RNA–Protein interactions for RNA: ENST00000328863.8

CLRN1-203, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-203ENST00000328863 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.52■□□□□ 0.24
CLRN1-203ENST00000328863 Q7L0L9 218 aa16.52■□□□□ 0.24
CLRN1-203ENST00000328863 FAM228AQ86W67 206 aa16.52■□□□□ 0.24
CLRN1-203ENST00000328863 RHPN2Q8IUC4 686 aa16.52■□□□□ 0.24
CLRN1-203ENST00000328863 NLRP4Q96MN2 994 aa16.52■□□□□ 0.24
CLRN1-203ENST00000328863 GCOM2Q9BZD3 368 aaPredicted RBP16.52■□□□□ 0.24
CLRN1-203ENST00000328863 NKX2-4Q9H2Z4 354 aa16.52■□□□□ 0.24
CLRN1-203ENST00000328863 ERVK-5Q9HDB9 667 aa16.52■□□□□ 0.24
CLRN1-203ENST00000328863 DBR1Q9UK59 544 aaKnown RBP16.52■□□□□ 0.24
CLRN1-203ENST00000328863 NOC2LQ9Y3T9 749 aaKnown RBP16.52■□□□□ 0.24
CLRN1-203ENST00000328863 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.51■□□□□ 0.23
CLRN1-203ENST00000328863 ARHGEF35A5YM69 484 aa16.51■□□□□ 0.23
CLRN1-203ENST00000328863 USO1O60763 962 aaKnown RBP16.51■□□□□ 0.23
CLRN1-203ENST00000328863 CA3P07451 260 aa16.51■□□□□ 0.23
CLRN1-203ENST00000328863 EIF4BP23588 611 aaKnown RBP16.51■□□□□ 0.23
CLRN1-203ENST00000328863 BECN1Q14457 450 aa16.51■□□□□ 0.23
CLRN1-203ENST00000328863 SF3A1Q15459 793 aaKnown RBP16.51■□□□□ 0.23
CLRN1-203ENST00000328863 MCPH1Q8NEM0 835 aa16.51■□□□□ 0.23
CLRN1-203ENST00000328863 PIGOQ8TEQ8 1089 aa16.51■□□□□ 0.23
CLRN1-203ENST00000328863 AK8Q96MA6 479 aa16.51■□□□□ 0.23
CLRN1-203ENST00000328863 INO80BQ9C086 356 aaPredicted RBP16.51■□□□□ 0.23
CLRN1-203ENST00000328863 ADAMTS10Q9H324 1103 aa16.51■□□□□ 0.23
CLRN1-203ENST00000328863 C1orf112Q9NSG2 853 aa16.51■□□□□ 0.23
CLRN1-203ENST00000328863 RNF216Q9NWF9 866 aaPredicted RBP16.51■□□□□ 0.23
CLRN1-203ENST00000328863 YBX2Q9Y2T7 364 aaKnown RBP16.51■□□□□ 0.23
CLRN1-203ENST00000328863 DENND3A2RUS2 1198 aa16.5■□□□□ 0.23
CLRN1-203ENST00000328863 DARSP14868 501 aaKnown RBP16.5■□□□□ 0.23
CLRN1-203ENST00000328863 TFDP1Q14186 410 aa16.5■□□□□ 0.23
CLRN1-203ENST00000328863 MXD4Q14582 209 aaPredicted RBP16.5■□□□□ 0.23
CLRN1-203ENST00000328863 FAM117BQ6P1L5 589 aa16.5■□□□□ 0.23
CLRN1-203ENST00000328863 ZNF579Q8NAF0 562 aaKnown RBP16.5■□□□□ 0.23
CLRN1-203ENST00000328863 TMEM143Q96AN5 459 aa16.5■□□□□ 0.23
CLRN1-203ENST00000328863 CDK5RAP3Q96JB5 506 aa16.5■□□□□ 0.23
CLRN1-203ENST00000328863 FAM161BQ96MY7 647 aa16.5■□□□□ 0.23
CLRN1-203ENST00000328863 YME1L1Q96TA2 773 aa16.5■□□□□ 0.23
CLRN1-203ENST00000328863 RAD9AQ99638 391 aa16.5■□□□□ 0.23
CLRN1-203ENST00000328863 NT5C3AQ9H0P0 336 aa16.5■□□□□ 0.23
CLRN1-203ENST00000328863 TSPYL2Q9H2G4 693 aaPredicted RBP16.5■□□□□ 0.23
CLRN1-203ENST00000328863 TTYH1Q9H313 450 aaPredicted RBP16.5■□□□□ 0.23
CLRN1-203ENST00000328863 ZNF576Q9H609 170 aa16.5■□□□□ 0.23
CLRN1-203ENST00000328863 CDHR5Q9HBB8 845 aa16.5■□□□□ 0.23
CLRN1-203ENST00000328863 DDX19AQ9NUU7 478 aaKnown RBP16.5■□□□□ 0.23
CLRN1-203ENST00000328863 ST3GAL5Q9UNP4 418 aa16.5■□□□□ 0.23
CLRN1-203ENST00000328863 INSL6Q9Y581 213 aa16.5■□□□□ 0.23
CLRN1-203ENST00000328863 A0A087WZ62 844 aa16.49■□□□□ 0.23
CLRN1-203ENST00000328863 ZBTB39O15060 712 aa16.49■□□□□ 0.23
CLRN1-203ENST00000328863 ASAP2O43150 1006 aa16.49■□□□□ 0.23
CLRN1-203ENST00000328863 PHKA2P46019 1235 aa16.49■□□□□ 0.23
CLRN1-203ENST00000328863 TMCO2Q7Z6W1 182 aaPredicted RBP16.49■□□□□ 0.23
CLRN1-203ENST00000328863 NPAS4Q8IUM7 802 aa16.49■□□□□ 0.23
CLRN1-203ENST00000328863 KCTD17Q8N5Z5 321 aa16.49■□□□□ 0.23
CLRN1-203ENST00000328863 LINC01599Q8WXQ3 324 aa16.49■□□□□ 0.23
CLRN1-203ENST00000328863 TOP1MTQ969P6 601 aa16.49■□□□□ 0.23
CLRN1-203ENST00000328863 ZNF668Q96K58 619 aaPredicted RBP16.49■□□□□ 0.23
CLRN1-203ENST00000328863 FDXACB1Q9BRP7 624 aaPredicted RBP16.49■□□□□ 0.23
CLRN1-203ENST00000328863 XPNPEP1Q9NQW7 623 aa16.49■□□□□ 0.23
CLRN1-203ENST00000328863 KIAA1024Q9UPX6 916 aa16.49■□□□□ 0.23
CLRN1-203ENST00000328863 PP2D1A8MPX8 630 aa16.48■□□□□ 0.23
CLRN1-203ENST00000328863 SLC26A4O43511 780 aa16.48■□□□□ 0.23
CLRN1-203ENST00000328863 UPP2O95045 317 aa16.48■□□□□ 0.23
CLRN1-203ENST00000328863 STAG3L1P0CL83 205 aa16.48■□□□□ 0.23
CLRN1-203ENST00000328863 MYOGP15173 224 aa16.48■□□□□ 0.23
CLRN1-203ENST00000328863 ZSCAN20P17040 1043 aaPredicted RBP16.48■□□□□ 0.23
CLRN1-203ENST00000328863 LAMTOR4Q0VGL1 99 aa16.48■□□□□ 0.23
CLRN1-203ENST00000328863 IL17AQ16552 155 aa16.48■□□□□ 0.23
CLRN1-203ENST00000328863 RASSF8Q8NHQ8 419 aa16.48■□□□□ 0.23
CLRN1-203ENST00000328863 POLR3FQ9H1D9 316 aaPredicted RBP16.48■□□□□ 0.23
CLRN1-203ENST00000328863 TMX1Q9H3N1 280 aa16.48■□□□□ 0.23
CLRN1-203ENST00000328863 MTMR10Q9NXD2 777 aa16.48■□□□□ 0.23
CLRN1-203ENST00000328863 MYH11P35749 1972 aa16.47■□□□□ 0.23
CLRN1-203ENST00000328863 ADGRA3Q8IWK6 1321 aa16.47■□□□□ 0.23
CLRN1-203ENST00000328863 KIAA1671Q9BY89 1806 aa16.47■□□□□ 0.23
CLRN1-203ENST00000328863 LONP1P36776 959 aaKnown RBP16.47■□□□□ 0.23
CLRN1-203ENST00000328863 SARSP49591 514 aaKnown RBP16.47■□□□□ 0.23
CLRN1-203ENST00000328863 HTRA4P83105 476 aaPredicted RBP16.47■□□□□ 0.23
CLRN1-203ENST00000328863 ZRSR1Q15695 479 aaKnown RBP16.47■□□□□ 0.23
CLRN1-203ENST00000328863 PADI6Q6TGC4 694 aa16.47■□□□□ 0.23
CLRN1-203ENST00000328863 SRGAP1Q7Z6B7 1085 aa16.47■□□□□ 0.23
CLRN1-203ENST00000328863 KSR1Q8IVT5 923 aa16.47■□□□□ 0.23
CLRN1-203ENST00000328863 RNF149Q8NC42 400 aa16.47■□□□□ 0.23
CLRN1-203ENST00000328863 SPRYD3Q8NCJ5 442 aa16.47■□□□□ 0.23
CLRN1-203ENST00000328863 PRPF31Q8WWY3 499 aaKnown RBP16.47■□□□□ 0.23
CLRN1-203ENST00000328863 CALML4Q96GE6 196 aa16.47■□□□□ 0.23
CLRN1-203ENST00000328863 ZNF396Q96N95 335 aaPredicted RBP16.47■□□□□ 0.23
CLRN1-203ENST00000328863 ADAM2Q99965 735 aa16.47■□□□□ 0.23
CLRN1-203ENST00000328863 BHMT2Q9H2M3 363 aa16.47■□□□□ 0.23
CLRN1-203ENST00000328863 SEMA6BQ9H3T3 888 aa16.47■□□□□ 0.23
CLRN1-203ENST00000328863 DACT1Q9NYF0 836 aa16.47■□□□□ 0.23
CLRN1-203ENST00000328863 LRFN2Q9ULH4 789 aa16.47■□□□□ 0.23
CLRN1-203ENST00000328863 DNM3Q9UQ16 869 aa16.47■□□□□ 0.23
CLRN1-203ENST00000328863 A0A0C4DFX4 3053 aa16.47■□□□□ 0.23
CLRN1-203ENST00000328863 FNDC1Q4ZHG4 1894 aaPredicted RBP16.46■□□□□ 0.23
CLRN1-203ENST00000328863 LCHNA4D1U4 455 aa16.46■□□□□ 0.23
CLRN1-203ENST00000328863 ENPP3O14638 875 aa16.46■□□□□ 0.23
CLRN1-203ENST00000328863 ERLIN2O94905 339 aa16.46■□□□□ 0.23
CLRN1-203ENST00000328863 EYA4O95677 639 aa16.46■□□□□ 0.23
CLRN1-203ENST00000328863 F13A1P00488 732 aa16.46■□□□□ 0.23
CLRN1-203ENST00000328863 ZSCAN22P10073 491 aaPredicted RBP16.46■□□□□ 0.23
CLRN1-203ENST00000328863 TXLNAP40222 546 aa16.46■□□□□ 0.23
CLRN1-203ENST00000328863 UBA7P41226 1012 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms