RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 HSD17B14Q9BPX1 270 aa15.28■□□□□ 0.04
ATP2C1-201ENST00000328560 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.28■□□□□ 0.045e-8■■■■□ 20.2
ATP2C1-201ENST00000328560 FBXO28Q9NVF7 368 aa15.28■□□□□ 0.04
ATP2C1-201ENST00000328560 AMFRQ9UKV5 643 aa15.28■□□□□ 0.04
ATP2C1-201ENST00000328560 TTI1O43156 1089 aa15.27■□□□□ 0.04
ATP2C1-201ENST00000328560 BUB1BO60566 1050 aaPredicted RBP15.27■□□□□ 0.04
ATP2C1-201ENST00000328560 FGGP02679 453 aa15.27■□□□□ 0.04
ATP2C1-201ENST00000328560 NR1D1P20393 614 aa15.27■□□□□ 0.04
ATP2C1-201ENST00000328560 TNFAIP3P21580 790 aa15.27■□□□□ 0.04
ATP2C1-201ENST00000328560 CIITAP33076 1130 aa15.27■□□□□ 0.04
ATP2C1-201ENST00000328560 CORO7P57737 925 aa15.27■□□□□ 0.04
ATP2C1-201ENST00000328560 LNX1Q8TBB1 728 aaPredicted RBP15.27■□□□□ 0.04
ATP2C1-201ENST00000328560 IGLV3-22A0A075B6J6 115 aa15.27■□□□□ 0.04
ATP2C1-201ENST00000328560 ARHGEF35A5YM69 484 aa15.27■□□□□ 0.04
ATP2C1-201ENST00000328560 TISP43B9A030 160 aa15.27■□□□□ 0.04
ATP2C1-201ENST00000328560 CTNNA1P35221 906 aaKnown RBP15.27■□□□□ 0.04
ATP2C1-201ENST00000328560 SOX5P35711 763 aa15.27■□□□□ 0.04
ATP2C1-201ENST00000328560 DLGAP5Q15398 846 aa15.27■□□□□ 0.04
ATP2C1-201ENST00000328560 C1orf186Q6ZWK4 172 aa15.27■□□□□ 0.04
ATP2C1-201ENST00000328560 SLC35G2Q8TBE7 412 aa15.27■□□□□ 0.04
ATP2C1-201ENST00000328560 PIK3R5Q8WYR1 880 aa15.27■□□□□ 0.04
ATP2C1-201ENST00000328560 MRIQ9BWK5 157 aa15.27■□□□□ 0.04
ATP2C1-201ENST00000328560 WRAP73Q9P2S5 460 aaPredicted RBP15.27■□□□□ 0.04
ATP2C1-201ENST00000328560 FAM169AQ9Y6X4 670 aa15.27■□□□□ 0.04
ATP2C1-201ENST00000328560 GRIN2DO15399 1336 aa15.27■□□□□ 0.04
ATP2C1-201ENST00000328560 SLC16A3O15427 465 aaKnown RBP15.27■□□□□ 0.03
ATP2C1-201ENST00000328560 MAGEA9P43362 315 aa15.27■□□□□ 0.03
ATP2C1-201ENST00000328560 SEC24CP53992 1094 aa15.27■□□□□ 0.03
ATP2C1-201ENST00000328560 NEUROG2Q9H2A3 272 aa15.27■□□□□ 0.03
ATP2C1-201ENST00000328560 SCAF8Q9UPN6 1271 aaKnown RBP15.27■□□□□ 0.03
ATP2C1-201ENST00000328560 SLC26A4O43511 780 aa15.26■□□□□ 0.03
ATP2C1-201ENST00000328560 C21orf2O43822 256 aa15.26■□□□□ 0.03
ATP2C1-201ENST00000328560 FLT3P36888 993 aa15.26■□□□□ 0.03
ATP2C1-201ENST00000328560 PRKCIP41743 596 aa15.26■□□□□ 0.03
ATP2C1-201ENST00000328560 OLFML3Q9NRN5 406 aa15.26■□□□□ 0.03
ATP2C1-201ENST00000328560 TAS2R14Q9NYV8 317 aa15.26■□□□□ 0.03
ATP2C1-201ENST00000328560 SMCHD1A6NHR9 2005 aa15.26■□□□□ 0.03
ATP2C1-201ENST00000328560 F8VZ95 297 aa15.26■□□□□ 0.03
ATP2C1-201ENST00000328560 HSD17B3P37058 310 aa15.26■□□□□ 0.03
ATP2C1-201ENST00000328560 PRELPP51888 382 aa15.26■□□□□ 0.03
ATP2C1-201ENST00000328560 MYL7Q01449 175 aa15.26■□□□□ 0.03
ATP2C1-201ENST00000328560 STYK1Q6J9G0 422 aa15.26■□□□□ 0.03
ATP2C1-201ENST00000328560 SCFD2Q8WU76 684 aa15.26■□□□□ 0.03
ATP2C1-201ENST00000328560 TRIM51Q9BSJ1 452 aa15.26■□□□□ 0.03
ATP2C1-201ENST00000328560 INTS2Q9H0H0 1204 aaKnown RBP15.26■□□□□ 0.03
ATP2C1-201ENST00000328560 ISCUQ9H1K1 167 aa15.26■□□□□ 0.03
ATP2C1-201ENST00000328560 AGPAT3Q9NRZ7 376 aa15.26■□□□□ 0.03
ATP2C1-201ENST00000328560 PPP1R9AQ9ULJ8 1098 aa15.26■□□□□ 0.03
ATP2C1-201ENST00000328560 JAM2P57087 298 aa15.26■□□□□ 0.03
ATP2C1-201ENST00000328560 BMT2Q1RMZ1 405 aa15.26■□□□□ 0.03
ATP2C1-201ENST00000328560 TTC31Q49AM3 519 aaPredicted RBP15.26■□□□□ 0.03
ATP2C1-201ENST00000328560 ZNF746Q6NUN9 644 aaPredicted RBP15.26■□□□□ 0.03
ATP2C1-201ENST00000328560 ZNF720Q7Z2F6 126 aa15.26■□□□□ 0.03
ATP2C1-201ENST00000328560 PALB2Q86YC2 1186 aa15.26■□□□□ 0.03
ATP2C1-201ENST00000328560 LARGE2Q8N3Y3 721 aa15.26■□□□□ 0.03
ATP2C1-201ENST00000328560 LXNQ9BS40 222 aa15.26■□□□□ 0.03
ATP2C1-201ENST00000328560 UNC45AQ9H3U1 944 aa15.26■□□□□ 0.03
ATP2C1-201ENST00000328560 GOPCQ9HD26 462 aa15.26■□□□□ 0.03
ATP2C1-201ENST00000328560 PPANQ9NQ55 473 aaKnown RBP15.26■□□□□ 0.03
ATP2C1-201ENST00000328560 NR2E1Q9Y466 385 aa15.26■□□□□ 0.03
ATP2C1-201ENST00000328560 STK24Q9Y6E0 443 aa15.26■□□□□ 0.03
ATP2C1-201ENST00000328560 K7ENM7 598 aa15.25■□□□□ 0.03
ATP2C1-201ENST00000328560 RAD17O75943 681 aa15.25■□□□□ 0.03
ATP2C1-201ENST00000328560 LLGL1Q15334 1064 aa15.25■□□□□ 0.03
ATP2C1-201ENST00000328560 CEP55Q53EZ4 464 aa15.25■□□□□ 0.03
ATP2C1-201ENST00000328560 NT5DC3Q86UY8 548 aa15.25■□□□□ 0.03
ATP2C1-201ENST00000328560 SYCE1Q8N0S2 351 aa15.25■□□□□ 0.03
ATP2C1-201ENST00000328560 ACTRT1Q8TDG2 376 aa15.25■□□□□ 0.03
ATP2C1-201ENST00000328560 AKT1S1Q96B36 256 aa15.25■□□□□ 0.03
ATP2C1-201ENST00000328560 ATP6V1G3Q96LB4 118 aa15.25■□□□□ 0.03
ATP2C1-201ENST00000328560 NACC1Q96RE7 527 aa15.25■□□□□ 0.03
ATP2C1-201ENST00000328560 EHMT1Q9H9B1 1298 aa15.25■□□□□ 0.03
ATP2C1-201ENST00000328560 FBXL5Q9UKA1 691 aa15.25■□□□□ 0.03
ATP2C1-201ENST00000328560 IGSF9BQ9UPX0 1349 aa15.25■□□□□ 0.03
ATP2C1-201ENST00000328560 ZMYM2Q9UBW7 1377 aa15.25■□□□□ 0.03
ATP2C1-201ENST00000328560 ENTPD3O75355 529 aa15.25■□□□□ 0.03
ATP2C1-201ENST00000328560 PSMD10O75832 226 aa15.25■□□□□ 0.03
ATP2C1-201ENST00000328560 MYZAPP0CAP1 466 aa15.25■□□□□ 0.03
ATP2C1-201ENST00000328560 STXBP4Q6ZWJ1 553 aa15.25■□□□□ 0.03
ATP2C1-201ENST00000328560 ARHGEF26Q96DR7 871 aa15.25■□□□□ 0.03
ATP2C1-201ENST00000328560 THAP2Q9H0W7 228 aa15.25■□□□□ 0.03
ATP2C1-201ENST00000328560 TUFT1Q9NNX1 390 aa15.25■□□□□ 0.03
ATP2C1-201ENST00000328560 TMOD4Q9NZQ9 345 aa15.25■□□□□ 0.03
ATP2C1-201ENST00000328560 HIP1RO75146 1068 aa15.25■□□□□ 0.03
ATP2C1-201ENST00000328560 CPXCR1Q8N123 301 aa15.25■□□□□ 0.03
ATP2C1-201ENST00000328560 CCDC26Q8TAB7 109 aa15.25■□□□□ 0.03
ATP2C1-201ENST00000328560 STK33Q9BYT3 514 aa15.25■□□□□ 0.03
ATP2C1-201ENST00000328560 UBE2TQ9NPD8 197 aaPredicted RBP15.25■□□□□ 0.03
ATP2C1-201ENST00000328560 HOMER2Q9NSB8 354 aa15.25■□□□□ 0.03
ATP2C1-201ENST00000328560 TMEM59LQ9UK28 342 aa15.25■□□□□ 0.03
ATP2C1-201ENST00000328560 ARFGEF1Q9Y6D6 1849 aa15.24■□□□□ 0.03
ATP2C1-201ENST00000328560 LY75O60449 1722 aa15.24■□□□□ 0.03
ATP2C1-201ENST00000328560 FOXN3O00409 490 aaPredicted RBP15.24■□□□□ 0.03
ATP2C1-201ENST00000328560 LMNB1P20700 586 aa15.24■□□□□ 0.03
ATP2C1-201ENST00000328560 LSP1P33241 339 aa15.24■□□□□ 0.03
ATP2C1-201ENST00000328560 ZNF772Q68DY9 489 aaPredicted RBP15.24■□□□□ 0.03
ATP2C1-201ENST00000328560 CDAN1Q8IWY9 1227 aa15.24■□□□□ 0.03
ATP2C1-201ENST00000328560 BTNL10A8MVZ5 291 aa15.24■□□□□ 0.03
ATP2C1-201ENST00000328560 IPO5O00410 1097 aaKnown RBP15.24■□□□□ 0.03
ATP2C1-201ENST00000328560 BACH1O14867 736 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms