RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 NT5C1B-RDH14C9J2C7 533 aa17■□□□□ 0.31
CTHRC1-201ENST00000330295 GPR182O15218 404 aa17■□□□□ 0.31
CTHRC1-201ENST00000330295 PPP1R11O60927 126 aaPredicted RBP17■□□□□ 0.31
CTHRC1-201ENST00000330295 C1QTNF9P0C862 333 aa17■□□□□ 0.31
CTHRC1-201ENST00000330295 CTSAP10619 480 aa17■□□□□ 0.31
CTHRC1-201ENST00000330295 METAP2P50579 478 aaKnown RBP eCLIP17■□□□□ 0.31
CTHRC1-201ENST00000330295 LAIR1Q6GTX8 287 aa17■□□□□ 0.31
CTHRC1-201ENST00000330295 LRSAM1Q6UWE0 723 aa17■□□□□ 0.31
CTHRC1-201ENST00000330295 UNQ6494/PRO21346Q6UXR6 183 aa17■□□□□ 0.31
CTHRC1-201ENST00000330295 PRR23CQ6ZRP0 262 aa17■□□□□ 0.31
CTHRC1-201ENST00000330295 TRAPPC12Q8WVT3 735 aa17■□□□□ 0.31
CTHRC1-201ENST00000330295 SEPT1Q8WYJ6 367 aa17■□□□□ 0.31
CTHRC1-201ENST00000330295 GPATCH3Q96I76 525 aa17■□□□□ 0.31
CTHRC1-201ENST00000330295 MYADMQ96S97 322 aa17■□□□□ 0.31
CTHRC1-201ENST00000330295 WDR6Q9NNW5 1121 aaKnown RBP17■□□□□ 0.31
CTHRC1-201ENST00000330295 GDF9O60383 454 aa16.99■□□□□ 0.31
CTHRC1-201ENST00000330295 MAGEA9P43362 315 aa16.99■□□□□ 0.31
CTHRC1-201ENST00000330295 ALDH7A1P49419 539 aaKnown RBP16.99■□□□□ 0.31
CTHRC1-201ENST00000330295 ALX1Q15699 326 aa16.99■□□□□ 0.31
CTHRC1-201ENST00000330295 LPAL2Q16609 132 aa16.99■□□□□ 0.31
CTHRC1-201ENST00000330295 TSSK4Q6SA08 328 aa16.99■□□□□ 0.31
CTHRC1-201ENST00000330295 DGKHQ86XP1 1220 aa16.99■□□□□ 0.31
CTHRC1-201ENST00000330295 KDF1Q8NAX2 398 aaPredicted RBP16.99■□□□□ 0.31
CTHRC1-201ENST00000330295 DDX23Q9BUQ8 820 aaKnown RBP16.99■□□□□ 0.31
CTHRC1-201ENST00000330295 DCTPP1Q9H773 170 aa16.99■□□□□ 0.31
CTHRC1-201ENST00000330295 CDHR5Q9HBB8 845 aa16.99■□□□□ 0.31
CTHRC1-201ENST00000330295 SEMA4GQ9NTN9 838 aa16.99■□□□□ 0.31
CTHRC1-201ENST00000330295 CLUHO75153 1309 aa16.98■□□□□ 0.31
CTHRC1-201ENST00000330295 COL4A3Q01955 1670 aa16.98■□□□□ 0.31
CTHRC1-201ENST00000330295 RALGAPA1Q6GYQ0 2036 aa16.98■□□□□ 0.31
CTHRC1-201ENST00000330295 TRIM6-TRIM34B2RNG4 842 aa16.98■□□□□ 0.31
CTHRC1-201ENST00000330295 RETP07949 1114 aa16.98■□□□□ 0.31
CTHRC1-201ENST00000330295 PARP1P09874 1014 aaKnown RBP16.98■□□□□ 0.31
CTHRC1-201ENST00000330295 CLCN4P51793 760 aa16.98■□□□□ 0.31
CTHRC1-201ENST00000330295 POLGP54098 1239 aaPredicted RBP16.98■□□□□ 0.31
CTHRC1-201ENST00000330295 BCAR1P56945 870 aa16.98■□□□□ 0.31
CTHRC1-201ENST00000330295 DSC3Q14574 896 aa16.98■□□□□ 0.31
CTHRC1-201ENST00000330295 UBXN2BQ14CS0 331 aa16.98■□□□□ 0.31
CTHRC1-201ENST00000330295 IL31Q6EBC2 164 aa16.98■□□□□ 0.31
CTHRC1-201ENST00000330295 CMASQ8NFW8 434 aaPredicted RBP16.98■□□□□ 0.31
CTHRC1-201ENST00000330295 ZKSCAN3Q9BRR0 538 aa16.98■□□□□ 0.31
CTHRC1-201ENST00000330295 FAM126AQ9BYI3 521 aaPredicted RBP16.98■□□□□ 0.31
CTHRC1-201ENST00000330295 OSBPL6Q9BZF3 934 aa16.98■□□□□ 0.31
CTHRC1-201ENST00000330295 MTF2Q9Y483 593 aaPredicted RBP16.98■□□□□ 0.31
CTHRC1-201ENST00000330295 SNW1Q13573 536 aaKnown RBP16.97■□□□□ 0.31
CTHRC1-201ENST00000330295 HTR4Q13639 388 aa16.97■□□□□ 0.31
CTHRC1-201ENST00000330295 WTAPQ15007 396 aa16.97■□□□□ 0.31
CTHRC1-201ENST00000330295 PLCB4Q15147 1175 aa16.97■□□□□ 0.31
CTHRC1-201ENST00000330295 CSRP2Q16527 193 aa16.97■□□□□ 0.31
CTHRC1-201ENST00000330295 CLLU1OSQ5K130 101 aa16.97■□□□□ 0.31
CTHRC1-201ENST00000330295 TMEM173Q86WV6 379 aaPredicted RBP16.97■□□□□ 0.31
CTHRC1-201ENST00000330295 BBXQ8WY36 941 aaPredicted RBP16.97■□□□□ 0.31
CTHRC1-201ENST00000330295 KAT14Q9H8E8 782 aa16.97■□□□□ 0.31
CTHRC1-201ENST00000330295 FAM170BA6NMN3 283 aa16.96■□□□□ 0.31
CTHRC1-201ENST00000330295 ANHXE9PGG2 379 aa16.96■□□□□ 0.31
CTHRC1-201ENST00000330295 ZBTB5O15062 677 aa16.96■□□□□ 0.31
CTHRC1-201ENST00000330295 DDX53Q86TM3 631 aaKnown RBP16.96■□□□□ 0.31
CTHRC1-201ENST00000330295 NLRX1Q86UT6 975 aa16.96■□□□□ 0.31
CTHRC1-201ENST00000330295 FAM228AQ86W67 206 aa16.96■□□□□ 0.31
CTHRC1-201ENST00000330295 TNPO1Q92973 898 aaKnown RBP16.96■□□□□ 0.31
CTHRC1-201ENST00000330295 MTMR8Q96EF0 704 aa16.96■□□□□ 0.31
CTHRC1-201ENST00000330295 PRMT8Q9NR22 394 aaPredicted RBP16.96■□□□□ 0.31
CTHRC1-201ENST00000330295 LHX6Q9UPM6 363 aa16.96■□□□□ 0.31
CTHRC1-201ENST00000330295 NUMBLQ9Y6R0 609 aa16.96■□□□□ 0.31
CTHRC1-201ENST00000330295 ASH1LQ9NR48 2969 aaKnown RBP16.95■□□□□ 0.3
CTHRC1-201ENST00000330295 ATP9AO75110 1047 aa16.95■□□□□ 0.3
CTHRC1-201ENST00000330295 FGAP02671 866 aa16.95■□□□□ 0.3
CTHRC1-201ENST00000330295 LAMP2P13473 410 aa16.95■□□□□ 0.3
CTHRC1-201ENST00000330295 KCNA2P16389 499 aa16.95■□□□□ 0.3
CTHRC1-201ENST00000330295 KLRC2P26717 231 aa16.95■□□□□ 0.3
CTHRC1-201ENST00000330295 RING1Q06587 406 aa16.95■□□□□ 0.3
CTHRC1-201ENST00000330295 MLF2Q15773 248 aaPredicted RBP16.95■□□□□ 0.3
CTHRC1-201ENST00000330295 MTHFD1LQ6UB35 978 aa16.95■□□□□ 0.3
CTHRC1-201ENST00000330295 CYP26C1Q6V0L0 522 aa16.95■□□□□ 0.3
CTHRC1-201ENST00000330295 MFSD6Q6ZSS7 791 aa16.95■□□□□ 0.3
CTHRC1-201ENST00000330295 KLHL5Q96PQ7 755 aa16.95■□□□□ 0.3
CTHRC1-201ENST00000330295 PCYT2Q99447 389 aa16.95■□□□□ 0.3
CTHRC1-201ENST00000330295 RHOBTB2Q9BYZ6 727 aa16.95■□□□□ 0.3
CTHRC1-201ENST00000330295 PCDHB15Q9Y5E8 787 aa16.95■□□□□ 0.3
CTHRC1-201ENST00000330295 MYH15Q9Y2K3 1946 aa16.95■□□□□ 0.3
CTHRC1-201ENST00000330295 FOXD2O60548 495 aaPredicted RBP16.94■□□□□ 0.3
CTHRC1-201ENST00000330295 PCP11498 1178 aaKnown RBP16.94■□□□□ 0.3
CTHRC1-201ENST00000330295 HAND2P61296 217 aa16.94■□□□□ 0.3
CTHRC1-201ENST00000330295 GPC5P78333 572 aa16.94■□□□□ 0.3
CTHRC1-201ENST00000330295 PRKCQQ04759 706 aa16.94■□□□□ 0.3
CTHRC1-201ENST00000330295 PCNX4Q63HM2 1172 aa16.94■□□□□ 0.3
CTHRC1-201ENST00000330295 ECHDC2Q86YB7 292 aa16.94■□□□□ 0.3
CTHRC1-201ENST00000330295 CELF5Q8N6W0 485 aaKnown RBP16.94■□□□□ 0.3
CTHRC1-201ENST00000330295 RNF169Q8NCN4 708 aa16.94■□□□□ 0.3
CTHRC1-201ENST00000330295 MYL10Q9BUA6 226 aa16.94■□□□□ 0.3
CTHRC1-201ENST00000330295 EMILIN2Q9BXX0 1053 aa16.94■□□□□ 0.3
CTHRC1-201ENST00000330295 MRPL9Q9BYD2 267 aaKnown RBP16.94■□□□□ 0.3
CTHRC1-201ENST00000330295 LTB4R2Q9NPC1 389 aa16.94■□□□□ 0.3
CTHRC1-201ENST00000330295 MAN1C1Q9NR34 630 aa16.94■□□□□ 0.3
CTHRC1-201ENST00000330295 MAST4O15021 2626 aa16.94■□□□□ 0.3
CTHRC1-201ENST00000330295 CCDC195A0A1B0GUA6 201 aa16.93■□□□□ 0.3
CTHRC1-201ENST00000330295 SRRM3A6NNA2 597 aaPredicted RBP16.93■□□□□ 0.3
CTHRC1-201ENST00000330295 ZIC2O95409 532 aaPredicted RBP16.93■□□□□ 0.3
CTHRC1-201ENST00000330295 ZBTB41Q5SVQ8 909 aa16.93■□□□□ 0.3
CTHRC1-201ENST00000330295 PRR23BQ6ZRT6 265 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms