RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 TMEM143Q96AN5 459 aa17.82■□□□□ 0.44
LRRC28-202ENST00000331450 GPRC5CQ9NQ84 441 aa17.82■□□□□ 0.44
LRRC28-202ENST00000331450 KBTBD4Q9NVX7 518 aa17.82■□□□□ 0.44
LRRC28-202ENST00000331450 PCDH10Q9P2E7 1040 aa17.82■□□□□ 0.44
LRRC28-202ENST00000331450 SUCLA2Q9P2R7 463 aaPredicted RBP17.82■□□□□ 0.44
LRRC28-202ENST00000331450 ZMYND8Q9ULU4 1186 aaPredicted RBP17.82■□□□□ 0.44
LRRC28-202ENST00000331450 NR2E3Q9Y5X4 410 aa17.82■□□□□ 0.44
LRRC28-202ENST00000331450 CDY2AQ9Y6F7 541 aa17.82■□□□□ 0.44
LRRC28-202ENST00000331450 GPR32O75388 356 aa17.81■□□□□ 0.44
LRRC28-202ENST00000331450 SSBP05455 408 aaKnown RBP eCLIP17.81■□□□□ 0.44
LRRC28-202ENST00000331450 CTSHP09668 335 aa17.81■□□□□ 0.44
LRRC28-202ENST00000331450 IQCF3P0C7M6 154 aa17.81■□□□□ 0.44
LRRC28-202ENST00000331450 GPC3P51654 580 aa17.81■□□□□ 0.44
LRRC28-202ENST00000331450 TMEM62Q0P6H9 643 aa17.81■□□□□ 0.44
LRRC28-202ENST00000331450 GPNMBQ14956 572 aa17.81■□□□□ 0.44
LRRC28-202ENST00000331450 MFSD5Q6N075 450 aa17.81■□□□□ 0.44
LRRC28-202ENST00000331450 ZNF710Q8N1W2 664 aa17.81■□□□□ 0.44
LRRC28-202ENST00000331450 ENGASEQ8NFI3 743 aa17.81■□□□□ 0.44
LRRC28-202ENST00000331450 PSPC1Q8WXF1 523 aaKnown RBP17.81■□□□□ 0.44
LRRC28-202ENST00000331450 GBP4Q96PP9 640 aa17.81■□□□□ 0.44
LRRC28-202ENST00000331450 TIPINQ9BVW5 301 aa17.81■□□□□ 0.44
LRRC28-202ENST00000331450 POLR3FQ9H1D9 316 aaPredicted RBP17.81■□□□□ 0.44
LRRC28-202ENST00000331450 TNMDQ9H2S6 317 aa17.81■□□□□ 0.44
LRRC28-202ENST00000331450 ADAMTS10Q9H324 1103 aa17.81■□□□□ 0.44
LRRC28-202ENST00000331450 MAGEF1Q9HAY2 307 aa17.81■□□□□ 0.44
LRRC28-202ENST00000331450 PRKAG2Q9UGJ0 569 aa17.81■□□□□ 0.44
LRRC28-202ENST00000331450 AKT3Q9Y243 479 aa17.81■□□□□ 0.44
LRRC28-202ENST00000331450 COL4A3BPQ9Y5P4 624 aa17.81■□□□□ 0.44
LRRC28-202ENST00000331450 TRPV2Q9Y5S1 764 aa17.81■□□□□ 0.44
LRRC28-202ENST00000331450 TET1Q8NFU7 2136 aa17.81■□□□□ 0.44
LRRC28-202ENST00000331450 GOLGA6L4A6NEF3 574 aa17.8■□□□□ 0.44
LRRC28-202ENST00000331450 RSPH10B2B2RC85 870 aa17.8■□□□□ 0.44
LRRC28-202ENST00000331450 RSPH10BP0C881 870 aa17.8■□□□□ 0.44
LRRC28-202ENST00000331450 SYKP43405 635 aa17.8■□□□□ 0.44
LRRC28-202ENST00000331450 CCL23P55773 120 aa17.8■□□□□ 0.44
LRRC28-202ENST00000331450 DHX8Q14562 1220 aaKnown RBP17.8■□□□□ 0.44
LRRC28-202ENST00000331450 SV2BQ7L1I2 683 aa17.8■□□□□ 0.44
LRRC28-202ENST00000331450 FMR1NBQ8N0W7 255 aaPredicted RBP17.8■□□□□ 0.44
LRRC28-202ENST00000331450 ASAP3Q8TDY4 903 aa17.8■□□□□ 0.44
LRRC28-202ENST00000331450 PRPF31Q8WWY3 499 aaKnown RBP17.8■□□□□ 0.44
LRRC28-202ENST00000331450 VWCEQ96DN2 955 aa17.8■□□□□ 0.44
LRRC28-202ENST00000331450 SCLYQ96I15 445 aa17.8■□□□□ 0.44
LRRC28-202ENST00000331450 REEP2Q9BRK0 252 aa17.8■□□□□ 0.44
LRRC28-202ENST00000331450 CELF4Q9BZC1 486 aaKnown RBP17.8■□□□□ 0.44
LRRC28-202ENST00000331450 CDHR5Q9HBB8 845 aa17.8■□□□□ 0.44
LRRC28-202ENST00000331450 USP25Q9UHP3 1055 aa17.8■□□□□ 0.44
LRRC28-202ENST00000331450 MICAL3Q7RTP6 2002 aa17.8■□□□□ 0.44
LRRC28-202ENST00000331450 HIP1RO75146 1068 aa17.79■□□□□ 0.44
LRRC28-202ENST00000331450 PARNO95453 639 aaKnown RBP17.79■□□□□ 0.44
LRRC28-202ENST00000331450 SLFN14P0C7P3 912 aa17.79■□□□□ 0.44
LRRC28-202ENST00000331450 GLRA2P23416 452 aa17.79■□□□□ 0.44
LRRC28-202ENST00000331450 NLRP11P59045 1033 aaKnown RBP17.79■□□□□ 0.44
LRRC28-202ENST00000331450 UBE2HP62256 183 aa17.79■□□□□ 0.44
LRRC28-202ENST00000331450 LAMTOR4Q0VGL1 99 aa17.79■□□□□ 0.44
LRRC28-202ENST00000331450 SNW1Q13573 536 aaKnown RBP17.79■□□□□ 0.44
LRRC28-202ENST00000331450 CAPSQ13938 189 aa17.79■□□□□ 0.44
LRRC28-202ENST00000331450 MXD4Q14582 209 aaPredicted RBP17.79■□□□□ 0.44
LRRC28-202ENST00000331450 KIZQ2M2Z5 673 aa17.79■□□□□ 0.44
LRRC28-202ENST00000331450 LONRF3Q496Y0 759 aa17.79■□□□□ 0.44
LRRC28-202ENST00000331450 TPRNQ4KMQ1 711 aa17.79■□□□□ 0.44
LRRC28-202ENST00000331450 MAEAQ7L5Y9 396 aa17.79■□□□□ 0.44
LRRC28-202ENST00000331450 ZNF410Q86VK4 478 aa17.79■□□□□ 0.44
LRRC28-202ENST00000331450 RHPN2Q8IUC4 686 aa17.79■□□□□ 0.44
LRRC28-202ENST00000331450 KSR1Q8IVT5 923 aa17.79■□□□□ 0.44
LRRC28-202ENST00000331450 BSNDQ8WZ55 320 aa17.79■□□□□ 0.44
LRRC28-202ENST00000331450 KIFAP3Q92845 792 aa17.79■□□□□ 0.44
LRRC28-202ENST00000331450 OSBPL7Q9BZF2 842 aa17.79■□□□□ 0.44
LRRC28-202ENST00000331450 SERTAD1Q9UHV2 236 aa17.79■□□□□ 0.44
LRRC28-202ENST00000331450 ODF2LQ9ULJ1 636 aa17.79■□□□□ 0.44
LRRC28-202ENST00000331450 SQORQ9Y6N5 450 aa17.79■□□□□ 0.44
LRRC28-202ENST00000331450 PTPRSQ13332 1948 aa17.78■□□□□ 0.44
LRRC28-202ENST00000331450 NPHP3-ACAD11A0A0J9YXS1 232 aa17.78■□□□□ 0.44
LRRC28-202ENST00000331450 MYMKA6NI61 221 aa17.78■□□□□ 0.44
LRRC28-202ENST00000331450 M0QZ92 97 aa17.78■□□□□ 0.44
LRRC28-202ENST00000331450 ASAP2O43150 1006 aa17.78■□□□□ 0.44
LRRC28-202ENST00000331450 NBNO60934 754 aa17.78■□□□□ 0.44
LRRC28-202ENST00000331450 PRPF40AO75400 957 aaKnown RBP17.78■□□□□ 0.44
LRRC28-202ENST00000331450 CXCL10P02778 98 aa17.78■□□□□ 0.44
LRRC28-202ENST00000331450 RFC2P35250 354 aa17.78■□□□□ 0.44
LRRC28-202ENST00000331450 ZNF131P52739 623 aa17.78■□□□□ 0.44
LRRC28-202ENST00000331450 CRYBB1P53674 252 aaPredicted RBP17.78■□□□□ 0.44
LRRC28-202ENST00000331450 CDC42EP1Q00587 391 aa17.78■□□□□ 0.44
LRRC28-202ENST00000331450 FAM160A1Q05DH4 1040 aa17.78■□□□□ 0.44
LRRC28-202ENST00000331450 RAD51AP2Q09MP3 1159 aa17.78■□□□□ 0.44
LRRC28-202ENST00000331450 GIT2Q14161 759 aa17.78■□□□□ 0.44
LRRC28-202ENST00000331450 FBXO47Q5MNV8 452 aa17.78■□□□□ 0.44
LRRC28-202ENST00000331450 FAM102BQ5T8I3 360 aa17.78■□□□□ 0.44
LRRC28-202ENST00000331450 CNNM4Q6P4Q7 775 aa17.78■□□□□ 0.44
LRRC28-202ENST00000331450 IFNLR1Q8IU57 520 aaPredicted RBP17.78■□□□□ 0.44
LRRC28-202ENST00000331450 TMEM40Q8WWA1 233 aa17.78■□□□□ 0.44
LRRC28-202ENST00000331450 DDX12PQ92771 950 aa17.78■□□□□ 0.44
LRRC28-202ENST00000331450 STAMQ92783 540 aa17.78■□□□□ 0.44
LRRC28-202ENST00000331450 BADQ92934 168 aa17.78■□□□□ 0.44
LRRC28-202ENST00000331450 DNAJC19Q96DA6 116 aa17.78■□□□□ 0.44
LRRC28-202ENST00000331450 DRC1Q96MC2 740 aa17.78■□□□□ 0.44
LRRC28-202ENST00000331450 PPP1R16BQ96T49 567 aa17.78■□□□□ 0.44
LRRC28-202ENST00000331450 IFT122Q9HBG6 1241 aa17.78■□□□□ 0.44
LRRC28-202ENST00000331450 A0A087WZ62 844 aa17.77■□□□□ 0.44
LRRC28-202ENST00000331450 ZNF202O95125 648 aa17.77■□□□□ 0.44
LRRC28-202ENST00000331450 CSF2RAP15509 400 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms