RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 UGCGQ16739 394 aa10.5□□□□□ -0.73
C11orf54-201ENST00000331239 XKR9Q5GH70 373 aa10.5□□□□□ -0.73
C11orf54-201ENST00000331239 IER5Q5VY09 327 aa10.5□□□□□ -0.73
C11orf54-201ENST00000331239 LHX8Q68G74 356 aa10.5□□□□□ -0.73
C11orf54-201ENST00000331239 RETREG2Q8NC44 543 aa10.5□□□□□ -0.73
C11orf54-201ENST00000331239 SPIRE2Q8WWL2 714 aa10.5□□□□□ -0.73
C11orf54-201ENST00000331239 SLC7A3Q8WY07 619 aa10.5□□□□□ -0.73
C11orf54-201ENST00000331239 DDX12PQ92771 950 aa10.5□□□□□ -0.73
C11orf54-201ENST00000331239 HVCN1Q96D96 273 aa10.5□□□□□ -0.73
C11orf54-201ENST00000331239 CEP170P1Q96L14 293 aa10.5□□□□□ -0.73
C11orf54-201ENST00000331239 MTRQ99707 1265 aa10.5□□□□□ -0.73
C11orf54-201ENST00000331239 NTPCRQ9BSD7 190 aaKnown RBP10.5□□□□□ -0.73
C11orf54-201ENST00000331239 BCAS3Q9H6U6 928 aa10.5□□□□□ -0.73
C11orf54-201ENST00000331239 WRAP73Q9P2S5 460 aaPredicted RBP10.5□□□□□ -0.73
C11orf54-201ENST00000331239 IMPACTQ9P2X3 320 aa10.5□□□□□ -0.73
C11orf54-201ENST00000331239 OGDHLQ9ULD0 1010 aa10.5□□□□□ -0.73
C11orf54-201ENST00000331239 MYMKA6NI61 221 aa10.49□□□□□ -0.73
C11orf54-201ENST00000331239 ADCY6O43306 1168 aa10.49□□□□□ -0.73
C11orf54-201ENST00000331239 CNGA1P29973 690 aa10.49□□□□□ -0.73
C11orf54-201ENST00000331239 CCND3P30281 292 aaPredicted RBP10.49□□□□□ -0.73
C11orf54-201ENST00000331239 PSMC6P62333 389 aa10.49□□□□□ -0.73
C11orf54-201ENST00000331239 GIT2Q14161 759 aa10.49□□□□□ -0.73
C11orf54-201ENST00000331239 PCBP1Q15365 356 aaKnown RBP eCLIP10.49□□□□□ -0.73
C11orf54-201ENST00000331239 NFRKBQ6P4R8 1299 aa10.49□□□□□ -0.73
C11orf54-201ENST00000331239 CRISPLD2Q9H0B8 497 aa10.49□□□□□ -0.73
C11orf54-201ENST00000331239 PHF24Q9UPV7 400 aa10.49□□□□□ -0.73
C11orf54-201ENST00000331239 PAXBP1Q9Y5B6 917 aa10.49□□□□□ -0.73
C11orf54-201ENST00000331239 PCDHA5Q9Y5H7 936 aa10.49□□□□□ -0.73
C11orf54-201ENST00000331239 KLRC4O43908 158 aa10.49□□□□□ -0.73
C11orf54-201ENST00000331239 TBCAO75347 108 aaKnown RBP10.49□□□□□ -0.73
C11orf54-201ENST00000331239 MYCNP04198 464 aaPredicted RBP10.49□□□□□ -0.73
C11orf54-201ENST00000331239 KRT18P05783 430 aaKnown RBP10.49□□□□□ -0.73
C11orf54-201ENST00000331239 PSEN2P49810 448 aa10.49□□□□□ -0.73
C11orf54-201ENST00000331239 DNM2P50570 870 aa10.49□□□□□ -0.73
C11orf54-201ENST00000331239 MORC3Q14149 939 aa10.49□□□□□ -0.73
C11orf54-201ENST00000331239 MXD4Q14582 209 aaPredicted RBP10.49□□□□□ -0.73
C11orf54-201ENST00000331239 ARSHQ5FYA8 562 aa10.49□□□□□ -0.73
C11orf54-201ENST00000331239 GNASQ5JWF2 1037 aa10.49□□□□□ -0.73
C11orf54-201ENST00000331239 ZNF658Q5TYW1 1059 aaPredicted RBP10.49□□□□□ -0.73
C11orf54-201ENST00000331239 RPAINQ86UA6 219 aa10.49□□□□□ -0.73
C11orf54-201ENST00000331239 NME8Q8N427 588 aa10.49□□□□□ -0.73
C11orf54-201ENST00000331239 CCDC150Q8NCX0 1101 aa10.49□□□□□ -0.73
C11orf54-201ENST00000331239 LRRC15Q8TF66 581 aa10.49□□□□□ -0.73
C11orf54-201ENST00000331239 TMEM174Q8WUU8 243 aa10.49□□□□□ -0.73
C11orf54-201ENST00000331239 ZNF333Q96JL9 665 aa10.49□□□□□ -0.73
C11orf54-201ENST00000331239 CCDC94Q9BW85 323 aaPredicted RBP10.49□□□□□ -0.73
C11orf54-201ENST00000331239 XPO4Q9C0E2 1151 aaKnown RBP10.49□□□□□ -0.73
C11orf54-201ENST00000331239 PARVGQ9HBI0 331 aa10.49□□□□□ -0.73
C11orf54-201ENST00000331239 LARSQ9P2J5 1176 aaKnown RBP10.49□□□□□ -0.73
C11orf54-201ENST00000331239 CGNQ9P2M7 1197 aaKnown RBP10.49□□□□□ -0.73
C11orf54-201ENST00000331239 SEPT9Q9UHD8 586 aaPredicted RBP10.49□□□□□ -0.73
C11orf54-201ENST00000331239 MYH11P35749 1972 aa10.49□□□□□ -0.73
C11orf54-201ENST00000331239 MBLAC1A4D2B0 266 aaPredicted RBP10.48□□□□□ -0.73
C11orf54-201ENST00000331239 DNM1LO00429 736 aa10.48□□□□□ -0.73
C11orf54-201ENST00000331239 IKBKBO14920 756 aa10.48□□□□□ -0.73
C11orf54-201ENST00000331239 TMOD1P28289 359 aa10.48□□□□□ -0.73
C11orf54-201ENST00000331239 ASIC1P78348 528 aa10.48□□□□□ -0.73
C11orf54-201ENST00000331239 STIM1Q13586 685 aa10.48□□□□□ -0.73
C11orf54-201ENST00000331239 MFSD10Q14728 455 aa10.48□□□□□ -0.73
C11orf54-201ENST00000331239 NCAPHQ15003 741 aa10.48□□□□□ -0.73
C11orf54-201ENST00000331239 UTP14CQ5TAP6 766 aaKnown RBP10.48□□□□□ -0.73
C11orf54-201ENST00000331239 PIGOQ8TEQ8 1089 aa10.48□□□□□ -0.73
C11orf54-201ENST00000331239 KAT2BQ92831 832 aa10.48□□□□□ -0.73
C11orf54-201ENST00000331239 ARID3AQ99856 593 aa10.48□□□□□ -0.73
C11orf54-201ENST00000331239 NFKBIZQ9BYH8 718 aa10.48□□□□□ -0.73
C11orf54-201ENST00000331239 EXOC1Q9NV70 894 aa10.48□□□□□ -0.73
C11orf54-201ENST00000331239 RNF216Q9NWF9 866 aaPredicted RBP10.48□□□□□ -0.73
C11orf54-201ENST00000331239 IFNKQ9P0W0 207 aa10.48□□□□□ -0.73
C11orf54-201ENST00000331239 EIF3DO15371 548 aaKnown RBP eCLIP10.48□□□□□ -0.73
C11orf54-201ENST00000331239 CAND2O75155 1236 aa10.48□□□□□ -0.73
C11orf54-201ENST00000331239 GJB1P08034 283 aa10.48□□□□□ -0.73
C11orf54-201ENST00000331239 C6orf222P0C671 652 aaPredicted RBP10.48□□□□□ -0.73
C11orf54-201ENST00000331239 ERCC5P28715 1186 aaPredicted RBP10.48□□□□□ -0.73
C11orf54-201ENST00000331239 AFMP43652 599 aa10.48□□□□□ -0.73
C11orf54-201ENST00000331239 LBX1P52954 281 aa10.48□□□□□ -0.73
C11orf54-201ENST00000331239 TBC1D8BQ0IIM8 1120 aa10.48□□□□□ -0.73
C11orf54-201ENST00000331239 PNOCQ13519 176 aa10.48□□□□□ -0.73
C11orf54-201ENST00000331239 DHX8Q14562 1220 aaKnown RBP10.48□□□□□ -0.73
C11orf54-201ENST00000331239 LRRC41Q15345 812 aa10.48□□□□□ -0.73
C11orf54-201ENST00000331239 CEP135Q66GS9 1140 aa10.48□□□□□ -0.73
C11orf54-201ENST00000331239 CCDC112Q8NEF3 446 aa10.48□□□□□ -0.73
C11orf54-201ENST00000331239 ANKRD7Q92527 254 aa10.48□□□□□ -0.73
C11orf54-201ENST00000331239 PANK4Q9NVE7 773 aa10.48□□□□□ -0.73
C11orf54-201ENST00000331239 PCDHA2Q9Y5H9 948 aa10.48□□□□□ -0.73
C11orf54-201ENST00000331239 USP27XA6NNY8 438 aa10.47□□□□□ -0.73
C11orf54-201ENST00000331239 FAM13AO94988 1023 aa10.47□□□□□ -0.73
C11orf54-201ENST00000331239 PLS3P13797 630 aa10.47□□□□□ -0.73
C11orf54-201ENST00000331239 ARL2P36404 184 aa10.47□□□□□ -0.73
C11orf54-201ENST00000331239 SMTNP53814 917 aa10.47□□□□□ -0.73
C11orf54-201ENST00000331239 POLGP54098 1239 aaPredicted RBP10.47□□□□□ -0.73
C11orf54-201ENST00000331239 ADAM17P78536 824 aa10.47□□□□□ -0.73
C11orf54-201ENST00000331239 SP4Q02446 784 aa10.47□□□□□ -0.73
C11orf54-201ENST00000331239 TRIM32Q13049 653 aa10.47□□□□□ -0.73
C11orf54-201ENST00000331239 CUL4BQ13620 913 aa10.47□□□□□ -0.73
C11orf54-201ENST00000331239 BMT2Q1RMZ1 405 aa10.47□□□□□ -0.73
C11orf54-201ENST00000331239 TAF2Q6P1X5 1199 aa10.47□□□□□ -0.73
C11orf54-201ENST00000331239 NYAP1Q6ZVC0 841 aa10.47□□□□□ -0.73
C11orf54-201ENST00000331239 IFNLR1Q8IU57 520 aaPredicted RBP10.47□□□□□ -0.73
C11orf54-201ENST00000331239 LINC01465Q8N7H1 131 aa10.47□□□□□ -0.73
C11orf54-201ENST00000331239 SLC43A3Q8NBI5 491 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms