RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 PTPN18Q99952 460 aa22.25■■□□□ 1.15
RIPPLY3-201ENST00000329553 ZNF302Q9NR11 478 aa22.25■■□□□ 1.15
RIPPLY3-201ENST00000329553 ZNF446Q9NWS9 450 aa22.25■■□□□ 1.15
RIPPLY3-201ENST00000329553 SEPT9Q9UHD8 586 aaPredicted RBP22.25■■□□□ 1.15
RIPPLY3-201ENST00000329553 GSTTP1A0A1W2PQM5 241 aa22.25■■□□□ 1.15
RIPPLY3-201ENST00000329553 ARIH2O95376 493 aa22.25■■□□□ 1.15
RIPPLY3-201ENST00000329553 ZBTB48P10074 688 aaPredicted RBP22.25■■□□□ 1.15
RIPPLY3-201ENST00000329553 PEX3P56589 373 aa22.25■■□□□ 1.15
RIPPLY3-201ENST00000329553 CCNA1P78396 465 aa22.25■■□□□ 1.15
RIPPLY3-201ENST00000329553 KCNMA1Q12791 1236 aa22.25■■□□□ 1.15
RIPPLY3-201ENST00000329553 NFIL3Q16649 462 aa22.25■■□□□ 1.15
RIPPLY3-201ENST00000329553 FIGNQ5HY92 759 aa22.25■■□□□ 1.15
RIPPLY3-201ENST00000329553 KRT222Q8N1A0 295 aa22.25■■□□□ 1.15
RIPPLY3-201ENST00000329553 GBP3Q9H0R5 595 aa22.25■■□□□ 1.15
RIPPLY3-201ENST00000329553 XKR3Q5GH77 459 aa22.24■■□□□ 1.15
RIPPLY3-201ENST00000329553 DNAJC7Q99615 494 aa22.24■■□□□ 1.15
RIPPLY3-201ENST00000329553 MMRN2Q9H8L6 949 aa22.24■■□□□ 1.15
RIPPLY3-201ENST00000329553 PDLIM7Q9NR12 457 aa22.24■■□□□ 1.15
RIPPLY3-201ENST00000329553 CYP26B1Q9NR63 512 aa22.24■■□□□ 1.15
RIPPLY3-201ENST00000329553 ARMCX3Q9UH62 379 aaPredicted RBP22.24■■□□□ 1.15
RIPPLY3-201ENST00000329553 FAM184BQ9ULE4 1060 aa22.24■■□□□ 1.15
RIPPLY3-201ENST00000329553 MCM3APO60318 1980 aa22.24■■□□□ 1.15
RIPPLY3-201ENST00000329553 IGKV6D-21A0A0A0MT36 114 aa22.23■■□□□ 1.15
RIPPLY3-201ENST00000329553 EPHB6O15197 1021 aa22.23■■□□□ 1.15
RIPPLY3-201ENST00000329553 GGPS1O95749 300 aa22.23■■□□□ 1.15
RIPPLY3-201ENST00000329553 SOX10P56693 466 aa22.23■■□□□ 1.15
RIPPLY3-201ENST00000329553 TMTC1Q8IUR5 882 aa22.23■■□□□ 1.15
RIPPLY3-201ENST00000329553 MORC4Q8TE76 937 aa22.23■■□□□ 1.15
RIPPLY3-201ENST00000329553 AGPAT3Q9NRZ7 376 aa22.23■■□□□ 1.15
RIPPLY3-201ENST00000329553 URI1O94763 535 aaPredicted RBP22.23■■□□□ 1.15
RIPPLY3-201ENST00000329553 GCLCP48506 637 aaPredicted RBP22.23■■□□□ 1.15
RIPPLY3-201ENST00000329553 GABPB1Q06547 395 aaPredicted RBP22.23■■□□□ 1.15
RIPPLY3-201ENST00000329553 HS2ST1Q7LGA3 356 aa22.23■■□□□ 1.15
RIPPLY3-201ENST00000329553 HAUS6Q7Z4H7 955 aa22.23■■□□□ 1.15
RIPPLY3-201ENST00000329553 SYCP3Q8IZU3 236 aa22.23■■□□□ 1.15
RIPPLY3-201ENST00000329553 PCYT2Q99447 389 aa22.23■■□□□ 1.15
RIPPLY3-201ENST00000329553 DESI2Q9BSY9 194 aa22.23■■□□□ 1.15
RIPPLY3-201ENST00000329553 FAM207AQ9NSI2 230 aaPredicted RBP22.23■■□□□ 1.15
RIPPLY3-201ENST00000329553 SLC16A4O15374 487 aa22.22■■□□□ 1.15
RIPPLY3-201ENST00000329553 SLC16A3O15427 465 aaKnown RBP22.22■■□□□ 1.15
RIPPLY3-201ENST00000329553 KCNH2Q12809 1159 aa22.22■■□□□ 1.15
RIPPLY3-201ENST00000329553 ALCAMQ13740 583 aa22.22■■□□□ 1.15
RIPPLY3-201ENST00000329553 ARHGAP29Q52LW3 1261 aa22.22■■□□□ 1.15
RIPPLY3-201ENST00000329553 METTL7BQ6UX53 244 aa22.22■■□□□ 1.15
RIPPLY3-201ENST00000329553 FBXO16Q8IX29 292 aaPredicted RBP22.22■■□□□ 1.15
RIPPLY3-201ENST00000329553 CHP1Q99653 195 aa22.22■■□□□ 1.15
RIPPLY3-201ENST00000329553 ST6GALNAC4Q9H4F1 302 aa22.22■■□□□ 1.15
RIPPLY3-201ENST00000329553 DMAC2Q9NW81 257 aa22.22■■□□□ 1.15
RIPPLY3-201ENST00000329553 MORF4L1Q9UBU8 362 aa22.22■■□□□ 1.15
RIPPLY3-201ENST00000329553 A0A1W2PQJ5 194 aa22.22■■□□□ 1.15
RIPPLY3-201ENST00000329553 TADA3O75528 432 aa22.22■■□□□ 1.15
RIPPLY3-201ENST00000329553 DGAT1O75907 488 aa22.22■■□□□ 1.15
RIPPLY3-201ENST00000329553 EPB41P11171 864 aaKnown RBP22.22■■□□□ 1.15
RIPPLY3-201ENST00000329553 NCKAP1LP55160 1127 aa22.22■■□□□ 1.15
RIPPLY3-201ENST00000329553 ZBED6P86452 979 aa22.22■■□□□ 1.15
RIPPLY3-201ENST00000329553 GTF2BQ00403 316 aa22.22■■□□□ 1.15
RIPPLY3-201ENST00000329553 MTERF2Q49AM1 385 aa22.22■■□□□ 1.15
RIPPLY3-201ENST00000329553 WDR59Q6PJI9 974 aa22.22■■□□□ 1.15
RIPPLY3-201ENST00000329553 CYP26C1Q6V0L0 522 aa22.22■■□□□ 1.15
RIPPLY3-201ENST00000329553 MLXIPQ9HAP2 919 aa22.22■■□□□ 1.15
RIPPLY3-201ENST00000329553 XPNPEP1Q9NQW7 623 aa22.22■■□□□ 1.15
RIPPLY3-201ENST00000329553 ARID2Q68CP9 1835 aa22.21■■□□□ 1.15
RIPPLY3-201ENST00000329553 HUNKP57058 714 aa22.21■■□□□ 1.15
RIPPLY3-201ENST00000329553 KCNV1Q6PIU1 500 aa22.21■■□□□ 1.15
RIPPLY3-201ENST00000329553 SEPT1Q8WYJ6 367 aa22.21■■□□□ 1.15
RIPPLY3-201ENST00000329553 BSNDQ8WZ55 320 aa22.21■■□□□ 1.15
RIPPLY3-201ENST00000329553 BORCS6Q96GS4 357 aa22.21■■□□□ 1.15
RIPPLY3-201ENST00000329553 METTL14Q9HCE5 456 aaKnown RBP22.21■■□□□ 1.15
RIPPLY3-201ENST00000329553 EFCAB8A8MWE9 144 aa22.21■■□□□ 1.15
RIPPLY3-201ENST00000329553 OATP04181 439 aa22.21■■□□□ 1.15
RIPPLY3-201ENST00000329553 NPTX2P47972 431 aa22.21■■□□□ 1.15
RIPPLY3-201ENST00000329553 UBXN4Q92575 508 aa22.21■■□□□ 1.15
RIPPLY3-201ENST00000329553 KIFAP3Q92845 792 aa22.21■■□□□ 1.15
RIPPLY3-201ENST00000329553 ACCSQ96QU6 501 aa22.21■■□□□ 1.15
RIPPLY3-201ENST00000329553 WDR24Q96S15 920 aa22.21■■□□□ 1.15
RIPPLY3-201ENST00000329553 TMEM206Q9H813 350 aa22.21■■□□□ 1.15
RIPPLY3-201ENST00000329553 CCDC169A6NNP5 214 aa22.2■■□□□ 1.14
RIPPLY3-201ENST00000329553 ADORA2AP29274 412 aa22.2■■□□□ 1.14
RIPPLY3-201ENST00000329553 PSMC2P35998 433 aaKnown RBP22.2■■□□□ 1.14
RIPPLY3-201ENST00000329553 CLCN6P51797 869 aa22.2■■□□□ 1.14
RIPPLY3-201ENST00000329553 TSR1Q2NL82 804 aaKnown RBP22.2■■□□□ 1.14
RIPPLY3-201ENST00000329553 ZNF792Q3KQV3 632 aa22.2■■□□□ 1.14
RIPPLY3-201ENST00000329553 MNS1Q8NEH6 495 aa22.2■■□□□ 1.14
RIPPLY3-201ENST00000329553 GOLGA5Q8TBA6 731 aa22.2■■□□□ 1.14
RIPPLY3-201ENST00000329553 IQCDQ96DY2 449 aa22.2■■□□□ 1.14
RIPPLY3-201ENST00000329553 CRACR2AQ9BSW2 395 aa22.2■■□□□ 1.14
RIPPLY3-201ENST00000329553 ADGRG1Q9Y653 693 aa22.2■■□□□ 1.14
RIPPLY3-201ENST00000329553 LOC102724159A0A0B4J2E5 919 aa22.19■■□□□ 1.14
RIPPLY3-201ENST00000329553 ASB14A6NK59 587 aa22.19■■□□□ 1.14
RIPPLY3-201ENST00000329553 XRCC5P13010 732 aaKnown RBP22.19■■□□□ 1.14
RIPPLY3-201ENST00000329553 CASQ1P31415 396 aa22.19■■□□□ 1.14
RIPPLY3-201ENST00000329553 CYP2J2P51589 502 aa22.19■■□□□ 1.14
RIPPLY3-201ENST00000329553 GNG11P61952 73 aa22.19■■□□□ 1.14
RIPPLY3-201ENST00000329553 PWP2Q15269 919 aaKnown RBP22.19■■□□□ 1.14
RIPPLY3-201ENST00000329553 CELF3Q5SZQ8 465 aaKnown RBP22.19■■□□□ 1.14
RIPPLY3-201ENST00000329553 TMEM63BQ5T3F8 832 aa22.19■■□□□ 1.14
RIPPLY3-201ENST00000329553 CHADLQ6NUI6 762 aa22.19■■□□□ 1.14
RIPPLY3-201ENST00000329553 CCDC62Q6P9F0 684 aa22.19■■□□□ 1.14
RIPPLY3-201ENST00000329553 MCPH1Q8NEM0 835 aa22.19■■□□□ 1.14
RIPPLY3-201ENST00000329553 CARD6Q9BX69 1037 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms