RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 KCNV2Q8TDN2 545 aa11.29□□□□□ -0.6
CLN8-201ENST00000331222 DBNLQ9UJU6 430 aaKnown RBP11.29□□□□□ -0.6
CLN8-201ENST00000331222 A6NNZ2 444 aa11.28□□□□□ -0.6
CLN8-201ENST00000331222 SUPT3HB4E1H0 165 aa11.28□□□□□ -0.6
CLN8-201ENST00000331222 ANKRD65E5RJM6 399 aa11.28□□□□□ -0.6
CLN8-201ENST00000331222 SEC24DO94855 1032 aaPredicted RBP11.28□□□□□ -0.6
CLN8-201ENST00000331222 GYS2P54840 703 aa11.28□□□□□ -0.6
CLN8-201ENST00000331222 CSE1LP55060 971 aaKnown RBP11.28□□□□□ -0.6
CLN8-201ENST00000331222 NLRP11P59045 1033 aaKnown RBP11.28□□□□□ -0.6
CLN8-201ENST00000331222 TUBB8Q3ZCM7 444 aa11.28□□□□□ -0.6
CLN8-201ENST00000331222 AARS2Q5JTZ9 985 aaKnown RBP11.28□□□□□ -0.6
CLN8-201ENST00000331222 IL31Q6EBC2 164 aa11.28□□□□□ -0.6
CLN8-201ENST00000331222 ENOX1Q8TC92 643 aaKnown RBP11.28□□□□□ -0.6
CLN8-201ENST00000331222 RNF25Q96BH1 459 aaPredicted RBP11.28□□□□□ -0.6
CLN8-201ENST00000331222 CYP4F11Q9HBI6 524 aa11.28□□□□□ -0.6
CLN8-201ENST00000331222 DCTN4Q9UJW0 460 aa11.28□□□□□ -0.6
CLN8-201ENST00000331222 USP17L15C9J2P7 530 aa11.28□□□□□ -0.6
CLN8-201ENST00000331222 USP17L13C9JLJ4 530 aa11.28□□□□□ -0.6
CLN8-201ENST00000331222 USP17L11C9JVI0 530 aa11.28□□□□□ -0.6
CLN8-201ENST00000331222 USP17L18D6R9N7 530 aa11.28□□□□□ -0.6
CLN8-201ENST00000331222 USP17L22D6RA61 530 aa11.28□□□□□ -0.6
CLN8-201ENST00000331222 USP17L17D6RBQ6 530 aa11.28□□□□□ -0.6
CLN8-201ENST00000331222 USP17L19D6RCP7 530 aa11.28□□□□□ -0.6
CLN8-201ENST00000331222 USP17L20D6RJB6 530 aa11.28□□□□□ -0.6
CLN8-201ENST00000331222 TTI1O43156 1089 aa11.28□□□□□ -0.6
CLN8-201ENST00000331222 PJA2O43164 708 aa11.28□□□□□ -0.6
CLN8-201ENST00000331222 ADD2P35612 726 aa11.28□□□□□ -0.6
CLN8-201ENST00000331222 USP17L24Q0WX57 530 aa11.28□□□□□ -0.6
CLN8-201ENST00000331222 ZNF667Q5HYK9 610 aa11.28□□□□□ -0.6
CLN8-201ENST00000331222 USP17L6PQ6QN14 398 aa11.28□□□□□ -0.6
CLN8-201ENST00000331222 ARL8AQ96BM9 186 aa11.28□□□□□ -0.6
CLN8-201ENST00000331222 FMO2Q99518 471 aa11.28□□□□□ -0.6
CLN8-201ENST00000331222 WARS2Q9UGM6 360 aaKnown RBP11.28□□□□□ -0.6
CLN8-201ENST00000331222 ECE2O60344 883 aa11.28□□□□□ -0.6
CLN8-201ENST00000331222 PDHA1P08559 390 aa11.28□□□□□ -0.6
CLN8-201ENST00000331222 ZNF211Q13398 564 aaPredicted RBP11.28□□□□□ -0.6
CLN8-201ENST00000331222 PRAMEF18Q5VWM3 479 aa11.28□□□□□ -0.6
CLN8-201ENST00000331222 SEPT12Q8IYM1 358 aa11.28□□□□□ -0.6
CLN8-201ENST00000331222 TRIM11Q96F44 468 aa11.28□□□□□ -0.6
CLN8-201ENST00000331222 DRC3Q9H069 523 aa11.28□□□□□ -0.6
CLN8-201ENST00000331222 ZMYND12Q9H0C1 365 aa11.28□□□□□ -0.6
CLN8-201ENST00000331222 ING2Q9H160 280 aa11.28□□□□□ -0.6
CLN8-201ENST00000331222 PIM2Q9P1W9 311 aa11.28□□□□□ -0.6
CLN8-201ENST00000331222 PPARGC1AQ9UBK2 798 aaKnown RBP11.28□□□□□ -0.6
CLN8-201ENST00000331222 UBE4BO95155 1302 aa11.28□□□□□ -0.6
CLN8-201ENST00000331222 POTEMA6NI47 508 aa11.28□□□□□ -0.6
CLN8-201ENST00000331222 TJAP1Q5JTD0 557 aa11.28□□□□□ -0.6
CLN8-201ENST00000331222 RC3H1Q5TC82 1133 aaKnown RBP11.28□□□□□ -0.6
CLN8-201ENST00000331222 C1orf131Q8NDD1 294 aaKnown RBP11.28□□□□□ -0.6
CLN8-201ENST00000331222 CEP70Q8NHQ1 597 aa11.28□□□□□ -0.6
CLN8-201ENST00000331222 DHX38Q92620 1227 aaKnown RBP11.28□□□□□ -0.6
CLN8-201ENST00000331222 CCDC17Q96LX7 622 aa11.28□□□□□ -0.6
CLN8-201ENST00000331222 GSDMAQ96QA5 445 aa11.28□□□□□ -0.6
CLN8-201ENST00000331222 STK17AQ9UEE5 414 aa11.28□□□□□ -0.6
CLN8-201ENST00000331222 CAPN15O75808 1086 aa11.28□□□□□ -0.6
CLN8-201ENST00000331222 LMBRD2Q68DH5 695 aaPredicted RBP11.28□□□□□ -0.6
CLN8-201ENST00000331222 LRRC31Q6UY01 552 aa11.28□□□□□ -0.6
CLN8-201ENST00000331222 MAGEB10Q96LZ2 347 aaPredicted RBP11.28□□□□□ -0.6
CLN8-201ENST00000331222 ALG13Q9NP73 1137 aaKnown RBP11.28□□□□□ -0.6
CLN8-201ENST00000331222 PGRMC1O00264 195 aaKnown RBP11.28□□□□□ -0.6
CLN8-201ENST00000331222 SERPING1P05155 500 aa11.28□□□□□ -0.6
CLN8-201ENST00000331222 MCF2P10911 925 aa11.28□□□□□ -0.6
CLN8-201ENST00000331222 RBM6P78332 1123 aaKnown RBP11.28□□□□□ -0.6
CLN8-201ENST00000331222 MAN2A1Q16706 1144 aa11.28□□□□□ -0.6
CLN8-201ENST00000331222 SYNE4Q8N205 404 aa11.28□□□□□ -0.6
CLN8-201ENST00000331222 TJP3O95049 919 aa11.27□□□□□ -0.6
CLN8-201ENST00000331222 CC2D1AQ6P1N0 951 aaPredicted RBP11.27□□□□□ -0.6
CLN8-201ENST00000331222 SLC44A5Q8NCS7 719 aa11.27□□□□□ -0.6
CLN8-201ENST00000331222 GIPC2Q8TF65 315 aa11.27□□□□□ -0.6
CLN8-201ENST00000331222 KIF12Q96FN5 646 aa11.27□□□□□ -0.6
CLN8-201ENST00000331222 PARD3Q8TEW0 1356 aa11.27□□□□□ -0.6
CLN8-201ENST00000331222 ZMYM4Q5VZL5 1548 aa11.27□□□□□ -0.6
CLN8-201ENST00000331222 CA4P22748 312 aa11.27□□□□□ -0.61
CLN8-201ENST00000331222 PCSK7Q16549 785 aa11.27□□□□□ -0.61
CLN8-201ENST00000331222 CENPUQ71F23 418 aa11.27□□□□□ -0.61
CLN8-201ENST00000331222 C6orf203Q9P0P8 240 aaPredicted RBP11.27□□□□□ -0.61
CLN8-201ENST00000331222 SUN2Q9UH99 717 aa11.27□□□□□ -0.61
CLN8-201ENST00000331222 NFU1Q9UMS0 254 aa11.27□□□□□ -0.61
CLN8-201ENST00000331222 PACSIN2Q9UNF0 486 aaPredicted RBP11.27□□□□□ -0.61
CLN8-201ENST00000331222 EN1Q05925 392 aaPredicted RBP11.27□□□□□ -0.61
CLN8-201ENST00000331222 TAF11Q15544 211 aa11.27□□□□□ -0.61
CLN8-201ENST00000331222 MAPK6Q16659 721 aa11.27□□□□□ -0.61
CLN8-201ENST00000331222 APOA5Q6Q788 366 aa11.27□□□□□ -0.61
CLN8-201ENST00000331222 RNF168Q8IYW5 571 aaPredicted RBP11.27□□□□□ -0.61
CLN8-201ENST00000331222 NRBF2Q96F24 287 aa11.27□□□□□ -0.61
CLN8-201ENST00000331222 CDHR1Q96JP9 859 aa11.27□□□□□ -0.61
CLN8-201ENST00000331222 ELAC2Q9BQ52 826 aaKnown RBP11.27□□□□□ -0.61
CLN8-201ENST00000331222 TRIM49BA6NDI0 452 aa11.27□□□□□ -0.61
CLN8-201ENST00000331222 KPNA2P52292 529 aaKnown RBP11.27□□□□□ -0.61
CLN8-201ENST00000331222 GFPT1Q06210 699 aaPredicted RBP11.27□□□□□ -0.61
CLN8-201ENST00000331222 ARHGAP18Q8N392 663 aa11.27□□□□□ -0.61
CLN8-201ENST00000331222 ZNF302Q9NR11 478 aa11.27□□□□□ -0.61
CLN8-201ENST00000331222 TRAF3IP3Q9Y228 551 aa11.27□□□□□ -0.61
CLN8-201ENST00000331222 GCC2Q8IWJ2 1684 aa11.27□□□□□ -0.61
CLN8-201ENST00000331222 hCG_2014768A0A024R1R8 64 aa11.27□□□□□ -0.61
CLN8-201ENST00000331222 PNMA6FA0A0J9YX94 578 aa11.27□□□□□ -0.61
CLN8-201ENST00000331222 PALMO75781 387 aa11.27□□□□□ -0.61
CLN8-201ENST00000331222 OR6J1Q8NGC5 347 aa11.27□□□□□ -0.61
CLN8-201ENST00000331222 RUNDC3BQ96NL0 473 aa11.27□□□□□ -0.61
CLN8-201ENST00000331222 SMAP1Q8IYB5 467 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms