RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 FAM86B2P0C5J1 330 aa17.49■□□□□ 0.39
SCARB1-202ENST00000339570 ZYXQ15942 572 aaKnown RBP17.49■□□□□ 0.39
SCARB1-202ENST00000339570 COBLL1Q53SF7 1204 aa17.49■□□□□ 0.39
SCARB1-202ENST00000339570 GDAP1Q8TB36 358 aa17.49■□□□□ 0.39
SCARB1-202ENST00000339570 ALG3Q92685 438 aa17.49■□□□□ 0.39
SCARB1-202ENST00000339570 SYN2Q92777 582 aaPredicted RBP17.49■□□□□ 0.39
SCARB1-202ENST00000339570 SLC35C1Q96A29 364 aa17.49■□□□□ 0.39
SCARB1-202ENST00000339570 KCNK9Q9NPC2 374 aa17.49■□□□□ 0.39
SCARB1-202ENST00000339570 TBK1Q9UHD2 729 aa17.49■□□□□ 0.39
SCARB1-202ENST00000339570 STK38LQ9Y2H1 464 aa17.49■□□□□ 0.39
SCARB1-202ENST00000339570 EML1O00423 815 aa17.49■□□□□ 0.39
SCARB1-202ENST00000339570 CALUO43852 315 aaPredicted RBP17.49■□□□□ 0.39
SCARB1-202ENST00000339570 SKAP2O75563 359 aaPredicted RBP17.49■□□□□ 0.39
SCARB1-202ENST00000339570 CCDC172P0C7W6 258 aa17.49■□□□□ 0.39
SCARB1-202ENST00000339570 EPHA7Q15375 998 aa17.49■□□□□ 0.39
SCARB1-202ENST00000339570 CBWD6Q4V339 395 aa17.49■□□□□ 0.39
SCARB1-202ENST00000339570 CBWD3Q5JTY5 395 aa17.49■□□□□ 0.39
SCARB1-202ENST00000339570 CBWD5Q5RIA9 395 aa17.49■□□□□ 0.39
SCARB1-202ENST00000339570 FAM196AQ6ZSG2 479 aa17.49■□□□□ 0.39
SCARB1-202ENST00000339570 LRRC34Q8IZ02 419 aa17.49■□□□□ 0.39
SCARB1-202ENST00000339570 MRRFQ96E11 262 aaKnown RBP17.49■□□□□ 0.39
SCARB1-202ENST00000339570 FAM84AQ96KN4 292 aa17.49■□□□□ 0.39
SCARB1-202ENST00000339570 TMEM59LQ9UK28 342 aa17.49■□□□□ 0.39
SCARB1-202ENST00000339570 ABCB11O95342 1321 aa17.48■□□□□ 0.39
SCARB1-202ENST00000339570 ESYT2A0FGR8 921 aa17.48■□□□□ 0.39
SCARB1-202ENST00000339570 CHUKO15111 745 aa17.48■□□□□ 0.39
SCARB1-202ENST00000339570 CFBP00751 764 aa17.48■□□□□ 0.39
SCARB1-202ENST00000339570 TNIP1Q15025 636 aa17.48■□□□□ 0.39
SCARB1-202ENST00000339570 SEPT14Q6ZU15 432 aa17.48■□□□□ 0.39
SCARB1-202ENST00000339570 CD302Q8IX05 232 aa17.48■□□□□ 0.39
SCARB1-202ENST00000339570 FUKQ8N0W3 1084 aa17.48■□□□□ 0.39
SCARB1-202ENST00000339570 KIF2BQ8N4N8 673 aa17.48■□□□□ 0.39
SCARB1-202ENST00000339570 ACTRT1Q8TDG2 376 aa17.48■□□□□ 0.39
SCARB1-202ENST00000339570 LMBR1Q8WVP7 490 aa17.48■□□□□ 0.39
SCARB1-202ENST00000339570 L3MBTL1Q9Y468 752 aa17.48■□□□□ 0.39
SCARB1-202ENST00000339570 TCRBV7S2A1N4TA0A589 114 aa17.48■□□□□ 0.39
SCARB1-202ENST00000339570 A6NNZ2 444 aa17.48■□□□□ 0.39
SCARB1-202ENST00000339570 TUBB8Q3ZCM7 444 aa17.48■□□□□ 0.39
SCARB1-202ENST00000339570 THRAP3Q9Y2W1 955 aaKnown RBP17.48■□□□□ 0.39
SCARB1-202ENST00000339570 EEF2P13639 858 aaKnown RBP17.47■□□□□ 0.39
SCARB1-202ENST00000339570 SEMA3FQ13275 785 aa17.47■□□□□ 0.39
SCARB1-202ENST00000339570 KIAA0825Q8IV33 1275 aa17.47■□□□□ 0.39
SCARB1-202ENST00000339570 CCDC105Q8IYK2 499 aa17.47■□□□□ 0.39
SCARB1-202ENST00000339570 BANK1Q8NDB2 785 aa17.47■□□□□ 0.39
SCARB1-202ENST00000339570 RABGAP1Q9Y3P9 1069 aa17.47■□□□□ 0.39
SCARB1-202ENST00000339570 ASTN1O14525 1302 aa17.47■□□□□ 0.39
SCARB1-202ENST00000339570 GJC1P36383 396 aa17.47■□□□□ 0.39
SCARB1-202ENST00000339570 XPO6Q96QU8 1125 aaKnown RBP17.47■□□□□ 0.39
SCARB1-202ENST00000339570 PAIP2Q9BPZ3 127 aaKnown RBP17.47■□□□□ 0.39
SCARB1-202ENST00000339570 KCNQ5Q9NR82 932 aa17.47■□□□□ 0.39
SCARB1-202ENST00000339570 INTS9Q9NV88 658 aaKnown RBP17.47■□□□□ 0.39
SCARB1-202ENST00000339570 GEMIN8Q9NWZ8 242 aaKnown RBP17.47■□□□□ 0.39
SCARB1-202ENST00000339570 PCNTO95613 3336 aa17.47■□□□□ 0.39
SCARB1-202ENST00000339570 CREB1P16220 341 aa17.47■□□□□ 0.39
SCARB1-202ENST00000339570 PMS2P54278 862 aa17.47■□□□□ 0.39
SCARB1-202ENST00000339570 BYSLQ13895 437 aaKnown RBP17.47■□□□□ 0.39
SCARB1-202ENST00000339570 NAA25Q14CX7 972 aa17.47■□□□□ 0.39
SCARB1-202ENST00000339570 SEPT2Q15019 361 aa17.47■□□□□ 0.39
SCARB1-202ENST00000339570 LONRF1Q17RB8 773 aa17.47■□□□□ 0.39
SCARB1-202ENST00000339570 C2CD6Q53TS8 623 aa17.47■□□□□ 0.39
SCARB1-202ENST00000339570 SLFN13Q68D06 897 aa17.47■□□□□ 0.39
SCARB1-202ENST00000339570 CHMP6Q96FZ7 201 aa17.47■□□□□ 0.39
SCARB1-202ENST00000339570 MYH7BA7E2Y1 1941 aa17.46■□□□□ 0.39
SCARB1-202ENST00000339570 GBP2P32456 591 aaPredicted RBP17.46■□□□□ 0.39
SCARB1-202ENST00000339570 SMTNP53814 917 aa17.46■□□□□ 0.39
SCARB1-202ENST00000339570 KAT5Q92993 513 aa17.46■□□□□ 0.39
SCARB1-202ENST00000339570 RNF25Q96BH1 459 aaPredicted RBP17.46■□□□□ 0.39
SCARB1-202ENST00000339570 SIX2Q9NPC8 291 aa17.46■□□□□ 0.39
SCARB1-202ENST00000339570 COG5Q9UP83 839 aa17.46■□□□□ 0.39
SCARB1-202ENST00000339570 KIAA1551Q9HCM1 1747 aa17.46■□□□□ 0.39
SCARB1-202ENST00000339570 GOLGA6L10A0A0M3HER8 536 aa17.46■□□□□ 0.39
SCARB1-202ENST00000339570 FOXN3O00409 490 aaPredicted RBP17.46■□□□□ 0.39
SCARB1-202ENST00000339570 EXOC3O60645 756 aa17.46■□□□□ 0.39
SCARB1-202ENST00000339570 RPS6KA4O75676 772 aa17.46■□□□□ 0.39
SCARB1-202ENST00000339570 SPATA31C1P0DKV0 1188 aa17.46■□□□□ 0.39
SCARB1-202ENST00000339570 MTMR3Q13615 1198 aa17.46■□□□□ 0.39
SCARB1-202ENST00000339570 ACCSLQ4AC99 568 aa17.46■□□□□ 0.39
SCARB1-202ENST00000339570 JAMLQ86YT9 394 aa17.46■□□□□ 0.39
SCARB1-202ENST00000339570 ERMNQ8TAM6 284 aa17.46■□□□□ 0.39
SCARB1-202ENST00000339570 PWWP2AQ96N64 755 aa17.46■□□□□ 0.39
SCARB1-202ENST00000339570 UBE2TQ9NPD8 197 aaPredicted RBP17.46■□□□□ 0.39
SCARB1-202ENST00000339570 ROBO3Q96MS0 1386 aa17.46■□□□□ 0.39
SCARB1-202ENST00000339570 BIRC3Q13489 604 aa17.46■□□□□ 0.38
SCARB1-202ENST00000339570 TRAPPC3LQ5T215 181 aa17.46■□□□□ 0.38
SCARB1-202ENST00000339570 SWT1Q5T5J6 900 aaKnown RBP17.46■□□□□ 0.38
SCARB1-202ENST00000339570 CCDC197Q8NCU1 140 aa17.46■□□□□ 0.38
SCARB1-202ENST00000339570 GOLGA8IPA6NC78 632 aa17.45■□□□□ 0.38
SCARB1-202ENST00000339570 GOLGA8JA6NMD2 632 aa17.45■□□□□ 0.38
SCARB1-202ENST00000339570 ANKRD63C9JTQ0 380 aa17.45■□□□□ 0.38
SCARB1-202ENST00000339570 RPL13P26373 211 aaKnown RBP17.45■□□□□ 0.38
SCARB1-202ENST00000339570 SSTR3P32745 418 aaPredicted RBP17.45■□□□□ 0.38
SCARB1-202ENST00000339570 CCDC174Q6PII3 467 aa17.45■□□□□ 0.38
SCARB1-202ENST00000339570 LRIG3Q6UXM1 1119 aa17.45■□□□□ 0.38
SCARB1-202ENST00000339570 FAM228AQ86W67 206 aa17.45■□□□□ 0.38
SCARB1-202ENST00000339570 SPATS2Q86XZ4 545 aaKnown RBP17.45■□□□□ 0.38
SCARB1-202ENST00000339570 NEK9Q8TD19 979 aa17.45■□□□□ 0.38
SCARB1-202ENST00000339570 DYDC2Q96IM9 177 aa17.45■□□□□ 0.38
SCARB1-202ENST00000339570 LBHD1Q9BQE6 289 aaPredicted RBP17.45■□□□□ 0.38
SCARB1-202ENST00000339570 CTNNAL1Q9UBT7 734 aa17.45■□□□□ 0.38
SCARB1-202ENST00000339570 PHLPP1O60346 1717 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms