RNA–Protein interactions for RNA: ENST00000338700.9

TRIM2-201, Transcript of tripartite motif containing 2, humanhuman

TSL 1 (best) BASIC

Gene TRIM2, Length 6,735 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2-201ENST00000338700 RNF219Q5W0B1 726 aaPredicted RBP8.29□□□□□ -1.08
TRIM2-201ENST00000338700 USP17L6PQ6QN14 398 aa8.29□□□□□ -1.08
TRIM2-201ENST00000338700 SPATS2Q86XZ4 545 aaKnown RBP8.29□□□□□ -1.08
TRIM2-201ENST00000338700 XXYLT1Q8NBI6 393 aa8.29□□□□□ -1.08
TRIM2-201ENST00000338700 MED4Q9NPJ6 270 aa8.29□□□□□ -1.08
TRIM2-201ENST00000338700 KIF13AQ9H1H9 1805 aa8.29□□□□□ -1.08
TRIM2-201ENST00000338700 ENC1O14682 589 aa8.29□□□□□ -1.08
TRIM2-201ENST00000338700 ORC4O43929 436 aa8.29□□□□□ -1.08
TRIM2-201ENST00000338700 ZBED1O96006 694 aa8.29□□□□□ -1.08
TRIM2-201ENST00000338700 SF3B3Q15393 1217 aaKnown RBP8.29□□□□□ -1.08
TRIM2-201ENST00000338700 KYAT1Q16773 422 aa8.29□□□□□ -1.08
TRIM2-201ENST00000338700 SFR1Q86XK3 245 aa8.29□□□□□ -1.08
TRIM2-201ENST00000338700 MCUQ8NE86 351 aa8.29□□□□□ -1.08
TRIM2-201ENST00000338700 HSPH1Q92598 858 aa8.29□□□□□ -1.08
TRIM2-201ENST00000338700 FAM84BQ96KN1 310 aaPredicted RBP8.29□□□□□ -1.08
TRIM2-201ENST00000338700 PANX2Q96RD6 677 aa8.29□□□□□ -1.08
TRIM2-201ENST00000338700 NUDCD1Q96RS6 583 aa8.29□□□□□ -1.08
TRIM2-201ENST00000338700 CAPS2Q9BXY5 557 aa8.29□□□□□ -1.08
TRIM2-201ENST00000338700 BARHL2Q9NY43 387 aa8.29□□□□□ -1.08
TRIM2-201ENST00000338700 STAT3P40763 770 aa8.29□□□□□ -1.08
TRIM2-201ENST00000338700 SWSAP1Q6NVH7 229 aa8.29□□□□□ -1.08
TRIM2-201ENST00000338700 RWDD4Q6NW29 188 aaKnown RBP8.29□□□□□ -1.08
TRIM2-201ENST00000338700 RHPN2Q8IUC4 686 aa8.29□□□□□ -1.08
TRIM2-201ENST00000338700 VSTM4Q8IW00 320 aa8.29□□□□□ -1.08
TRIM2-201ENST00000338700 SLC44A5Q8NCS7 719 aa8.29□□□□□ -1.08
TRIM2-201ENST00000338700 ZMAT2Q96NC0 199 aaKnown RBP8.29□□□□□ -1.08
TRIM2-201ENST00000338700 GABBR1Q9UBS5 961 aa8.29□□□□□ -1.08
TRIM2-201ENST00000338700 POLIQ9UNA4 740 aa8.29□□□□□ -1.08
TRIM2-201ENST00000338700 NMT2O60551 498 aa8.29□□□□□ -1.08
TRIM2-201ENST00000338700 EPHB4P54760 987 aa8.29□□□□□ -1.08
TRIM2-201ENST00000338700 PSMC5P62195 406 aa8.29□□□□□ -1.08
TRIM2-201ENST00000338700 GDAP1Q8TB36 358 aa8.29□□□□□ -1.08
TRIM2-201ENST00000338700 CHMP6Q96FZ7 201 aa8.29□□□□□ -1.08
TRIM2-201ENST00000338700 VCX3AQ9NNX9 186 aa8.29□□□□□ -1.08
TRIM2-201ENST00000338700 SEL1LQ9UBV2 794 aa8.29□□□□□ -1.08
TRIM2-201ENST00000338700 STK38LQ9Y2H1 464 aa8.29□□□□□ -1.08
TRIM2-201ENST00000338700 DIS3Q9Y2L1 958 aaKnown RBP8.29□□□□□ -1.08
TRIM2-201ENST00000338700 DEPDC5O75140 1603 aa8.29□□□□□ -1.08
TRIM2-201ENST00000338700 POTEMA6NI47 508 aa8.29□□□□□ -1.08
TRIM2-201ENST00000338700 TOB2Q14106 344 aaPredicted RBP8.29□□□□□ -1.08
TRIM2-201ENST00000338700 QRICH1Q2TAL8 776 aa8.29□□□□□ -1.08
TRIM2-201ENST00000338700 RABGGTAQ92696 567 aa8.29□□□□□ -1.08
TRIM2-201ENST00000338700 LRGUKQ96M69 825 aa8.29□□□□□ -1.08
TRIM2-201ENST00000338700 PLA2G12BQ9BX93 195 aa8.29□□□□□ -1.08
TRIM2-201ENST00000338700 MRPL4Q9BYD3 311 aaKnown RBP8.29□□□□□ -1.08
TRIM2-201ENST00000338700 ZWILCHQ9H900 591 aa8.29□□□□□ -1.08
TRIM2-201ENST00000338700 SLC16A4O15374 487 aa8.29□□□□□ -1.08
TRIM2-201ENST00000338700 TTI1O43156 1089 aa8.29□□□□□ -1.08
TRIM2-201ENST00000338700 FTCDO95954 541 aa8.29□□□□□ -1.08
TRIM2-201ENST00000338700 NR3C1P04150 777 aa8.29□□□□□ -1.08
TRIM2-201ENST00000338700 ATP1A2P50993 1020 aa8.29□□□□□ -1.08
TRIM2-201ENST00000338700 MYLK4Q86YV6 388 aaPredicted RBP8.29□□□□□ -1.08
TRIM2-201ENST00000338700 ZNF34Q8IZ26 560 aa8.29□□□□□ -1.08
TRIM2-201ENST00000338700 CEP120Q8N960 986 aa8.29□□□□□ -1.08
TRIM2-201ENST00000338700 DHX38Q92620 1227 aaKnown RBP8.29□□□□□ -1.08
TRIM2-201ENST00000338700 SDCCAG3Q96C92 435 aa8.29□□□□□ -1.08
TRIM2-201ENST00000338700 IRAK4Q9NWZ3 460 aa8.29□□□□□ -1.08
TRIM2-201ENST00000338700 PNPLA7Q6ZV29 1317 aa8.28□□□□□ -1.08
TRIM2-201ENST00000338700 PVALEFA0A1B0GWK0 134 aa8.28□□□□□ -1.08
TRIM2-201ENST00000338700 SNAP23O00161 211 aa8.28□□□□□ -1.08
TRIM2-201ENST00000338700 DPYSL4O14531 572 aa8.28□□□□□ -1.08
TRIM2-201ENST00000338700 SART1O43290 800 aaKnown RBP8.28□□□□□ -1.08
TRIM2-201ENST00000338700 SOX5P35711 763 aa8.28□□□□□ -1.08
TRIM2-201ENST00000338700 TRIM28Q13263 835 aaKnown RBP8.28□□□□□ -1.08
TRIM2-201ENST00000338700 CDO1Q16878 200 aa8.28□□□□□ -1.08
TRIM2-201ENST00000338700 PHLDB3Q6NSJ2 640 aa8.28□□□□□ -1.08
TRIM2-201ENST00000338700 MB21D2Q8IYB1 491 aaPredicted RBP8.28□□□□□ -1.08
TRIM2-201ENST00000338700 TTC39CQ8N584 583 aa8.28□□□□□ -1.08
TRIM2-201ENST00000338700 DEPDC1BQ8WUY9 529 aa8.28□□□□□ -1.08
TRIM2-201ENST00000338700 PPP1R12CQ9BZL4 782 aa8.28□□□□□ -1.08
TRIM2-201ENST00000338700 POLR3FQ9H1D9 316 aaPredicted RBP8.28□□□□□ -1.08
TRIM2-201ENST00000338700 EPB41L5Q9HCM4 733 aa8.28□□□□□ -1.08
TRIM2-201ENST00000338700 TMEM260Q9NX78 707 aa8.28□□□□□ -1.08
TRIM2-201ENST00000338700 MID2Q9UJV3 735 aa8.28□□□□□ -1.08
TRIM2-201ENST00000338700 DNAJC12Q9UKB3 198 aa8.28□□□□□ -1.08
TRIM2-201ENST00000338700 MAGED2Q9UNF1 606 aaPredicted RBP8.28□□□□□ -1.08
TRIM2-201ENST00000338700 SPDYE2BA6NHP3 402 aa8.28□□□□□ -1.08
TRIM2-201ENST00000338700 TTC36A6NLP5 189 aa8.28□□□□□ -1.08
TRIM2-201ENST00000338700 KIF3CO14782 793 aa8.28□□□□□ -1.08
TRIM2-201ENST00000338700 ZNF500O60304 480 aaPredicted RBP8.28□□□□□ -1.08
TRIM2-201ENST00000338700 SPDYE6P0CI01 402 aa8.28□□□□□ -1.08
TRIM2-201ENST00000338700 TBXAS1P24557 533 aaPredicted RBP8.28□□□□□ -1.08
TRIM2-201ENST00000338700 RWDD2BP57060 319 aa8.28□□□□□ -1.08
TRIM2-201ENST00000338700 SLMAPQ14BN4 828 aa8.28□□□□□ -1.08
TRIM2-201ENST00000338700 TOGARAM2Q6ZUX3 1019 aa8.28□□□□□ -1.08
TRIM2-201ENST00000338700 TMEM35BQ8NCS4 154 aa8.28□□□□□ -1.08
TRIM2-201ENST00000338700 DPF3Q92784 378 aa8.28□□□□□ -1.08
TRIM2-201ENST00000338700 CFAP36Q96G28 342 aa8.28□□□□□ -1.08
TRIM2-201ENST00000338700 ASNSD1Q9NWL6 643 aa8.28□□□□□ -1.08
TRIM2-201ENST00000338700 STRIP2Q9ULQ0 834 aa8.28□□□□□ -1.08
TRIM2-201ENST00000338700 GDAQ9Y2T3 454 aa8.28□□□□□ -1.08
TRIM2-201ENST00000338700 TTC4O95801 387 aa8.28□□□□□ -1.08
TRIM2-201ENST00000338700 PAMP19021 973 aa8.28□□□□□ -1.08
TRIM2-201ENST00000338700 RECQLP46063 649 aaPredicted RBP8.28□□□□□ -1.08
TRIM2-201ENST00000338700 USP11P51784 963 aa8.28□□□□□ -1.08
TRIM2-201ENST00000338700 PLTPP55058 493 aa8.28□□□□□ -1.08
TRIM2-201ENST00000338700 KRT33BQ14525 404 aa8.28□□□□□ -1.08
TRIM2-201ENST00000338700 KRT31Q15323 416 aa8.28□□□□□ -1.08
TRIM2-201ENST00000338700 DCLK2Q8N568 766 aa8.28□□□□□ -1.08
TRIM2-201ENST00000338700 NEDD1Q8NHV4 660 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms