RNA–Protein interactions for RNA: ENST00000331728.8

LIMK2-201, Transcript of LIM domain kinase 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIMK2, Length 3,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-201ENST00000331728 PAEPP09466 180 aa9.44□□□□□ -0.9
LIMK2-201ENST00000331728 SCP2P22307 547 aa9.44□□□□□ -0.9
LIMK2-201ENST00000331728 ECHS1P30084 290 aa9.44□□□□□ -0.9
LIMK2-201ENST00000331728 CASP5P51878 434 aa9.44□□□□□ -0.9
LIMK2-201ENST00000331728 ICA1Q05084 483 aa9.44□□□□□ -0.9
LIMK2-201ENST00000331728 MESDQ14696 234 aa9.44□□□□□ -0.9
LIMK2-201ENST00000331728 SLC35G2Q8TBE7 412 aa9.44□□□□□ -0.9
LIMK2-201ENST00000331728 TEKT1Q969V4 418 aa9.44□□□□□ -0.9
LIMK2-201ENST00000331728 KCTD10Q9H3F6 313 aa9.44□□□□□ -0.9
LIMK2-201ENST00000331728 KCNK9Q9NPC2 374 aa9.44□□□□□ -0.9
LIMK2-201ENST00000331728 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.44□□□□□ -0.94e-6■■■■■ 105.2
LIMK2-201ENST00000331728 CNOT8Q9UFF9 292 aaKnown RBP9.44□□□□□ -0.9
LIMK2-201ENST00000331728 DIS3Q9Y2L1 958 aaKnown RBP9.44□□□□□ -0.9
LIMK2-201ENST00000331728 MYH4Q9Y623 1939 aa9.44□□□□□ -0.9
LIMK2-201ENST00000331728 ARHGEF35A5YM69 484 aa9.44□□□□□ -0.9
LIMK2-201ENST00000331728 RSPH10B2B2RC85 870 aa9.44□□□□□ -0.9
LIMK2-201ENST00000331728 CFBP00751 764 aa9.44□□□□□ -0.9
LIMK2-201ENST00000331728 RSPH10BP0C881 870 aa9.44□□□□□ -0.9
LIMK2-201ENST00000331728 TRIM49P0CI25 452 aa9.44□□□□□ -0.9
LIMK2-201ENST00000331728 TRIM49CP0CI26 452 aa9.44□□□□□ -0.9
LIMK2-201ENST00000331728 GHRP10912 638 aa9.44□□□□□ -0.9
LIMK2-201ENST00000331728 COPB2P35606 906 aa9.44□□□□□ -0.9
LIMK2-201ENST00000331728 PMS2P54278 862 aa9.44□□□□□ -0.9
LIMK2-201ENST00000331728 MARSP56192 900 aaKnown RBP9.44□□□□□ -0.9
LIMK2-201ENST00000331728 GIT2Q14161 759 aa9.44□□□□□ -0.9
LIMK2-201ENST00000331728 CTTNQ14247 550 aaKnown RBP9.44□□□□□ -0.9
LIMK2-201ENST00000331728 CERKLQ49MI3 558 aaPredicted RBP9.44□□□□□ -0.9
LIMK2-201ENST00000331728 HIBCHQ6NVY1 386 aaPredicted RBP9.44□□□□□ -0.9
LIMK2-201ENST00000331728 MAEAQ7L5Y9 396 aa9.44□□□□□ -0.9
LIMK2-201ENST00000331728 CCDC63Q8NA47 563 aa9.44□□□□□ -0.9
LIMK2-201ENST00000331728 MDM1Q8TC05 714 aa9.44□□□□□ -0.9
LIMK2-201ENST00000331728 SNED1Q8TER0 1413 aa9.44□□□□□ -0.9
LIMK2-201ENST00000331728 MIEF2Q96C03 454 aa9.44□□□□□ -0.9
LIMK2-201ENST00000331728 C8orf37Q96NL8 207 aa9.44□□□□□ -0.9
LIMK2-201ENST00000331728 XPO6Q96QU8 1125 aaKnown RBP9.44□□□□□ -0.9
LIMK2-201ENST00000331728 KDM4CQ9H3R0 1056 aa9.44□□□□□ -0.9
LIMK2-201ENST00000331728 PARVGQ9HBI0 331 aa9.44□□□□□ -0.9
LIMK2-201ENST00000331728 TMOD4Q9NZQ9 345 aa9.44□□□□□ -0.9
LIMK2-201ENST00000331728 FAM196BA6NMK8 535 aa9.43□□□□□ -0.9
LIMK2-201ENST00000331728 BTNL10A8MVZ5 291 aa9.43□□□□□ -0.9
LIMK2-201ENST00000331728 SLC26A4O43511 780 aa9.43□□□□□ -0.9
LIMK2-201ENST00000331728 HOXA13P31271 388 aaPredicted RBP9.43□□□□□ -0.9
LIMK2-201ENST00000331728 RHBDL3P58872 404 aa9.43□□□□□ -0.9
LIMK2-201ENST00000331728 XRCC4Q13426 336 aa9.43□□□□□ -0.9
LIMK2-201ENST00000331728 SPRED3Q2MJR0 410 aa9.43□□□□□ -0.9
LIMK2-201ENST00000331728 ODR4Q5SWX8 454 aa9.43□□□□□ -0.9
LIMK2-201ENST00000331728 RC3H1Q5TC82 1133 aaKnown RBP9.43□□□□□ -0.9
LIMK2-201ENST00000331728 FAM196AQ6ZSG2 479 aa9.43□□□□□ -0.9
LIMK2-201ENST00000331728 IRF2BP2Q7Z5L9 587 aa9.43□□□□□ -0.9
LIMK2-201ENST00000331728 TMC3Q7Z5M5 1100 aa9.43□□□□□ -0.9
LIMK2-201ENST00000331728 NEUROG2Q9H2A3 272 aa9.43□□□□□ -0.9
LIMK2-201ENST00000331728 AZI2Q9H6S1 392 aa9.43□□□□□ -0.9
LIMK2-201ENST00000331728 OSGEPQ9NPF4 335 aa9.43□□□□□ -0.9
LIMK2-201ENST00000331728 ASIC3Q9UHC3 531 aa9.43□□□□□ -0.9
LIMK2-201ENST00000331728 INTUQ9ULD6 942 aa9.43□□□□□ -0.9
LIMK2-201ENST00000331728 LAMB1P07942 1786 aa9.43□□□□□ -0.9
LIMK2-201ENST00000331728 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.43□□□□□ -0.9
LIMK2-201ENST00000331728 FAM187AA6NFU0 413 aa9.43□□□□□ -0.9
LIMK2-201ENST00000331728 F8VZ95 297 aa9.43□□□□□ -0.9
LIMK2-201ENST00000331728 GAS7O60861 476 aa9.43□□□□□ -0.9
LIMK2-201ENST00000331728 DNAJC8O75937 253 aaPredicted RBP9.43□□□□□ -0.9
LIMK2-201ENST00000331728 HSPA6P17066 643 aa9.43□□□□□ -0.9
LIMK2-201ENST00000331728 RPA1P27694 616 aa9.43□□□□□ -0.9
LIMK2-201ENST00000331728 NMT1P30419 496 aaKnown RBP9.43□□□□□ -0.9
LIMK2-201ENST00000331728 PSMC6P62333 389 aa9.43□□□□□ -0.9
LIMK2-201ENST00000331728 SYT2Q8N9I0 419 aaPredicted RBP9.43□□□□□ -0.9
LIMK2-201ENST00000331728 FAM20AQ96MK3 541 aa9.43□□□□□ -0.9
LIMK2-201ENST00000331728 ATP6V0A4Q9HBG4 840 aa9.43□□□□□ -0.9
LIMK2-201ENST00000331728 RGL1Q9NZL6 768 aa9.43□□□□□ -0.9
LIMK2-201ENST00000331728 TRAF3IP3Q9Y228 551 aa9.43□□□□□ -0.9
LIMK2-201ENST00000331728 PTPN22Q9Y2R2 807 aa9.43□□□□□ -0.9
LIMK2-201ENST00000331728 DDX3XO00571 662 aaKnown RBP eCLIP9.43□□□□□ -0.91e-6■■■□□ 16.8
LIMK2-201ENST00000331728 CLTAP09496 248 aa9.43□□□□□ -0.9
LIMK2-201ENST00000331728 TMEM253P0C7T8 217 aa9.43□□□□□ -0.9
LIMK2-201ENST00000331728 DRD4P21917 467 aa9.43□□□□□ -0.9
LIMK2-201ENST00000331728 GBP1P32455 592 aa9.43□□□□□ -0.9
LIMK2-201ENST00000331728 SSR1P43307 286 aaKnown RBP9.43□□□□□ -0.9
LIMK2-201ENST00000331728 EPHA7Q15375 998 aa9.43□□□□□ -0.9
LIMK2-201ENST00000331728 DOK7Q18PE1 504 aa9.43□□□□□ -0.9
LIMK2-201ENST00000331728 FAM182BQ5T319 152 aa9.43□□□□□ -0.9
LIMK2-201ENST00000331728 LRCH2Q5VUJ6 765 aa9.43□□□□□ -0.9
LIMK2-201ENST00000331728 SLC51AQ86UW1 340 aa9.43□□□□□ -0.9
LIMK2-201ENST00000331728 RHOT2Q8IXI1 618 aa9.43□□□□□ -0.9
LIMK2-201ENST00000331728 TCP11Q8WWU5 503 aa9.43□□□□□ -0.9
LIMK2-201ENST00000331728 INTS2Q9H0H0 1204 aaKnown RBP9.43□□□□□ -0.9
LIMK2-201ENST00000331728 HOMER3Q9NSC5 361 aa9.43□□□□□ -0.9
LIMK2-201ENST00000331728 CD2APQ9Y5K6 639 aa9.43□□□□□ -0.9
LIMK2-201ENST00000331728 SYNGAP1Q96PV0 1343 aa9.42□□□□□ -0.9
LIMK2-201ENST00000331728 NHSL1Q5SYE7 1610 aa9.42□□□□□ -0.9
LIMK2-201ENST00000331728 A0A0A6YYK5 440 aaPredicted RBP9.42□□□□□ -0.9
LIMK2-201ENST00000331728 BBOX1O75936 387 aa9.42□□□□□ -0.9
LIMK2-201ENST00000331728 TRIM37O94972 964 aa9.42□□□□□ -0.9
LIMK2-201ENST00000331728 EEF2P13639 858 aaKnown RBP9.42□□□□□ -0.9
LIMK2-201ENST00000331728 PRKCIP41743 596 aa9.42□□□□□ -0.9
LIMK2-201ENST00000331728 ADCY2Q08462 1091 aa9.42□□□□□ -0.9
LIMK2-201ENST00000331728 BYSLQ13895 437 aaKnown RBP9.42□□□□□ -0.9
LIMK2-201ENST00000331728 CRYMQ14894 314 aa9.42□□□□□ -0.9
LIMK2-201ENST00000331728 NAA25Q14CX7 972 aa9.42□□□□□ -0.9
LIMK2-201ENST00000331728 TNIP1Q15025 636 aa9.42□□□□□ -0.9
LIMK2-201ENST00000331728 KIAA1755Q5JYT7 1200 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms