RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 TNFRSF8P28908 595 aa15.88■□□□□ 0.13
TPM3-206ENST00000330188 MRPS9P82933 396 aaKnown RBP15.88■□□□□ 0.13
TPM3-206ENST00000330188 VPS36Q86VN1 386 aa15.88■□□□□ 0.13
TPM3-206ENST00000330188 CPXCR1Q8N123 301 aa15.88■□□□□ 0.13
TPM3-206ENST00000330188 LRRC57Q8N9N7 239 aa15.88■□□□□ 0.13
TPM3-206ENST00000330188 GOLGA5Q8TBA6 731 aa15.88■□□□□ 0.13
TPM3-206ENST00000330188 LPAR1Q92633 364 aa15.88■□□□□ 0.13
TPM3-206ENST00000330188 TEPSINQ96N21 525 aa15.88■□□□□ 0.13
TPM3-206ENST00000330188 ZHX2Q9Y6X8 837 aa15.88■□□□□ 0.13
TPM3-206ENST00000330188 F8VZ95 297 aa15.88■□□□□ 0.13
TPM3-206ENST00000330188 CES2O00748 559 aa15.88■□□□□ 0.13
TPM3-206ENST00000330188 EVI5O60447 810 aa15.88■□□□□ 0.13
TPM3-206ENST00000330188 ALAS1P13196 640 aa15.88■□□□□ 0.13
TPM3-206ENST00000330188 SOX5P35711 763 aa15.88■□□□□ 0.13
TPM3-206ENST00000330188 LMAN1P49257 510 aa15.88■□□□□ 0.13
TPM3-206ENST00000330188 DGKZQ13574 1117 aa15.88■□□□□ 0.13
TPM3-206ENST00000330188 TNIP1Q15025 636 aa15.88■□□□□ 0.13
TPM3-206ENST00000330188 IFI16Q16666 785 aaKnown RBP15.88■□□□□ 0.13
TPM3-206ENST00000330188 MUM1L1Q5H9M0 696 aa15.88■□□□□ 0.13
TPM3-206ENST00000330188 PCNX4Q63HM2 1172 aa15.88■□□□□ 0.13
TPM3-206ENST00000330188 CIAPIN1Q6FI81 312 aa15.88■□□□□ 0.13
TPM3-206ENST00000330188 SYTL5Q8TDW5 730 aaPredicted RBP15.88■□□□□ 0.13
TPM3-206ENST00000330188 PKNOX2Q96KN3 472 aa15.88■□□□□ 0.13
TPM3-206ENST00000330188 KIAA1683Q9H0B3 1180 aa15.88■□□□□ 0.13
TPM3-206ENST00000330188 SLC38A10Q9HBR0 1119 aa15.88■□□□□ 0.13
TPM3-206ENST00000330188 RAVER2Q9HCJ3 691 aaKnown RBP15.88■□□□□ 0.13
TPM3-206ENST00000330188 DBR1Q9UK59 544 aaKnown RBP15.88■□□□□ 0.13
TPM3-206ENST00000330188 K7ENM7 598 aa15.87■□□□□ 0.13
TPM3-206ENST00000330188 AGPSO00116 658 aa15.87■□□□□ 0.13
TPM3-206ENST00000330188 RNF40O75150 1001 aa15.87■□□□□ 0.13
TPM3-206ENST00000330188 H2AFZP0C0S5 128 aa15.87■□□□□ 0.13
TPM3-206ENST00000330188 NOP2P46087 812 aaKnown RBP15.87■□□□□ 0.13
TPM3-206ENST00000330188 BFSP1Q12934 665 aa15.87■□□□□ 0.13
TPM3-206ENST00000330188 MYBPC2Q14324 1141 aa15.87■□□□□ 0.13
TPM3-206ENST00000330188 H2AFVQ71UI9 128 aa15.87■□□□□ 0.13
TPM3-206ENST00000330188 SND1Q7KZF4 910 aaKnown RBP eCLIP15.87■□□□□ 0.13
TPM3-206ENST00000330188 MAEAQ7L5Y9 396 aa15.87■□□□□ 0.13
TPM3-206ENST00000330188 SYCP3Q8IZU3 236 aa15.87■□□□□ 0.13
TPM3-206ENST00000330188 LNX1Q8TBB1 728 aaPredicted RBP15.87■□□□□ 0.13
TPM3-206ENST00000330188 STK33Q9BYT3 514 aa15.87■□□□□ 0.13
TPM3-206ENST00000330188 GPR88Q9GZN0 384 aa15.87■□□□□ 0.13
TPM3-206ENST00000330188 INTS2Q9H0H0 1204 aaKnown RBP15.87■□□□□ 0.13
TPM3-206ENST00000330188 DNAJC12Q9UKB3 198 aa15.87■□□□□ 0.13
TPM3-206ENST00000330188 INTUQ9ULD6 942 aa15.87■□□□□ 0.13
TPM3-206ENST00000330188 EXOC3O60645 756 aa15.86■□□□□ 0.13
TPM3-206ENST00000330188 KIF4AO95239 1232 aa15.86■□□□□ 0.13
TPM3-206ENST00000330188 RARRES1P49788 294 aa15.86■□□□□ 0.13
TPM3-206ENST00000330188 EPHB4P54760 987 aa15.86■□□□□ 0.13
TPM3-206ENST00000330188 PLS1Q14651 629 aa15.86■□□□□ 0.13
TPM3-206ENST00000330188 DRAP1Q14919 205 aaPredicted RBP15.86■□□□□ 0.13
TPM3-206ENST00000330188 RPS6KA1Q15418 735 aa15.86■□□□□ 0.13
TPM3-206ENST00000330188 TPCN2Q8NHX9 752 aa15.86■□□□□ 0.13
TPM3-206ENST00000330188 SLC30A5Q8TAD4 765 aa15.86■□□□□ 0.13
TPM3-206ENST00000330188 GOLPH3Q9H4A6 298 aa15.86■□□□□ 0.13
TPM3-206ENST00000330188 A0A0A6YYK5 440 aaPredicted RBP15.86■□□□□ 0.13
TPM3-206ENST00000330188 EGFRP00533 1210 aa15.86■□□□□ 0.13
TPM3-206ENST00000330188 MAPTP10636 758 aaKnown RBP15.86■□□□□ 0.13
TPM3-206ENST00000330188 GGCXP38435 758 aa15.86■□□□□ 0.13
TPM3-206ENST00000330188 MYL7Q01449 175 aa15.86■□□□□ 0.13
TPM3-206ENST00000330188 SPP2Q13103 211 aa15.86■□□□□ 0.13
TPM3-206ENST00000330188 U2AF1L4Q8WU68 220 aaKnown RBP15.86■□□□□ 0.13
TPM3-206ENST00000330188 RIN2Q8WYP3 895 aaPredicted RBP15.86■□□□□ 0.13
TPM3-206ENST00000330188 TAF4BQ92750 862 aa15.86■□□□□ 0.13
TPM3-206ENST00000330188 TAAR1Q96RJ0 339 aa15.86■□□□□ 0.13
TPM3-206ENST00000330188 HOMER2Q9NSB8 354 aa15.86■□□□□ 0.13
TPM3-206ENST00000330188 LARSQ9P2J5 1176 aaKnown RBP15.86■□□□□ 0.13
TPM3-206ENST00000330188 PARP14Q460N5 1801 aa15.85■□□□□ 0.13
TPM3-206ENST00000330188 LYPLA2O95372 231 aa15.85■□□□□ 0.13
TPM3-206ENST00000330188 GLI1P08151 1106 aa15.85■□□□□ 0.13
TPM3-206ENST00000330188 ZBTB48P10074 688 aaPredicted RBP15.85■□□□□ 0.13
TPM3-206ENST00000330188 QARSP47897 775 aaKnown RBP15.85■□□□□ 0.13
TPM3-206ENST00000330188 MTMR1Q13613 665 aa15.85■□□□□ 0.13
TPM3-206ENST00000330188 EMBQ6PCB8 327 aa15.85■□□□□ 0.13
TPM3-206ENST00000330188 USP38Q8NB14 1042 aa15.85■□□□□ 0.13
TPM3-206ENST00000330188 SYT11Q9BT88 431 aa15.85■□□□□ 0.13
TPM3-206ENST00000330188 FAM204AQ9H8W3 233 aa15.85■□□□□ 0.13
TPM3-206ENST00000330188 GDF3Q9NR23 364 aa15.85■□□□□ 0.13
TPM3-206ENST00000330188 MAP3K20Q9NYL2 800 aaKnown RBP15.85■□□□□ 0.13
TPM3-206ENST00000330188 APEX2Q9UBZ4 518 aa15.85■□□□□ 0.13
TPM3-206ENST00000330188 SAMM50Q9Y512 469 aa15.85■□□□□ 0.13
TPM3-206ENST00000330188 KCNK3O14649 394 aa15.85■□□□□ 0.13
TPM3-206ENST00000330188 EIF2AK2P19525 551 aaKnown RBP15.85■□□□□ 0.13
TPM3-206ENST00000330188 RPS6P62753 249 aaKnown RBP15.85■□□□□ 0.13
TPM3-206ENST00000330188 ALCAMQ13740 583 aa15.85■□□□□ 0.13
TPM3-206ENST00000330188 PGM5Q15124 567 aa15.85■□□□□ 0.13
TPM3-206ENST00000330188 SLFN11Q7Z7L1 901 aa15.85■□□□□ 0.13
TPM3-206ENST00000330188 RDH13Q8NBN7 331 aa15.85■□□□□ 0.13
TPM3-206ENST00000330188 CAVIN3Q969G5 261 aa15.85■□□□□ 0.13
TPM3-206ENST00000330188 PBKQ96KB5 322 aa15.85■□□□□ 0.13
TPM3-206ENST00000330188 TMEM206Q9H813 350 aa15.85■□□□□ 0.13
TPM3-206ENST00000330188 TMEM59LQ9UK28 342 aa15.85■□□□□ 0.13
TPM3-206ENST00000330188 PPP1R9AQ9ULJ8 1098 aa15.85■□□□□ 0.13
TPM3-206ENST00000330188 DAAM1Q9Y4D1 1078 aa15.85■□□□□ 0.13
TPM3-206ENST00000330188 TISP43B9A030 160 aa15.84■□□□□ 0.13
TPM3-206ENST00000330188 HEXIM1O94992 359 aaKnown RBP15.84■□□□□ 0.13
TPM3-206ENST00000330188 PLS3P13797 630 aa15.84■□□□□ 0.13
TPM3-206ENST00000330188 LMNB1P20700 586 aa15.84■□□□□ 0.13
TPM3-206ENST00000330188 GALCP54803 685 aa15.84■□□□□ 0.13
TPM3-206ENST00000330188 ZNF280AP59817 542 aaPredicted RBP15.84■□□□□ 0.13
TPM3-206ENST00000330188 RNASE9P60153 205 aaKnown RBP15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms