPQ9Y5P4 624 aa16.98■□□□□ 0.31
UBE3B-201ENST00000340074 A0A087WZ62 844 aa16.97■□□□□ 0.31
UBE3B-201ENST00000340074 ARHGEF35A5YM69 484 aa16.97■□□□□ 0.31
UBE3B-201ENST00000340074 EIF4BP23588 611 aaKnown RBP16.97■□□□□ 0.31
UBE3B-201ENST00000340074 RABGGTBP53611 331 aa16.97■□□□□ 0.31
UBE3B-201ENST00000340074 CDC42EP1Q00587 391 aa16.97■□□□□ 0.31
UBE3B-201ENST00000340074 CABP7Q86V35 215 aa16.97■□□□□ 0.31
UBE3B-201ENST00000340074 FAM228AQ86W67 206 aa16.97■□□□□ 0.31
UBE3B-201ENST00000340074 NLRP4Q96MN2 994 aa16.97■□□□□ 0.31
UBE3B-201ENST00000340074 ZNF396Q96N95 335 aaPredicted RBP16.97■□□□□ 0.31
UBE3B-201ENST00000340074 FDXACB1Q9BRP7 624 aaPredicted RBP16.97■□□□□ 0.31
UBE3B-201ENST00000340074 PBX4Q9BYU1 374 aa16.97■□□□□ 0.31
UBE3B-201ENST00000340074 BHMT2Q9H2M3 363 aa16.97■□□□□ 0.31
UBE3B-201ENST00000340074 ERVK-5Q9HDB9 667 aa16.97■□□□□ 0.31
UBE3B-201ENST00000340074 TFIP11Q9UBB9 837 aaKnown RBP16.97■□□□□ 0.31
UBE3B-201ENST00000340074 FBXO2Q9UK22 296 aaPredicted RBP16.97■□□□□ 0.31
UBE3B-201ENST00000340074 CHD7Q9P2D1 2997 aa16.97■□□□□ 0.31
UBE3B-201ENST00000340074 MYO9BQ13459 2157 aa16.97■□□□□ 0.31
UBE3B-201ENST00000340074 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.96■□□□□ 0.31
UBE3B-201ENST00000340074 E9PMD0 336 aa16.96■□□□□ 0.31
UBE3B-201ENST00000340074 DNAJB2P25686 324 aa16.96■□□□□ 0.31
UBE3B-201ENST00000340074 LONP1P36776 959 aaKnown RBP16.96■□□□□ 0.31
UBE3B-201ENST00000340074 NASPP49321 788 aaPredicted RBP16.96■□□□□ 0.31
UBE3B-201ENST00000340074 LAMTOR4Q0VGL1 99 aa16.96■□□□□ 0.31
UBE3B-201ENST00000340074 SLC39A14Q15043 492 aa16.96■□□□□ 0.31
UBE3B-201ENST00000340074 HYIQ5T013 277 aa16.96■□□□□ 0.31
UBE3B-201ENST00000340074 PADI6Q6TGC4 694 aa16.96■□□□□ 0.31
UBE3B-201ENST00000340074 MAEAQ7L5Y9 396 aa16.96■□□□□ 0.31
UBE3B-201ENST00000340074 KCNK18Q7Z418 384 aa16.96■□□□□ 0.31
UBE3B-201ENST00000340074 ZNF410Q86VK4 478 aa16.96■□□□□ 0.31
UBE3B-201ENST00000340074 HERC6Q8IVU3 1022 aa16.96■□□□□ 0.31
UBE3B-201ENST00000340074 MYOCDQ8IZQ8 938 aa16.96■□□□□ 0.31
UBE3B-201ENST00000340074 PNMA5Q96PV4 448 aa16.96■□□□□ 0.31
UBE3B-201ENST00000340074 PLIN2Q99541 437 aa16.96■□□□□ 0.31
UBE3B-201ENST00000340074 GCOM2Q9BZD3 368 aaPredicted RBP16.96■□□□□ 0.31
UBE3B-201ENST00000340074 CSRNP2Q9H175 543 aa16.96■□□□□ 0.31
UBE3B-201ENST00000340074 TMX1Q9H3N1 280 aa16.96■□□□□ 0.31
UBE3B-201ENST00000340074 DAXXQ9UER7 740 aaPredicted RBP16.96■□□□□ 0.31
UBE3B-201ENST00000340074 ST3GAL5Q9UNP4 418 aa16.96■□□□□ 0.31
UBE3B-201ENST00000340074 DNM3Q9UQ16 869 aa16.96■□□□□ 0.31
UBE3B-201ENST00000340074 SRPRBQ9Y5M8 271 aaKnown RBP16.96■□□□□ 0.31
UBE3B-201ENST00000340074 ENPP3O14638 875 aa16.96■□□□□ 0.3
UBE3B-201ENST00000340074 GPR182O15218 404 aa16.96■□□□□ 0.3
UBE3B-201ENST00000340074 CSDE1O75534 798 aaKnown RBP16.96■□□□□ 0.3
UBE3B-201ENST00000340074 BRD1O95696 1058 aa16.96■□□□□ 0.3
UBE3B-201ENST00000340074 AMHP03971 560 aa16.96■□□□□ 0.3
UBE3B-201ENST00000340074 SRGAP2CP0DJJ0 459 aa16.96■□□□□ 0.3
UBE3B-201ENST00000340074 DARSP14868 501 aaKnown RBP16.96■□□□□ 0.3
UBE3B-201ENST00000340074 MYOGP15173 224 aa16.96■□□□□ 0.3
UBE3B-201ENST00000340074 UBA7P41226 1012 aa16.96■□□□□ 0.3
UBE3B-201ENST00000340074 GRB10Q13322 594 aa16.96■□□□□ 0.3
UBE3B-201ENST00000340074 STK38Q15208 465 aa16.96■□□□□ 0.3
UBE3B-201ENST00000340074 SPECC1Q5M775 1068 aa16.96■□□□□ 0.3
UBE3B-201ENST00000340074 ODR4Q5SWX8 454 aa16.96■□□□□ 0.3
UBE3B-201ENST00000340074 RTN4RL1Q86UN2 441 aaPredicted RBP16.96■□□□□ 0.3
UBE3B-201ENST00000340074 LINC01599Q8WXQ3 324 aa16.96■□□□□ 0.3
UBE3B-201ENST00000340074 CDK5RAP3Q96JB5 506 aa16.96■□□□□ 0.3
UBE3B-201ENST00000340074 FTHL17Q9BXU8 183 aa16.96■□□□□ 0.3
UBE3B-201ENST00000340074 NT5C3AQ9H0P0 336 aa16.96■□□□□ 0.3
UBE3B-201ENST00000340074 GPRC5CQ9NQ84 441 aa16.96■□□□□ 0.3
UBE3B-201ENST00000340074 ZDHHC9Q9Y397 364 aa16.96■□□□□ 0.3
UBE3B-201ENST00000340074 NLRC5Q86WI3 1866 aa16.95■□□□□ 0.3
UBE3B-201ENST00000340074 ASAP2O43150 1006 aa16.95■□□□□ 0.3
UBE3B-201ENST00000340074 EYA4O95677 639 aa16.95■□□□□ 0.3
UBE3B-201ENST00000340074 FGFR4P22455 802 aa16.95■□□□□ 0.3
UBE3B-201ENST00000340074 ARL2P36404 184 aa16.95■□□□□ 0.3
UBE3B-201ENST00000340074 MXD4Q14582 209 aaPredicted RBP16.95■□□□□ 0.3
UBE3B-201ENST00000340074 RAB30Q15771 203 aa16.95■□□□□ 0.3
UBE3B-201ENST00000340074 GPR153Q6NV75 609 aa16.95■□□□□ 0.3
UBE3B-201ENST00000340074 FAM117BQ6P1L5 589 aa16.95■□□□□ 0.3
UBE3B-201ENST00000340074 LINC00301Q8NCQ3 95 aa16.95■□□□□ 0.3
UBE3B-201ENST00000340074 EPSTI1Q96J88 318 aa16.95■□□□□ 0.3
UBE3B-201ENST00000340074 CLIC6Q96NY7 704 aa16.95■□□□□ 0.3
UBE3B-201ENST00000340074 IFT122Q9HBG6 1241 aa16.95■□□□□ 0.3
UBE3B-201ENST00000340074 MSRAQ9UJ68 235 aa16.95■□□□□ 0.3
UBE3B-201ENST00000340074 YBX2Q9Y2T7 364 aaKnown RBP16.95■□□□□ 0.3
UBE3B-201ENST00000340074 MORC2Q9Y6X9 1032 aaPredicted RBP16.95■□□□□ 0.3
UBE3B-201ENST00000340074 FNDC1Q4ZHG4 1894 aaPredicted RBP16.94■□□□□ 0.3
UBE3B-201ENST00000340074 MGEA5O60502 916 aa16.94■□□□□ 0.3
UBE3B-201ENST00000340074 UPP2O95045 317 aa16.94■□□□□ 0.3
UBE3B-201ENST00000340074 GJB5O95377 273 aa16.94■□□□□ 0.3
UBE3B-201ENST00000340074 CYP11B2P19099 503 aa16.94■□□□□ 0.3
UBE3B-201ENST00000340074 KARSQ15046 597 aaKnown RBP16.94■□□□□ 0.3
UBE3B-201ENST00000340074 TMEM119Q4V9L6 283 aa16.94■□□□□ 0.3
UBE3B-201ENST00000340074 FAM102BQ5T8I3 360 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms