RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 FBXO33Q7Z6M2 555 aa8.54□□□□□ -1.04
VMA21-201ENST00000330374 NEK9Q8TD19 979 aa8.54□□□□□ -1.04
VMA21-201ENST00000330374 SYN2Q92777 582 aaPredicted RBP8.54□□□□□ -1.04
VMA21-201ENST00000330374 C18orf8Q96DM3 657 aa8.54□□□□□ -1.04
VMA21-201ENST00000330374 FAM114A2Q9NRY5 505 aa8.54□□□□□ -1.04
VMA21-201ENST00000330374 CACNA1SQ13698 1873 aa8.54□□□□□ -1.04
VMA21-201ENST00000330374 PPIP5K2O43314 1243 aa8.54□□□□□ -1.04
VMA21-201ENST00000330374 MGRN1O60291 552 aa8.54□□□□□ -1.04
VMA21-201ENST00000330374 PON1P27169 355 aa8.54□□□□□ -1.04
VMA21-201ENST00000330374 CYP4A11Q02928 519 aa8.54□□□□□ -1.04
VMA21-201ENST00000330374 ITPK1Q13572 414 aa8.54□□□□□ -1.04
VMA21-201ENST00000330374 WDR78Q5VTH9 848 aa8.54□□□□□ -1.04
VMA21-201ENST00000330374 TRPM8Q7Z2W7 1104 aa8.54□□□□□ -1.04
VMA21-201ENST00000330374 SLC35G2Q8TBE7 412 aa8.54□□□□□ -1.04
VMA21-201ENST00000330374 FAXDC2Q96IV6 333 aa8.54□□□□□ -1.04
VMA21-201ENST00000330374 FGFR1OP2Q9NVK5 253 aa8.54□□□□□ -1.04
VMA21-201ENST00000330374 ZNF142P52746 1687 aaPredicted RBP8.54□□□□□ -1.04
VMA21-201ENST00000330374 PLCH1Q4KWH8 1693 aa8.54□□□□□ -1.04
VMA21-201ENST00000330374 CCDC188H7C350 402 aa8.54□□□□□ -1.04
VMA21-201ENST00000330374 DDX3XO00571 662 aaKnown RBP eCLIP8.54□□□□□ -1.042e-31■■■■■ 40.1
VMA21-201ENST00000330374 LRRN2O75325 713 aa8.54□□□□□ -1.04
VMA21-201ENST00000330374 AFPP02771 609 aaKnown RBP8.54□□□□□ -1.04
VMA21-201ENST00000330374 PSMD2Q13200 908 aa8.54□□□□□ -1.04
VMA21-201ENST00000330374 TRIM68Q6AZZ1 485 aa8.54□□□□□ -1.04
VMA21-201ENST00000330374 NT5DC3Q86UY8 548 aa8.54□□□□□ -1.04
VMA21-201ENST00000330374 LMBR1Q8WVP7 490 aa8.54□□□□□ -1.04
VMA21-201ENST00000330374 ATP6V0A4Q9HBG4 840 aa8.54□□□□□ -1.04
VMA21-201ENST00000330374 IGSF9BQ9UPX0 1349 aa8.53□□□□□ -1.04
VMA21-201ENST00000330374 ENO4A6NNW6 628 aa8.53□□□□□ -1.04
VMA21-201ENST00000330374 USP17L15C9J2P7 530 aa8.53□□□□□ -1.04
VMA21-201ENST00000330374 USP17L13C9JLJ4 530 aa8.53□□□□□ -1.04
VMA21-201ENST00000330374 USP17L11C9JVI0 530 aa8.53□□□□□ -1.04
VMA21-201ENST00000330374 USP17L18D6R9N7 530 aa8.53□□□□□ -1.04
VMA21-201ENST00000330374 USP17L22D6RA61 530 aa8.53□□□□□ -1.04
VMA21-201ENST00000330374 USP17L17D6RBQ6 530 aa8.53□□□□□ -1.04
VMA21-201ENST00000330374 USP17L19D6RCP7 530 aa8.53□□□□□ -1.04
VMA21-201ENST00000330374 USP17L20D6RJB6 530 aa8.53□□□□□ -1.04
VMA21-201ENST00000330374 ABCB11O95342 1321 aa8.53□□□□□ -1.04
VMA21-201ENST00000330374 MAPK8P45983 427 aa8.53□□□□□ -1.04
VMA21-201ENST00000330374 USP17L24Q0WX57 530 aa8.53□□□□□ -1.04
VMA21-201ENST00000330374 TTBK2Q6IQ55 1244 aa8.53□□□□□ -1.04
VMA21-201ENST00000330374 USP17L6PQ6QN14 398 aa8.53□□□□□ -1.04
VMA21-201ENST00000330374 DEPDC4Q8N2C3 294 aa8.53□□□□□ -1.04
VMA21-201ENST00000330374 ECT2Q9H8V3 914 aa8.53□□□□□ -1.04
VMA21-201ENST00000330374 C5orf60A6NFR6 353 aa8.53□□□□□ -1.04
VMA21-201ENST00000330374 RSPH10B2B2RC85 870 aa8.53□□□□□ -1.04
VMA21-201ENST00000330374 IGF2BP3O00425 579 aaKnown RBP eCLIP8.53□□□□□ -1.04
VMA21-201ENST00000330374 DNAJC8O75937 253 aaPredicted RBP8.53□□□□□ -1.04
VMA21-201ENST00000330374 ACSL3O95573 720 aa8.53□□□□□ -1.04
VMA21-201ENST00000330374 RSPH10BP0C881 870 aa8.53□□□□□ -1.04
VMA21-201ENST00000330374 CREB1P16220 341 aa8.53□□□□□ -1.04
VMA21-201ENST00000330374 FXR2P51116 673 aaKnown RBP eCLIP8.53□□□□□ -1.04
VMA21-201ENST00000330374 CCNHP51946 323 aaPredicted RBP8.53□□□□□ -1.04
VMA21-201ENST00000330374 PSMC6P62333 389 aa8.53□□□□□ -1.04
VMA21-201ENST00000330374 SLC30A10Q6XR72 485 aa8.53□□□□□ -1.04
VMA21-201ENST00000330374 SFR1Q86XK3 245 aa8.53□□□□□ -1.04
VMA21-201ENST00000330374 C1orf131Q8NDD1 294 aaKnown RBP8.53□□□□□ -1.04
VMA21-201ENST00000330374 ATP8B4Q8TF62 1192 aa8.53□□□□□ -1.04
VMA21-201ENST00000330374 PLCD4Q9BRC7 762 aa8.53□□□□□ -1.04
VMA21-201ENST00000330374 SPZ1Q9BXG8 430 aa8.53□□□□□ -1.04
VMA21-201ENST00000330374 CNOT10Q9H9A5 744 aaKnown RBP8.53□□□□□ -1.04
VMA21-201ENST00000330374 VTI1BQ9UEU0 232 aa8.53□□□□□ -1.04
VMA21-201ENST00000330374 PNMA3Q9UL41 463 aa8.53□□□□□ -1.04
VMA21-201ENST00000330374 GOLGA6L10A0A0M3HER8 536 aa8.53□□□□□ -1.04
VMA21-201ENST00000330374 TCP11X1B4DZS4 312 aa8.53□□□□□ -1.04
VMA21-201ENST00000330374 EDIL3O43854 480 aa8.53□□□□□ -1.04
VMA21-201ENST00000330374 AKAP3O75969 853 aa8.53□□□□□ -1.04
VMA21-201ENST00000330374 SKIP12755 728 aa8.53□□□□□ -1.04
VMA21-201ENST00000330374 KCNJ1P48048 391 aa8.53□□□□□ -1.04
VMA21-201ENST00000330374 ALDH5A1P51649 535 aaPredicted RBP8.53□□□□□ -1.04
VMA21-201ENST00000330374 C1QBPQ07021 282 aaKnown RBP8.53□□□□□ -1.04
VMA21-201ENST00000330374 AMHR2Q16671 573 aa8.53□□□□□ -1.04
VMA21-201ENST00000330374 LONRF1Q17RB8 773 aa8.53□□□□□ -1.04
VMA21-201ENST00000330374 LACTB2Q53H82 288 aaPredicted RBP8.53□□□□□ -1.04
VMA21-201ENST00000330374 COBLL1Q53SF7 1204 aa8.53□□□□□ -1.04
VMA21-201ENST00000330374 PLPP6Q8IY26 295 aa8.53□□□□□ -1.04
VMA21-201ENST00000330374 HAS1Q92839 578 aa8.53□□□□□ -1.04
VMA21-201ENST00000330374 KLHL29Q96CT2 875 aa8.53□□□□□ -1.04
VMA21-201ENST00000330374 CEP63Q96MT8 703 aa8.53□□□□□ -1.04
VMA21-201ENST00000330374 PAIP2Q9BPZ3 127 aaKnown RBP8.53□□□□□ -1.04
VMA21-201ENST00000330374 LRRC27Q9C0I9 530 aa8.53□□□□□ -1.04
VMA21-201ENST00000330374 RAB17Q9H0T7 212 aa8.53□□□□□ -1.04
VMA21-201ENST00000330374 SLITRK6Q9H5Y7 841 aa8.53□□□□□ -1.04
VMA21-201ENST00000330374 TAS2R14Q9NYV8 317 aa8.53□□□□□ -1.04
VMA21-201ENST00000330374 LOC102724428A0A0B4J2F2 783 aa8.52□□□□□ -1.04
VMA21-201ENST00000330374 CCDC189A1A4V9 331 aa8.52□□□□□ -1.04
VMA21-201ENST00000330374 SLURP2P0DP57 97 aa8.52□□□□□ -1.04
VMA21-201ENST00000330374 RFC4P35249 363 aa8.52□□□□□ -1.04
VMA21-201ENST00000330374 MRPL12P52815 198 aaKnown RBP8.52□□□□□ -1.04
VMA21-201ENST00000330374 SIK1P57059 783 aa8.52□□□□□ -1.04
VMA21-201ENST00000330374 CRYMQ14894 314 aa8.52□□□□□ -1.04
VMA21-201ENST00000330374 TNIP1Q15025 636 aa8.52□□□□□ -1.04
VMA21-201ENST00000330374 DCAF12L1Q5VU92 463 aa8.52□□□□□ -1.04
VMA21-201ENST00000330374 NUGGCQ68CJ6 796 aa8.52□□□□□ -1.04
VMA21-201ENST00000330374 ARMC9Q7Z3E5 817 aa8.52□□□□□ -1.04
VMA21-201ENST00000330374 JAMLQ86YT9 394 aa8.52□□□□□ -1.04
VMA21-201ENST00000330374 CTNNBL1Q8WYA6 563 aaPredicted RBP8.52□□□□□ -1.04
VMA21-201ENST00000330374 ARHGEF26Q96DR7 871 aa8.52□□□□□ -1.04
VMA21-201ENST00000330374 ZNF317Q96PQ6 595 aaPredicted RBP8.52□□□□□ -1.04
VMA21-201ENST00000330374 LBHD1Q9BQE6 289 aaPredicted RBP8.52□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms