RNA–Protein interactions for RNA: ENST00000329970.7

GTF3C6-201, Transcript of general transcription factor IIIC subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C6, Length 952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C6-201ENST00000329970 GTF3C6Q969F1 213 aa15.26■□□□□ 0.03
GTF3C6-201ENST00000329970 PPP1R16BQ96T49 567 aa15.26■□□□□ 0.03
GTF3C6-201ENST00000329970 JPH2Q9BR39 696 aaPredicted RBP15.26■□□□□ 0.03
GTF3C6-201ENST00000329970 ATP6V0A4Q9HBG4 840 aa15.26■□□□□ 0.03
GTF3C6-201ENST00000329970 ALG13Q9NP73 1137 aaKnown RBP15.26■□□□□ 0.03
GTF3C6-201ENST00000329970 AAASQ9NRG9 546 aa15.26■□□□□ 0.03
GTF3C6-201ENST00000329970 ORC3Q9UBD5 711 aaPredicted RBP15.26■□□□□ 0.03
GTF3C6-201ENST00000329970 SEPT9Q9UHD8 586 aaPredicted RBP15.26■□□□□ 0.03
GTF3C6-201ENST00000329970 VAV3Q9UKW4 847 aa15.26■□□□□ 0.03
GTF3C6-201ENST00000329970 MAFO75444 373 aaPredicted RBP15.25■□□□□ 0.03
GTF3C6-201ENST00000329970 FDPSP14324 419 aaKnown RBP15.25■□□□□ 0.03
GTF3C6-201ENST00000329970 IL9P15248 144 aa15.25■□□□□ 0.03
GTF3C6-201ENST00000329970 DNAJB1P25685 340 aa15.25■□□□□ 0.03
GTF3C6-201ENST00000329970 LTBRP36941 435 aa15.25■□□□□ 0.03
GTF3C6-201ENST00000329970 GATMP50440 423 aa15.25■□□□□ 0.03
GTF3C6-201ENST00000329970 DNM2P50570 870 aa15.25■□□□□ 0.03
GTF3C6-201ENST00000329970 ZNF410Q86VK4 478 aa15.25■□□□□ 0.03
GTF3C6-201ENST00000329970 EXOC8Q8IYI6 725 aa15.25■□□□□ 0.03
GTF3C6-201ENST00000329970 POF1BQ8WVV4 589 aa15.25■□□□□ 0.03
GTF3C6-201ENST00000329970 TNFRSF25Q93038 417 aa15.25■□□□□ 0.03
GTF3C6-201ENST00000329970 TRAIPQ9BWF2 469 aa15.25■□□□□ 0.03
GTF3C6-201ENST00000329970 TMEM117Q9H0C3 514 aa15.25■□□□□ 0.03
GTF3C6-201ENST00000329970 CHST12Q9NRB3 414 aa15.25■□□□□ 0.03
GTF3C6-201ENST00000329970 CLDND1Q9NY35 253 aa15.25■□□□□ 0.03
GTF3C6-201ENST00000329970 PRKAG3Q9UGI9 489 aa15.25■□□□□ 0.03
GTF3C6-201ENST00000329970 LZTS1Q9Y250 596 aa15.25■□□□□ 0.03
GTF3C6-201ENST00000329970 PCDHB12Q9Y5F1 795 aa15.25■□□□□ 0.03
GTF3C6-201ENST00000329970 A0A0U1RQF3 1178 aa15.24■□□□□ 0.03
GTF3C6-201ENST00000329970 FSD2A1L4K1 749 aa15.24■□□□□ 0.03
GTF3C6-201ENST00000329970 TBKBP1A7MCY6 615 aa15.24■□□□□ 0.03
GTF3C6-201ENST00000329970 EML1O00423 815 aa15.24■□□□□ 0.03
GTF3C6-201ENST00000329970 EOMESO95936 686 aa15.24■□□□□ 0.03
GTF3C6-201ENST00000329970 P4HBP07237 508 aaKnown RBP15.24■□□□□ 0.03
GTF3C6-201ENST00000329970 LAG3P18627 525 aa15.24■□□□□ 0.03
GTF3C6-201ENST00000329970 QARSP47897 775 aaKnown RBP15.24■□□□□ 0.03
GTF3C6-201ENST00000329970 ME3Q16798 604 aa15.24■□□□□ 0.03
GTF3C6-201ENST00000329970 MTERF2Q49AM1 385 aa15.24■□□□□ 0.03
GTF3C6-201ENST00000329970 FAM102BQ5T8I3 360 aa15.24■□□□□ 0.03
GTF3C6-201ENST00000329970 PDE12Q6L8Q7 609 aaKnown RBP15.24■□□□□ 0.03
GTF3C6-201ENST00000329970 PIK3AP1Q6ZUJ8 805 aa15.24■□□□□ 0.03
GTF3C6-201ENST00000329970 ANO5Q75V66 913 aa15.24■□□□□ 0.03
GTF3C6-201ENST00000329970 ECHDC2Q86YB7 292 aa15.24■□□□□ 0.03
GTF3C6-201ENST00000329970 SLFN12Q8IYM2 578 aa15.24■□□□□ 0.03
GTF3C6-201ENST00000329970 OXER1Q8TDS5 423 aa15.24■□□□□ 0.03
GTF3C6-201ENST00000329970 HAS1Q92839 578 aa15.24■□□□□ 0.03
GTF3C6-201ENST00000329970 GCOM2Q9BZD3 368 aaPredicted RBP15.24■□□□□ 0.03
GTF3C6-201ENST00000329970 INO80BQ9C086 356 aaPredicted RBP15.24■□□□□ 0.03
GTF3C6-201ENST00000329970 CWH43Q9H720 699 aa15.24■□□□□ 0.03
GTF3C6-201ENST00000329970 DACT1Q9NYF0 836 aa15.24■□□□□ 0.03
GTF3C6-201ENST00000329970 H3BQ06 376 aaPredicted RBP15.23■□□□□ 0.03
GTF3C6-201ENST00000329970 CCNT1O60563 726 aaKnown RBP15.23■□□□□ 0.03
GTF3C6-201ENST00000329970 KRT2P35908 639 aa15.23■□□□□ 0.03
GTF3C6-201ENST00000329970 PLCB3Q01970 1234 aa15.23■□□□□ 0.03
GTF3C6-201ENST00000329970 SPIRE1Q08AE8 756 aa15.23■□□□□ 0.03
GTF3C6-201ENST00000329970 ADAM15Q13444 863 aa15.23■□□□□ 0.03
GTF3C6-201ENST00000329970 DRP2Q13474 957 aa15.23■□□□□ 0.03
GTF3C6-201ENST00000329970 EPHA7Q15375 998 aa15.23■□□□□ 0.03
GTF3C6-201ENST00000329970 ZNF598Q86UK7 904 aaKnown RBP15.23■□□□□ 0.03
GTF3C6-201ENST00000329970 C4orf19Q8IY42 314 aa15.23■□□□□ 0.03
GTF3C6-201ENST00000329970 LRRC43Q8N309 656 aa15.23■□□□□ 0.03
GTF3C6-201ENST00000329970 EFHBQ8N7U6 833 aa15.23■□□□□ 0.03
GTF3C6-201ENST00000329970 COLGALT1Q8NBJ5 622 aa15.23■□□□□ 0.03
GTF3C6-201ENST00000329970 NSUN7Q8NE18 718 aaKnown RBP15.23■□□□□ 0.03
GTF3C6-201ENST00000329970 NLRP7Q8WX94 980 aa15.23■□□□□ 0.03
GTF3C6-201ENST00000329970 CASD1Q96PB1 797 aa15.23■□□□□ 0.03
GTF3C6-201ENST00000329970 BRMS1Q9HCU9 246 aa15.23■□□□□ 0.03
GTF3C6-201ENST00000329970 CYP26B1Q9NR63 512 aa15.23■□□□□ 0.03
GTF3C6-201ENST00000329970 RNF19AQ9NV58 838 aa15.23■□□□□ 0.03
GTF3C6-201ENST00000329970 TYW1Q9NV66 732 aaKnown RBP15.23■□□□□ 0.03
GTF3C6-201ENST00000329970 DDX11L8A8MPP1 907 aa15.22■□□□□ 0.03
GTF3C6-201ENST00000329970 PI4K2BG5E9Z4 385 aa15.22■□□□□ 0.03
GTF3C6-201ENST00000329970 GAS2O43903 313 aaKnown RBP15.22■□□□□ 0.03
GTF3C6-201ENST00000329970 FGF18O76093 207 aa15.22■□□□□ 0.03
GTF3C6-201ENST00000329970 LARGE1O95461 756 aa15.22■□□□□ 0.03
GTF3C6-201ENST00000329970 FGFR1P11362 822 aa15.22■□□□□ 0.03
GTF3C6-201ENST00000329970 SFPQP23246 707 aaKnown RBP eCLIP15.22■□□□□ 0.03
GTF3C6-201ENST00000329970 SMAD2Q15796 467 aaKnown RBP15.22■□□□□ 0.03
GTF3C6-201ENST00000329970 EARS2Q5JPH6 523 aaKnown RBP15.22■□□□□ 0.03
GTF3C6-201ENST00000329970 GJD3Q8N144 294 aa15.22■□□□□ 0.03
GTF3C6-201ENST00000329970 SCLT1Q96NL6 688 aa15.22■□□□□ 0.03
GTF3C6-201ENST00000329970 DHX33Q9H6R0 707 aaKnown RBP15.22■□□□□ 0.03
GTF3C6-201ENST00000329970 CD320Q9NPF0 282 aa15.22■□□□□ 0.03
GTF3C6-201ENST00000329970 TLR9Q9NR96 1032 aa15.22■□□□□ 0.03
GTF3C6-201ENST00000329970 GJB4Q9NTQ9 266 aa15.22■□□□□ 0.03
GTF3C6-201ENST00000329970 C5orf42Q9H799 3197 aa15.22■□□□□ 0.03
GTF3C6-201ENST00000329970 A0A087WZ62 844 aa15.21■□□□□ 0.03
GTF3C6-201ENST00000329970 CARNS1A5YM72 827 aa15.21■□□□□ 0.03
GTF3C6-201ENST00000329970 TMEM150BA6NC51 233 aa15.21■□□□□ 0.03
GTF3C6-201ENST00000329970 C19orf67A6NJJ6 358 aa15.21■□□□□ 0.03
GTF3C6-201ENST00000329970 FSCN2O14926 492 aa15.21■□□□□ 0.03
GTF3C6-201ENST00000329970 MBTPS2O43462 519 aa15.21■□□□□ 0.03
GTF3C6-201ENST00000329970 TBX10O75333 385 aa15.21■□□□□ 0.03
GTF3C6-201ENST00000329970 BAG4O95429 457 aaKnown RBP15.21■□□□□ 0.03
GTF3C6-201ENST00000329970 EYA4O95677 639 aa15.21■□□□□ 0.03
GTF3C6-201ENST00000329970 ATF7P17544 494 aaPredicted RBP15.21■□□□□ 0.03
GTF3C6-201ENST00000329970 IRS1P35568 1242 aa15.21■□□□□ 0.03
GTF3C6-201ENST00000329970 PPM1AP35813 382 aa15.21■□□□□ 0.03
GTF3C6-201ENST00000329970 RFC5P40937 340 aa15.21■□□□□ 0.03
GTF3C6-201ENST00000329970 NEK4P51957 841 aa15.21■□□□□ 0.03
GTF3C6-201ENST00000329970 SMAD4Q13485 552 aaKnown RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms