RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 TMEM247A6NEH6 219 aa10.45□□□□□ -0.74
COL4A6-201ENST00000334504 LRRC53A6NM62 1247 aa10.45□□□□□ -0.74
COL4A6-201ENST00000334504 NEURL1BA8MQ27 555 aa10.45□□□□□ -0.74
COL4A6-201ENST00000334504 FGFR4P22455 802 aa10.45□□□□□ -0.74
COL4A6-201ENST00000334504 CDO1Q16878 200 aa10.45□□□□□ -0.74
COL4A6-201ENST00000334504 KIF2BQ8N4N8 673 aa10.45□□□□□ -0.74
COL4A6-201ENST00000334504 ZNF555Q8NEP9 628 aa10.45□□□□□ -0.74
COL4A6-201ENST00000334504 TEKT4Q8WW24 435 aa10.45□□□□□ -0.74
COL4A6-201ENST00000334504 APOL6Q9BWW8 343 aa10.45□□□□□ -0.74
COL4A6-201ENST00000334504 KMT5AQ9NQR1 393 aa10.45□□□□□ -0.74
COL4A6-201ENST00000334504 CDV3Q9UKY7 258 aaKnown RBP10.45□□□□□ -0.74
COL4A6-201ENST00000334504 NCAPHQ15003 741 aa10.45□□□□□ -0.74
COL4A6-201ENST00000334504 DEPDC1Q5TB30 811 aa10.45□□□□□ -0.74
COL4A6-201ENST00000334504 LRRC8BQ6P9F7 803 aa10.45□□□□□ -0.74
COL4A6-201ENST00000334504 B4GALNT2Q8NHY0 566 aa10.45□□□□□ -0.74
COL4A6-201ENST00000334504 OSBPL5Q9H0X9 879 aaPredicted RBP10.45□□□□□ -0.74
COL4A6-201ENST00000334504 DIABLOQ9NR28 239 aa10.45□□□□□ -0.74
COL4A6-201ENST00000334504 ZSCAN9O15535 394 aaPredicted RBP10.45□□□□□ -0.74
COL4A6-201ENST00000334504 BAG6P46379 1132 aa10.45□□□□□ -0.74
COL4A6-201ENST00000334504 TBCCQ15814 346 aa10.45□□□□□ -0.74
COL4A6-201ENST00000334504 DPY19L2Q6NUT2 758 aa10.45□□□□□ -0.74
COL4A6-201ENST00000334504 FRA10AC1Q70Z53 315 aa10.45□□□□□ -0.74
COL4A6-201ENST00000334504 SZRD1Q7Z422 152 aa10.45□□□□□ -0.74
COL4A6-201ENST00000334504 GALNT4Q8N4A0 578 aa10.45□□□□□ -0.74
COL4A6-201ENST00000334504 SLC17A8Q8NDX2 589 aa10.45□□□□□ -0.74
COL4A6-201ENST00000334504 PBXIP1Q96AQ6 731 aa10.45□□□□□ -0.74
COL4A6-201ENST00000334504 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.45□□□□□ -0.74
COL4A6-201ENST00000334504 RNF26Q9BY78 433 aaPredicted RBP10.45□□□□□ -0.74
COL4A6-201ENST00000334504 USP40Q9NVE5 1235 aa10.45□□□□□ -0.74
COL4A6-201ENST00000334504 CEP72Q9P209 647 aa10.45□□□□□ -0.74
COL4A6-201ENST00000334504 SEPT3Q9UH03 358 aa10.45□□□□□ -0.74
COL4A6-201ENST00000334504 SEMA3EO15041 775 aa10.45□□□□□ -0.74
COL4A6-201ENST00000334504 KRT26Q7Z3Y9 468 aa10.45□□□□□ -0.74
COL4A6-201ENST00000334504 AGR3Q8TD06 166 aa10.45□□□□□ -0.74
COL4A6-201ENST00000334504 CCT7Q99832 543 aa10.45□□□□□ -0.74
COL4A6-201ENST00000334504 ASPSCR1Q9BZE9 553 aa10.45□□□□□ -0.74
COL4A6-201ENST00000334504 CNGB3Q9NQW8 809 aa10.45□□□□□ -0.74
COL4A6-201ENST00000334504 PTPREP23469 700 aa10.44□□□□□ -0.74
COL4A6-201ENST00000334504 PDIA2Q13087 525 aaKnown RBP10.44□□□□□ -0.74
COL4A6-201ENST00000334504 DMC1Q14565 340 aa10.44□□□□□ -0.74
COL4A6-201ENST00000334504 RESP18Q5W5W9 173 aa10.44□□□□□ -0.74
COL4A6-201ENST00000334504 NAIF1Q69YI7 327 aaPredicted RBP10.44□□□□□ -0.74
COL4A6-201ENST00000334504 ZNF589Q86UQ0 364 aaPredicted RBP10.44□□□□□ -0.74
COL4A6-201ENST00000334504 CNBD1Q8NA66 436 aa10.44□□□□□ -0.74
COL4A6-201ENST00000334504 VPS39Q96JC1 886 aa10.44□□□□□ -0.74
COL4A6-201ENST00000334504 ANAPC7Q9UJX3 599 aa10.44□□□□□ -0.74
COL4A6-201ENST00000334504 USP21Q9UK80 565 aa10.44□□□□□ -0.74
COL4A6-201ENST00000334504 MIF4GDA9UHW6 222 aaKnown RBP10.44□□□□□ -0.74
COL4A6-201ENST00000334504 SNX2O60749 519 aa10.44□□□□□ -0.74
COL4A6-201ENST00000334504 PAMP19021 973 aa10.44□□□□□ -0.74
COL4A6-201ENST00000334504 IFNA8P32881 189 aa10.44□□□□□ -0.74
COL4A6-201ENST00000334504 DEFA1P59665 94 aa10.44□□□□□ -0.74
COL4A6-201ENST00000334504 DEFA3P59666 94 aa10.44□□□□□ -0.74
COL4A6-201ENST00000334504 MAP3K10Q02779 954 aa10.44□□□□□ -0.74
COL4A6-201ENST00000334504 LAMB3Q13751 1172 aa10.44□□□□□ -0.74
COL4A6-201ENST00000334504 CDR2LQ86X02 465 aaPredicted RBP10.44□□□□□ -0.74
COL4A6-201ENST00000334504 ZBED8Q8IZ13 594 aa10.44□□□□□ -0.74
COL4A6-201ENST00000334504 SNF8Q96H20 258 aa10.44□□□□□ -0.74
COL4A6-201ENST00000334504 CARD9Q9H257 536 aa10.44□□□□□ -0.74
COL4A6-201ENST00000334504 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.44□□□□□ -0.74
COL4A6-201ENST00000334504 A1BGP04217 495 aa10.44□□□□□ -0.74
COL4A6-201ENST00000334504 CYP21A2P08686 494 aa10.44□□□□□ -0.74
COL4A6-201ENST00000334504 MLH1P40692 756 aa10.44□□□□□ -0.74
COL4A6-201ENST00000334504 CORO7P57737 925 aa10.44□□□□□ -0.74
COL4A6-201ENST00000334504 Q3C1V9 767 aa10.44□□□□□ -0.74
COL4A6-201ENST00000334504 TJAP1Q5JTD0 557 aa10.44□□□□□ -0.74
COL4A6-201ENST00000334504 PPP1R36Q96LQ0 422 aa10.44□□□□□ -0.74
COL4A6-201ENST00000334504 COQ7Q99807 217 aa10.44□□□□□ -0.74
COL4A6-201ENST00000334504 WWP1Q9H0M0 922 aa10.44□□□□□ -0.74
COL4A6-201ENST00000334504 GOLPH3LQ9H4A5 285 aa10.44□□□□□ -0.74
COL4A6-201ENST00000334504 TMEM206Q9H813 350 aa10.44□□□□□ -0.74
COL4A6-201ENST00000334504 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.44□□□□□ -0.74
COL4A6-201ENST00000334504 NPHS2Q9NP85 383 aa10.44□□□□□ -0.74
COL4A6-201ENST00000334504 NOC2LQ9Y3T9 749 aaKnown RBP10.44□□□□□ -0.74
COL4A6-201ENST00000334504 ADGRG1Q9Y653 693 aa10.44□□□□□ -0.74
COL4A6-201ENST00000334504 TRIM49BA6NDI0 452 aa10.44□□□□□ -0.74
COL4A6-201ENST00000334504 COPB2P35606 906 aa10.44□□□□□ -0.74
COL4A6-201ENST00000334504 MXI1P50539 228 aa10.44□□□□□ -0.74
COL4A6-201ENST00000334504 UBXN2AP68543 259 aa10.44□□□□□ -0.74
COL4A6-201ENST00000334504 IGBP1P78318 339 aa10.44□□□□□ -0.74
COL4A6-201ENST00000334504 IMPG1Q17R60 797 aa10.44□□□□□ -0.74
COL4A6-201ENST00000334504 DHX40Q8IX18 779 aaKnown RBP10.44□□□□□ -0.74
COL4A6-201ENST00000334504 EXOC8Q8IYI6 725 aa10.44□□□□□ -0.74
COL4A6-201ENST00000334504 TBCKQ8TEA7 893 aa10.44□□□□□ -0.74
COL4A6-201ENST00000334504 UTP6Q9NYH9 597 aaKnown RBP10.44□□□□□ -0.74
COL4A6-201ENST00000334504 NXF1Q9UBU9 619 aaKnown RBP10.44□□□□□ -0.74
COL4A6-201ENST00000334504 GDAQ9Y2T3 454 aa10.44□□□□□ -0.74
COL4A6-201ENST00000334504 USP15Q9Y4E8 981 aaPredicted RBP10.44□□□□□ -0.74
COL4A6-201ENST00000334504 SYNDIG1LA6NDD5 238 aa10.44□□□□□ -0.74
COL4A6-201ENST00000334504 XPAP23025 273 aaPredicted RBP10.44□□□□□ -0.74
COL4A6-201ENST00000334504 LRRC63Q05C16 580 aa10.44□□□□□ -0.74
COL4A6-201ENST00000334504 TRIM16LQ309B1 348 aa10.44□□□□□ -0.74
COL4A6-201ENST00000334504 SCARA5Q6ZMJ2 495 aa10.44□□□□□ -0.74
COL4A6-201ENST00000334504 LRRC1Q9BTT6 524 aa10.44□□□□□ -0.74
COL4A6-201ENST00000334504 USP44Q9H0E7 712 aa10.44□□□□□ -0.74
COL4A6-201ENST00000334504 YTHDC2Q9H6S0 1430 aaKnown RBP10.44□□□□□ -0.74
COL4A6-201ENST00000334504 LGALS16A8MUM7 142 aa10.44□□□□□ -0.74
COL4A6-201ENST00000334504 CRYMQ14894 314 aa10.44□□□□□ -0.74
COL4A6-201ENST00000334504 BPIFA3Q9BQP9 254 aa10.44□□□□□ -0.74
COL4A6-201ENST00000334504 RNPEPQ9H4A4 650 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms