RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 AMPD3Q01432 767 aa13.22□□□□□ -0.29
SPTLC1-202ENST00000337841 TMEM62Q0P6H9 643 aa13.22□□□□□ -0.29
SPTLC1-202ENST00000337841 PPIGQ13427 754 aaKnown RBP eCLIP13.22□□□□□ -0.29
SPTLC1-202ENST00000337841 TFDP1Q14186 410 aa13.22□□□□□ -0.29
SPTLC1-202ENST00000337841 MCM6Q14566 821 aa13.22□□□□□ -0.29
SPTLC1-202ENST00000337841 ODR4Q5SWX8 454 aa13.22□□□□□ -0.29
SPTLC1-202ENST00000337841 C1orf186Q6ZWK4 172 aa13.22□□□□□ -0.29
SPTLC1-202ENST00000337841 RHPN2Q8IUC4 686 aa13.22□□□□□ -0.29
SPTLC1-202ENST00000337841 FSIP1Q8NA03 581 aa13.22□□□□□ -0.29
SPTLC1-202ENST00000337841 MRPS27Q92552 414 aaKnown RBP13.22□□□□□ -0.29
SPTLC1-202ENST00000337841 KIFAP3Q92845 792 aa13.22□□□□□ -0.29
SPTLC1-202ENST00000337841 DHX58Q96C10 678 aa13.22□□□□□ -0.29
SPTLC1-202ENST00000337841 SCLT1Q96NL6 688 aa13.22□□□□□ -0.29
SPTLC1-202ENST00000337841 GBP4Q96PP9 640 aa13.22□□□□□ -0.29
SPTLC1-202ENST00000337841 USP25Q9UHP3 1055 aa13.22□□□□□ -0.29
SPTLC1-202ENST00000337841 GINS2Q9Y248 185 aa13.22□□□□□ -0.29
SPTLC1-202ENST00000337841 CDY2AQ9Y6F7 541 aa13.22□□□□□ -0.29
SPTLC1-202ENST00000337841 SQORQ9Y6N5 450 aa13.22□□□□□ -0.29
SPTLC1-202ENST00000337841 UMODL1Q5DID0 1318 aa13.21□□□□□ -0.29
SPTLC1-202ENST00000337841 A0A1B0GVL5 298 aa13.21□□□□□ -0.29
SPTLC1-202ENST00000337841 CHRNA1P02708 482 aa13.21□□□□□ -0.29
SPTLC1-202ENST00000337841 SRGAP2CP0DJJ0 459 aa13.21□□□□□ -0.29
SPTLC1-202ENST00000337841 PFKFB1P16118 471 aa13.21□□□□□ -0.29
SPTLC1-202ENST00000337841 GUCY2CP25092 1073 aa13.21□□□□□ -0.29
SPTLC1-202ENST00000337841 ITGB8P26012 769 aa13.21□□□□□ -0.29
SPTLC1-202ENST00000337841 ARL2P36404 184 aa13.21□□□□□ -0.29
SPTLC1-202ENST00000337841 SYKP43405 635 aa13.21□□□□□ -0.29
SPTLC1-202ENST00000337841 SLC12A3P55017 1021 aa13.21□□□□□ -0.29
SPTLC1-202ENST00000337841 FPGSQ05932 587 aa13.21□□□□□ -0.29
SPTLC1-202ENST00000337841 LAMTOR4Q0VGL1 99 aa13.21□□□□□ -0.29
SPTLC1-202ENST00000337841 CLEC17AQ6ZS10 378 aa13.21□□□□□ -0.29
SPTLC1-202ENST00000337841 FAM43BQ6ZT52 329 aaPredicted RBP13.21□□□□□ -0.29
SPTLC1-202ENST00000337841 GPBP1Q86WP2 473 aa13.21□□□□□ -0.29
SPTLC1-202ENST00000337841 CEP57L1Q8IYX8 460 aa13.21□□□□□ -0.29
SPTLC1-202ENST00000337841 USP38Q8NB14 1042 aa13.21□□□□□ -0.29
SPTLC1-202ENST00000337841 NLRP7Q8WX94 980 aa13.21□□□□□ -0.29
SPTLC1-202ENST00000337841 CCDC34Q96HJ3 373 aa13.21□□□□□ -0.29
SPTLC1-202ENST00000337841 SCLYQ96I15 445 aa13.21□□□□□ -0.29
SPTLC1-202ENST00000337841 IFT74Q96LB3 600 aa13.21□□□□□ -0.29
SPTLC1-202ENST00000337841 DRC1Q96MC2 740 aa13.21□□□□□ -0.29
SPTLC1-202ENST00000337841 GCOM2Q9BZD3 368 aaPredicted RBP13.21□□□□□ -0.29
SPTLC1-202ENST00000337841 INO80BQ9C086 356 aaPredicted RBP13.21□□□□□ -0.29
SPTLC1-202ENST00000337841 WNT8AQ9H1J5 351 aa13.21□□□□□ -0.29
SPTLC1-202ENST00000337841 XPNPEP1Q9NQW7 623 aa13.21□□□□□ -0.29
SPTLC1-202ENST00000337841 COL4A3BPQ9Y5P4 624 aa13.21□□□□□ -0.29
SPTLC1-202ENST00000337841 A0A087X0B3 334 aa13.2□□□□□ -0.3
SPTLC1-202ENST00000337841 FAM237AA0A1B0GTK4 181 aa13.2□□□□□ -0.3
SPTLC1-202ENST00000337841 GOLGA6L22H0YM25 854 aa13.2□□□□□ -0.3
SPTLC1-202ENST00000337841 GPR32O75388 356 aa13.2□□□□□ -0.3
SPTLC1-202ENST00000337841 PRPF40AO75400 957 aaKnown RBP13.2□□□□□ -0.3
SPTLC1-202ENST00000337841 PFKMP08237 780 aa13.2□□□□□ -0.3
SPTLC1-202ENST00000337841 CSF2RAP15509 400 aa13.2□□□□□ -0.3
SPTLC1-202ENST00000337841 GPC3P51654 580 aa13.2□□□□□ -0.3
SPTLC1-202ENST00000337841 MDM2Q00987 491 aaPredicted RBP13.2□□□□□ -0.3
SPTLC1-202ENST00000337841 POU5F1BQ06416 359 aa13.2□□□□□ -0.3
SPTLC1-202ENST00000337841 MGAT3Q09327 533 aa13.2□□□□□ -0.3
SPTLC1-202ENST00000337841 DRP2Q13474 957 aa13.2□□□□□ -0.3
SPTLC1-202ENST00000337841 PPP2R5AQ15172 486 aa13.2□□□□□ -0.3
SPTLC1-202ENST00000337841 KIZQ2M2Z5 673 aa13.2□□□□□ -0.3
SPTLC1-202ENST00000337841 NAALADL2Q58DX5 795 aa13.2□□□□□ -0.3
SPTLC1-202ENST00000337841 ZNF410Q86VK4 478 aa13.2□□□□□ -0.3
SPTLC1-202ENST00000337841 RUSC1Q9BVN2 902 aa13.2□□□□□ -0.3
SPTLC1-202ENST00000337841 POLR3FQ9H1D9 316 aaPredicted RBP13.2□□□□□ -0.3
SPTLC1-202ENST00000337841 ADAMTS10Q9H324 1103 aa13.2□□□□□ -0.3
SPTLC1-202ENST00000337841 MAGEF1Q9HAY2 307 aa13.2□□□□□ -0.3
SPTLC1-202ENST00000337841 IL23AQ9NPF7 189 aa13.2□□□□□ -0.3
SPTLC1-202ENST00000337841 HPSEQ9Y251 543 aa13.2□□□□□ -0.3
SPTLC1-202ENST00000337841 FGBP02675 491 aa13.19□□□□□ -0.3
SPTLC1-202ENST00000337841 SLFN14P0C7P3 912 aa13.19□□□□□ -0.3
SPTLC1-202ENST00000337841 ACTN1P12814 892 aa13.19□□□□□ -0.3
SPTLC1-202ENST00000337841 EIF4BP23588 611 aaKnown RBP13.19□□□□□ -0.3
SPTLC1-202ENST00000337841 PHKA2P46019 1235 aa13.19□□□□□ -0.3
SPTLC1-202ENST00000337841 NDUFA8P51970 172 aa13.19□□□□□ -0.3
SPTLC1-202ENST00000337841 E2F4Q16254 413 aa13.19□□□□□ -0.3
SPTLC1-202ENST00000337841 ARSHQ5FYA8 562 aa13.19□□□□□ -0.3
SPTLC1-202ENST00000337841 TRAF7Q6Q0C0 670 aa13.19□□□□□ -0.3
SPTLC1-202ENST00000337841 DEFB128Q7Z7B8 93 aa13.19□□□□□ -0.3
SPTLC1-202ENST00000337841 KSR1Q8IVT5 923 aa13.19□□□□□ -0.3
SPTLC1-202ENST00000337841 TMEM87AQ8NBN3 555 aa13.19□□□□□ -0.3
SPTLC1-202ENST00000337841 SEPT8Q92599 483 aa13.19□□□□□ -0.3
SPTLC1-202ENST00000337841 NLRP4Q96MN2 994 aa13.19□□□□□ -0.3
SPTLC1-202ENST00000337841 PPP1R16BQ96T49 567 aa13.19□□□□□ -0.3
SPTLC1-202ENST00000337841 TNMDQ9H2S6 317 aa13.19□□□□□ -0.3
SPTLC1-202ENST00000337841 C17orf75Q9HAS0 396 aa13.19□□□□□ -0.3
SPTLC1-202ENST00000337841 CDHR5Q9HBB8 845 aa13.19□□□□□ -0.3
SPTLC1-202ENST00000337841 GPRC5CQ9NQ84 441 aa13.19□□□□□ -0.3
SPTLC1-202ENST00000337841 SERTAD1Q9UHV2 236 aa13.19□□□□□ -0.3
SPTLC1-202ENST00000337841 A0A087WZ62 844 aa13.18□□□□□ -0.3
SPTLC1-202ENST00000337841 GPR182O15218 404 aa13.18□□□□□ -0.3
SPTLC1-202ENST00000337841 NBNO60934 754 aa13.18□□□□□ -0.3
SPTLC1-202ENST00000337841 HIP1RO75146 1068 aa13.18□□□□□ -0.3
SPTLC1-202ENST00000337841 RPS6KA5O75582 802 aa13.18□□□□□ -0.3
SPTLC1-202ENST00000337841 FAM13AO94988 1023 aa13.18□□□□□ -0.3
SPTLC1-202ENST00000337841 ZNF202O95125 648 aa13.18□□□□□ -0.3
SPTLC1-202ENST00000337841 DARSP14868 501 aaKnown RBP13.18□□□□□ -0.3
SPTLC1-202ENST00000337841 GLRA2P23416 452 aa13.18□□□□□ -0.3
SPTLC1-202ENST00000337841 MAGEA10P43363 369 aaPredicted RBP13.18□□□□□ -0.3
SPTLC1-202ENST00000337841 SMTNP53814 917 aa13.18□□□□□ -0.3
SPTLC1-202ENST00000337841 UBE2HP62256 183 aa13.18□□□□□ -0.3
SPTLC1-202ENST00000337841 NCBP1Q09161 790 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms