RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 FIS1Q9Y3D6 152 aa13.96□□□□□ -0.17
HLCS-201ENST00000336648 ATP6V0A4Q9HBG4 840 aa13.96□□□□□ -0.18
HLCS-201ENST00000336648 PPARGC1AQ9UBK2 798 aaKnown RBP13.96□□□□□ -0.18
HLCS-201ENST00000336648 CDV3Q9UKY7 258 aaKnown RBP13.96□□□□□ -0.18
HLCS-201ENST00000336648 CXCR5P32302 372 aa13.95□□□□□ -0.18
HLCS-201ENST00000336648 IREB2P48200 963 aaKnown RBP13.95□□□□□ -0.18
HLCS-201ENST00000336648 COPS2P61201 443 aa13.95□□□□□ -0.18
HLCS-201ENST00000336648 KIAA1755Q5JYT7 1200 aa13.95□□□□□ -0.18
HLCS-201ENST00000336648 TRIM72Q6ZMU5 477 aa13.95□□□□□ -0.18
HLCS-201ENST00000336648 TRMT2AQ8IZ69 625 aaKnown RBP13.95□□□□□ -0.18
HLCS-201ENST00000336648 RNF217Q8TC41 542 aa13.95□□□□□ -0.18
HLCS-201ENST00000336648 ACAP3Q96P50 834 aa13.95□□□□□ -0.18
HLCS-201ENST00000336648 COG4Q9H9E3 785 aa13.95□□□□□ -0.18
HLCS-201ENST00000336648 TBC1D22BQ9NU19 505 aa13.95□□□□□ -0.18
HLCS-201ENST00000336648 DNAJC17Q9NVM6 304 aaKnown RBP13.95□□□□□ -0.18
HLCS-201ENST00000336648 DDX56Q9NY93 547 aaKnown RBP13.95□□□□□ -0.18
HLCS-201ENST00000336648 DDIT3P35638 169 aa13.95□□□□□ -0.18
HLCS-201ENST00000336648 GOLGA8FQ08AF8 430 aa13.95□□□□□ -0.18
HLCS-201ENST00000336648 GOLGA8DPQ0D2H9 430 aa13.95□□□□□ -0.18
HLCS-201ENST00000336648 TBCCQ15814 346 aa13.95□□□□□ -0.18
HLCS-201ENST00000336648 PUS3Q9BZE2 481 aaKnown RBP13.95□□□□□ -0.18
HLCS-201ENST00000336648 OLA1Q9NTK5 396 aaKnown RBP13.95□□□□□ -0.18
HLCS-201ENST00000336648 FBXO2Q9UK22 296 aaPredicted RBP13.95□□□□□ -0.18
HLCS-201ENST00000336648 PFASO15067 1338 aa13.95□□□□□ -0.18
HLCS-201ENST00000336648 CHRNA3P32297 505 aa13.95□□□□□ -0.18
HLCS-201ENST00000336648 ADCY1Q08828 1119 aa13.95□□□□□ -0.18
HLCS-201ENST00000336648 MORF4L2Q15014 288 aa13.95□□□□□ -0.18
HLCS-201ENST00000336648 ITPRIPL1Q6GPH6 555 aa13.95□□□□□ -0.18
HLCS-201ENST00000336648 TTC8Q8TAM2 541 aa13.95□□□□□ -0.18
HLCS-201ENST00000336648 SNX19Q92543 992 aa13.95□□□□□ -0.18
HLCS-201ENST00000336648 PRKAG2Q9UGJ0 569 aa13.95□□□□□ -0.18
HLCS-201ENST00000336648 NFU1Q9UMS0 254 aa13.95□□□□□ -0.18
HLCS-201ENST00000336648 IGSF1Q8N6C5 1336 aa13.95□□□□□ -0.18
HLCS-201ENST00000336648 RFX7Q2KHR2 1363 aa13.95□□□□□ -0.18
HLCS-201ENST00000336648 FAM170AA1A519 330 aa13.95□□□□□ -0.18
HLCS-201ENST00000336648 CFAP73A6NFT4 308 aa13.95□□□□□ -0.18
HLCS-201ENST00000336648 DNAJC6O75061 913 aa13.95□□□□□ -0.18
HLCS-201ENST00000336648 RECQLP46063 649 aaPredicted RBP13.95□□□□□ -0.18
HLCS-201ENST00000336648 AP3M2P53677 418 aa13.95□□□□□ -0.18
HLCS-201ENST00000336648 LRRC31Q6UY01 552 aa13.95□□□□□ -0.18
HLCS-201ENST00000336648 SPICE1Q8N0Z3 855 aa13.95□□□□□ -0.18
HLCS-201ENST00000336648 FAM20AQ96MK3 541 aa13.95□□□□□ -0.18
HLCS-201ENST00000336648 ASPSCR1Q9BZE9 553 aa13.95□□□□□ -0.18
HLCS-201ENST00000336648 DNAJC12Q9UKB3 198 aa13.95□□□□□ -0.18
HLCS-201ENST00000336648 KRT7P08729 469 aa13.95□□□□□ -0.18
HLCS-201ENST00000336648 CD58P19256 250 aa13.95□□□□□ -0.18
HLCS-201ENST00000336648 SERPINB10P48595 397 aa13.95□□□□□ -0.18
HLCS-201ENST00000336648 KRT33BQ14525 404 aa13.95□□□□□ -0.18
HLCS-201ENST00000336648 ARHGAP27Q6ZUM4 889 aa13.95□□□□□ -0.18
HLCS-201ENST00000336648 ZBTB33Q86T24 672 aa13.95□□□□□ -0.18
HLCS-201ENST00000336648 ZNF589Q86UQ0 364 aaPredicted RBP13.95□□□□□ -0.18
HLCS-201ENST00000336648 LCORLQ8N3X6 602 aa13.95□□□□□ -0.18
HLCS-201ENST00000336648 NCLNQ969V3 563 aa13.95□□□□□ -0.18
HLCS-201ENST00000336648 COA1Q9GZY4 146 aa13.95□□□□□ -0.18
HLCS-201ENST00000336648 CNOT8Q9UFF9 292 aaKnown RBP13.95□□□□□ -0.18
HLCS-201ENST00000336648 E2F6O75461 281 aa13.94□□□□□ -0.18
HLCS-201ENST00000336648 TAP1Q03518 808 aa13.94□□□□□ -0.18
HLCS-201ENST00000336648 NR5A1Q13285 461 aa13.94□□□□□ -0.18
HLCS-201ENST00000336648 KYAT1Q16773 422 aa13.94□□□□□ -0.18
HLCS-201ENST00000336648 NAALADL2Q58DX5 795 aa13.94□□□□□ -0.18
HLCS-201ENST00000336648 XXYLT1Q8NBI6 393 aa13.94□□□□□ -0.18
HLCS-201ENST00000336648 NAF1Q96HR8 494 aaKnown RBP13.94□□□□□ -0.18
HLCS-201ENST00000336648 ZFP69BQ9UJL9 534 aa13.94□□□□□ -0.18
HLCS-201ENST00000336648 ARHGAP26Q9UNA1 814 aa13.94□□□□□ -0.18
HLCS-201ENST00000336648 ATP11BQ9Y2G3 1177 aa13.94□□□□□ -0.18
HLCS-201ENST00000336648 hCG_2014768A0A024R1R8 64 aa13.94□□□□□ -0.18
HLCS-201ENST00000336648 RASA4BC9J798 803 aa13.94□□□□□ -0.18
HLCS-201ENST00000336648 RASA4O43374 803 aa13.94□□□□□ -0.18
HLCS-201ENST00000336648 DEAF1O75398 565 aaPredicted RBP13.94□□□□□ -0.18
HLCS-201ENST00000336648 HAUS5O94927 633 aa13.94□□□□□ -0.18
HLCS-201ENST00000336648 PNMA6AP0CW24 399 aaPredicted RBP13.94□□□□□ -0.18
HLCS-201ENST00000336648 GPR162Q16538 588 aa13.94□□□□□ -0.18
HLCS-201ENST00000336648 ANO5Q75V66 913 aa13.94□□□□□ -0.18
HLCS-201ENST00000336648 EPM2AIP1Q7L775 607 aaPredicted RBP13.94□□□□□ -0.18
HLCS-201ENST00000336648 TBC1D1Q86TI0 1168 aaPredicted RBP13.94□□□□□ -0.18
HLCS-201ENST00000336648 CATSPER1Q8NEC5 780 aa13.94□□□□□ -0.18
HLCS-201ENST00000336648 PLEKHF1Q96S99 279 aa13.94□□□□□ -0.18
HLCS-201ENST00000336648 AP1M1Q9BXS5 423 aa13.94□□□□□ -0.18
HLCS-201ENST00000336648 C2orf40Q9H1Z8 148 aa13.94□□□□□ -0.18
HLCS-201ENST00000336648 KLHL8Q9P2G9 620 aaPredicted RBP13.94□□□□□ -0.18
HLCS-201ENST00000336648 STAP1Q9ULZ2 295 aa13.94□□□□□ -0.18
HLCS-201ENST00000336648 ADAMTS12P58397 1594 aa13.94□□□□□ -0.18
HLCS-201ENST00000336648 KIF21AQ7Z4S6 1674 aa13.94□□□□□ -0.18
HLCS-201ENST00000336648 MEIS1O00470 390 aa13.94□□□□□ -0.18
HLCS-201ENST00000336648 SLC4A1P02730 911 aa13.94□□□□□ -0.18
HLCS-201ENST00000336648 SERPINB4P48594 390 aa13.94□□□□□ -0.18
HLCS-201ENST00000336648 AP2B1P63010 937 aa13.94□□□□□ -0.18
HLCS-201ENST00000336648 TRIP13Q15645 432 aaPredicted RBP13.94□□□□□ -0.18
HLCS-201ENST00000336648 NOP9Q86U38 636 aaKnown RBP13.94□□□□□ -0.18
HLCS-201ENST00000336648 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.94□□□□□ -0.18
HLCS-201ENST00000336648 COA7Q96BR5 231 aa13.94□□□□□ -0.18
HLCS-201ENST00000336648 TRPV6Q9H1D0 765 aa13.94□□□□□ -0.18
HLCS-201ENST00000336648 ADAMTS1Q9UHI8 967 aa13.94□□□□□ -0.18
HLCS-201ENST00000336648 AP3B1O00203 1094 aa13.94□□□□□ -0.18
HLCS-201ENST00000336648 DYNLL1P63167 89 aaKnown RBP13.94□□□□□ -0.18
HLCS-201ENST00000336648 CACNB1Q02641 598 aaPredicted RBP13.94□□□□□ -0.18
HLCS-201ENST00000336648 TADA2BQ86TJ2 420 aa13.94□□□□□ -0.18
HLCS-201ENST00000336648 ELAC2Q9BQ52 826 aaKnown RBP13.94□□□□□ -0.18
HLCS-201ENST00000336648 EDEM3Q9BZQ6 932 aa13.94□□□□□ -0.18
HLCS-201ENST00000336648 ZSWIM5Q9P217 1185 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms